| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
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The map label for this gene is fabZ [H]
Identifier: 118581425
GI number: 118581425
Start: 3300628
End: 3301071
Strand: Direct
Name: fabZ [H]
Synonym: Ppro_3020
Alternate gene names: 118581425
Gene position: 3300628-3301071 (Clockwise)
Preceding gene: 118581424
Following gene: 118581426
Centisome position: 82.35
GC content: 61.49
Gene sequence:
>444_bases ATGTTACTGGATGTCAATGAAATCATGAAGATCCTGCCGCACCGTTTCCCGTTTCTCATGGTGGACCGCGTCATCGAACT GGAGCCCGGCAAACGCTGCGTCGGACTCAAGAACGTGACCATCAACGAGCCGTTTTTCCAGGGACACTTTCCCGGCCACC CGGTCATGCCGGGCGTGCTGATCGTGGAGGCCATGGCCCAGGTTGCCGGCATCATGGCCTATATGGCGTCGGACGACCGC ACCAAGAAGAAGGTCAGCTACTTCATGTCCATCGACAGCGCCAAGTTCCGCAAGCCGGTCTTCCCCGGCGACCAGCTGCG CATCGAGGTGGAGACAACCATGAACCGGCGCGGCATCTGGGGCGTCAACGGCAAGGTCTACGTGGACGGCACGCTGGTCA CCGAGGCGGCCCTCAAGGCTACCTTCGCCGACGCGGCGGACTGA
Upstream 100 bases:
>100_bases CATGCCGGAAACGCCCGGAGCGGGGCAGTTCATACCGGAATAATCCGAAGGATGCCACGCAACCGGACGTACATTAACCA GATAAAAAGGGGGAATACCC
Downstream 100 bases:
>100_bases TCGCCGTCTGCCGGCACAATAATGGACCAGGGCGGGCGCCTGAGCGCGTCCCCGCCCTGGTCCGCGTACCGTTCCTCCCT CACCCTTAGGTTTCGACTCG
Product: (3R)-hydroxymyristoyl-ACP dehydratase
Products: NA
Alternate protein names: (3R)-hydroxymyristoyl ACP dehydrase [H]
Number of amino acids: Translated: 147; Mature: 147
Protein sequence:
>147_residues MLLDVNEIMKILPHRFPFLMVDRVIELEPGKRCVGLKNVTINEPFFQGHFPGHPVMPGVLIVEAMAQVAGIMAYMASDDR TKKKVSYFMSIDSAKFRKPVFPGDQLRIEVETTMNRRGIWGVNGKVYVDGTLVTEAALKATFADAAD
Sequences:
>Translated_147_residues MLLDVNEIMKILPHRFPFLMVDRVIELEPGKRCVGLKNVTINEPFFQGHFPGHPVMPGVLIVEAMAQVAGIMAYMASDDR TKKKVSYFMSIDSAKFRKPVFPGDQLRIEVETTMNRRGIWGVNGKVYVDGTLVTEAALKATFADAAD >Mature_147_residues MLLDVNEIMKILPHRFPFLMVDRVIELEPGKRCVGLKNVTINEPFFQGHFPGHPVMPGVLIVEAMAQVAGIMAYMASDDR TKKKVSYFMSIDSAKFRKPVFPGDQLRIEVETTMNRRGIWGVNGKVYVDGTLVTEAALKATFADAAD
Specific function: Involved in saturated fatty acids biosynthesis [H]
COG id: COG0764
COG function: function code I; 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the thioester dehydratase family. FabZ subfamily [H]
Homologues:
Organism=Escherichia coli, GI1786377, Length=136, Percent_Identity=50.7352941176471, Blast_Score=152, Evalue=6e-39,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013114 - InterPro: IPR010084 [H]
Pfam domain/function: PF07977 FabA [H]
EC number: 4.2.1.-
Molecular weight: Translated: 16416; Mature: 16416
Theoretical pI: Translated: 8.47; Mature: 8.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 6.1 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 6.1 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLDVNEIMKILPHRFPFLMVDRVIELEPGKRCVGLKNVTINEPFFQGHFPGHPVMPGVL CEECHHHHHHHHCCCCCHHHHHHEEECCCCCEEEEECCCEECCCCCCCCCCCCCCCCHHH IVEAMAQVAGIMAYMASDDRTKKKVSYFMSIDSAKFRKPVFPGDQLRIEVETTMNRRGIW HHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHCCCCCCCCEEEEEEEECCCCCCEE GVNGKVYVDGTLVTEAALKATFADAAD CCCCEEEECCEEHHHHHHHHHHCCCCC >Mature Secondary Structure MLLDVNEIMKILPHRFPFLMVDRVIELEPGKRCVGLKNVTINEPFFQGHFPGHPVMPGVL CEECHHHHHHHHCCCCCHHHHHHEEECCCCCEEEEECCCEECCCCCCCCCCCCCCCCHHH IVEAMAQVAGIMAYMASDDRTKKKVSYFMSIDSAKFRKPVFPGDQLRIEVETTMNRRGIW HHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHCCCCCCCCEEEEEEEECCCCCCEE GVNGKVYVDGTLVTEAALKATFADAAD CCCCEEEECCEEHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Carbon-Oxygen Lyases; Hydro-Lyases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA