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The map label for this gene is yddQ [H]

Identifier: 118581381

GI number: 118581381

Start: 3247878

End: 3248450

Strand: Reverse

Name: yddQ [H]

Synonym: Ppro_2976

Alternate gene names: 118581381

Gene position: 3248450-3247878 (Counterclockwise)

Preceding gene: 118581382

Following gene: 118581380

Centisome position: 81.05

GC content: 60.03

Gene sequence:

>573_bases
ATGAAGGACACGAAATACGCCCTGATCATCATCGACATGCAAAATGATTTCGTTCTGCCCGGCGCGCCGGCGTGCGTTGC
GGGTGCCTATGCCACGCTTCCCTGCGTACGGCGGCTGCTGGATTTCTTCCGGGCAAACTCCTGGCCCGTGTTTCATGTCG
TGCGGGAGTACCGGGCGGACGGGAGCGATATCGAATGTACCCGGCTTCACGGTTTTCTCAACGATAAACGCTATGCGGTC
CCCGGAACCGAGGGGTGCGAGATCGTGGCCGAGCTTGCGCCGGTGGAGGGGGAGTACCGGGTGGTCAAGAACAGGTTTAG
CGGTTTCATGAACACGGAGCTGGATTTCATGCTGCGTAGGATCGGCGCCACGCAGCTGGTGATCTGCGGCACCCAGTATC
CCAACTGCATCCGGACCACCATTTTCGACGCCATCGCCCACGGCTACCCGGTCATCAATGTGACCGACGCCACGTCGGCA
CAGACCCCCCAGATCGCGGAGGCCAATATCACGGATCTGAAGAACATCGGGGTGGAGTGCGTTACGCTGCGGGAGTTCCT
CCAATCGTTCTGA

Upstream 100 bases:

>100_bases
GTGTGGCGGAGTGAGCGCTTGTTGAAGATGCCGTAAATATAAGTGAACTATCCCCGGCGTAGAGTTTGACATTTGGACAT
TCGTTAACAGGGAGCCGAAC

Downstream 100 bases:

>100_bases
AAGCCTGAAAAACCGTCCTAACCACCTTGTTGACAGGCAAGCAACCAACCAACCAGGTTCGATGCTGCCACCAGCAAGAA
ACACGCATTATTGTCTTTGA

Product: isochorismatase hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 190; Mature: 190

Protein sequence:

>190_residues
MKDTKYALIIIDMQNDFVLPGAPACVAGAYATLPCVRRLLDFFRANSWPVFHVVREYRADGSDIECTRLHGFLNDKRYAV
PGTEGCEIVAELAPVEGEYRVVKNRFSGFMNTELDFMLRRIGATQLVICGTQYPNCIRTTIFDAIAHGYPVINVTDATSA
QTPQIAEANITDLKNIGVECVTLREFLQSF

Sequences:

>Translated_190_residues
MKDTKYALIIIDMQNDFVLPGAPACVAGAYATLPCVRRLLDFFRANSWPVFHVVREYRADGSDIECTRLHGFLNDKRYAV
PGTEGCEIVAELAPVEGEYRVVKNRFSGFMNTELDFMLRRIGATQLVICGTQYPNCIRTTIFDAIAHGYPVINVTDATSA
QTPQIAEANITDLKNIGVECVTLREFLQSF
>Mature_190_residues
MKDTKYALIIIDMQNDFVLPGAPACVAGAYATLPCVRRLLDFFRANSWPVFHVVREYRADGSDIECTRLHGFLNDKRYAV
PGTEGCEIVAELAPVEGEYRVVKNRFSGFMNTELDFMLRRIGATQLVICGTQYPNCIRTTIFDAIAHGYPVINVTDATSA
QTPQIAEANITDLKNIGVECVTLREFLQSF

Specific function: Unknown

COG id: COG1335

COG function: function code Q; Amidases related to nicotinamidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the isochorismatase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000868 [H]

Pfam domain/function: PF00857 Isochorismatase [H]

EC number: NA

Molecular weight: Translated: 21221; Mature: 21221

Theoretical pI: Translated: 5.27; Mature: 5.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDTKYALIIIDMQNDFVLPGAPACVAGAYATLPCVRRLLDFFRANSWPVFHVVREYRAD
CCCCEEEEEEEECCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCC
GSDIECTRLHGFLNDKRYAVPGTEGCEIVAELAPVEGEYRVVKNRFSGFMNTELDFMLRR
CCCCCHHEEHHHHCCCEEECCCCCHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHH
IGATQLVICGTQYPNCIRTTIFDAIAHGYPVINVTDATSAQTPQIAEANITDLKNIGVEC
CCCCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCHHHHHCCCHH
VTLREFLQSF
HHHHHHHHHC
>Mature Secondary Structure
MKDTKYALIIIDMQNDFVLPGAPACVAGAYATLPCVRRLLDFFRANSWPVFHVVREYRAD
CCCCEEEEEEEECCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCC
GSDIECTRLHGFLNDKRYAVPGTEGCEIVAELAPVEGEYRVVKNRFSGFMNTELDFMLRR
CCCCCHHEEHHHHCCCEEECCCCCHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHH
IGATQLVICGTQYPNCIRTTIFDAIAHGYPVINVTDATSAQTPQIAEANITDLKNIGVEC
CCCCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCHHHHHCCCHH
VTLREFLQSF
HHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]