| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
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The map label for this gene is 118581360
Identifier: 118581360
GI number: 118581360
Start: 3225752
End: 3226921
Strand: Reverse
Name: 118581360
Synonym: Ppro_2955
Alternate gene names: NA
Gene position: 3226921-3225752 (Counterclockwise)
Preceding gene: 118581361
Following gene: 118581359
Centisome position: 80.51
GC content: 62.91
Gene sequence:
>1170_bases ATGGGCGTCTATGCCAACACTGTCAGCATCACCCAGTTCACCATCAGCGGCGACATCCCCCAGAAGGACCAGTTTGACTG GTTCTCCGGGAAACTGGCCGGCCGCGCCTTCCAGTCCATCGAAAACTCCAGCGACGAACTCTCCGAGGGGTGGACCCAGG TGGACCATCCCGACGATTCCGGTTTCCAACTCCCGTCAGCCTTCTGGCGCGACAACTACCTGGTATTTTCTCTGCGCCGC GACCAGCGCAGGATACCGGCCGCCGTCCTCAAGTCCCACACTGCCCGCGAAGAGGGGGCCTTTCTGGCCCAGCACCCTAA CCTGCGGCGCACGCCCAAGGACAAGCGCACCGAGATCAAGGAGCAGGTGCAGTTGCGCCTCATGACCCGCTGTCTGCCGG TCCCCGCCACGGTGGACGTTGTCTGGGACCTGAAGCGCGGCGTGCTGACCCTGTTCAGCCTGGGAAGCAAGGTGGTCGAG CGCTTCGAGGACATCTTCCGCAAGAGCTTCGAGGGGCTGCACCCGCTGGCGATCCATCCCTTTGCCCGGGCCAGCATGCT GCTGGAGGGGGAGTTGCTGGAAAAGCTGGAGAAAGCCAACCAGGCCAATTCCGATTCTGCCGTTGCCCTGATCCGCGACA ACCAGTGGCTTGGCTGGGACTTTCTGCTCTGGCTCCTGCAGCGCGGCCTGAACGGCGAGGGGGATTTCAGGATCAGCCGT CCCGGACACTTCAGCACGGGCGAAGGGTTCACCGCCTGGATCGACGACCGCATCTTGCTCCAGGGTGGAGGCGAGGAGGG GGGCATCCAGAAGGTCTCCGTGTCAGGCTCCCAGGACAGCTACCTGGAGGCCATCTCCGCCATCAAGGGGGGCAAGAAGA TCACCAGCGCCACCATCTGCATGGAGAAGGACGAGAACCTCTGGAAGCTGACCCTGAAAGGGGAGACCTTCGGTTTCGCC TCCTTCAAATGCCCCCAGGTGCGCATCGAGCGGGACAGCACCGTGGAGGAGATGAGCGAACGGGAGGCGGCCTTCTTCGA GCGCATGTTCCTGCTGGAGCAGGGGATCCAGCTCTTTGACAGCCTGTTCGTAACCTTTCTGGAGGAGCGGCTGACGGACG CCTGGAACGGGCGCATCGTGGCCATCCAGGAGTGGTTGGAGGGTAAGTGA
Upstream 100 bases:
>100_bases CGATCACAGGGAAAAACAGGCGGGGCGGGTTTCAGACCCGCCCCGCGTTTTGATCATTCCCTGTTCCGCTCCACCCGATT AGCGAAAGGAACCAAGCTTC
Downstream 100 bases:
>100_bases CGTGAAATTCATCGACGAAGTAACCCTGTTCGCCTCTTCCGGCCATGGCGGCGCCGGCTGCGTGGCTTTCCGCCGCGAGA AGTTCATCGAGTTCGGCGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 389; Mature: 388
Protein sequence:
>389_residues MGVYANTVSITQFTISGDIPQKDQFDWFSGKLAGRAFQSIENSSDELSEGWTQVDHPDDSGFQLPSAFWRDNYLVFSLRR DQRRIPAAVLKSHTAREEGAFLAQHPNLRRTPKDKRTEIKEQVQLRLMTRCLPVPATVDVVWDLKRGVLTLFSLGSKVVE RFEDIFRKSFEGLHPLAIHPFARASMLLEGELLEKLEKANQANSDSAVALIRDNQWLGWDFLLWLLQRGLNGEGDFRISR PGHFSTGEGFTAWIDDRILLQGGGEEGGIQKVSVSGSQDSYLEAISAIKGGKKITSATICMEKDENLWKLTLKGETFGFA SFKCPQVRIERDSTVEEMSEREAAFFERMFLLEQGIQLFDSLFVTFLEERLTDAWNGRIVAIQEWLEGK
Sequences:
>Translated_389_residues MGVYANTVSITQFTISGDIPQKDQFDWFSGKLAGRAFQSIENSSDELSEGWTQVDHPDDSGFQLPSAFWRDNYLVFSLRR DQRRIPAAVLKSHTAREEGAFLAQHPNLRRTPKDKRTEIKEQVQLRLMTRCLPVPATVDVVWDLKRGVLTLFSLGSKVVE RFEDIFRKSFEGLHPLAIHPFARASMLLEGELLEKLEKANQANSDSAVALIRDNQWLGWDFLLWLLQRGLNGEGDFRISR PGHFSTGEGFTAWIDDRILLQGGGEEGGIQKVSVSGSQDSYLEAISAIKGGKKITSATICMEKDENLWKLTLKGETFGFA SFKCPQVRIERDSTVEEMSEREAAFFERMFLLEQGIQLFDSLFVTFLEERLTDAWNGRIVAIQEWLEGK >Mature_388_residues GVYANTVSITQFTISGDIPQKDQFDWFSGKLAGRAFQSIENSSDELSEGWTQVDHPDDSGFQLPSAFWRDNYLVFSLRRD QRRIPAAVLKSHTAREEGAFLAQHPNLRRTPKDKRTEIKEQVQLRLMTRCLPVPATVDVVWDLKRGVLTLFSLGSKVVER FEDIFRKSFEGLHPLAIHPFARASMLLEGELLEKLEKANQANSDSAVALIRDNQWLGWDFLLWLLQRGLNGEGDFRISRP GHFSTGEGFTAWIDDRILLQGGGEEGGIQKVSVSGSQDSYLEAISAIKGGKKITSATICMEKDENLWKLTLKGETFGFAS FKCPQVRIERDSTVEEMSEREAAFFERMFLLEQGIQLFDSLFVTFLEERLTDAWNGRIVAIQEWLEGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44149; Mature: 44018
Theoretical pI: Translated: 5.12; Mature: 5.12
Prosite motif: PS00678 WD_REPEATS_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGVYANTVSITQFTISGDIPQKDQFDWFSGKLAGRAFQSIENSSDELSEGWTQVDHPDDS CCEEECEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCC GFQLPSAFWRDNYLVFSLRRDQRRIPAAVLKSHTAREEGAFLAQHPNLRRTPKDKRTEIK CCCCCHHHHCCCEEEEEECCCCHHCCHHHHHHHCCHHCCCEEECCCCCCCCCCHHHHHHH EQVQLRLMTRCLPVPATVDVVWDLKRGVLTLFSLGSKVVERFEDIFRKSFEGLHPLAIHP HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECC FARASMLLEGELLEKLEKANQANSDSAVALIRDNQWLGWDFLLWLLQRGLNGEGDFRISR HHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCEEECC PGHFSTGEGFTAWIDDRILLQGGGEEGGIQKVSVSGSQDSYLEAISAIKGGKKITSATIC CCCCCCCCCEEEEECCEEEEECCCCCCCEEEEEECCCCHHHHHHHHHHCCCCEEEEEEEE MEKDENLWKLTLKGETFGFASFKCPQVRIERDSTVEEMSEREAAFFERMFLLEQGIQLFD EECCCCEEEEEECCCEEEECCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH SLFVTFLEERLTDAWNGRIVAIQEWLEGK HHHHHHHHHHHHHHHCCEEEEEEHHCCCC >Mature Secondary Structure GVYANTVSITQFTISGDIPQKDQFDWFSGKLAGRAFQSIENSSDELSEGWTQVDHPDDS CEEECEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCC GFQLPSAFWRDNYLVFSLRRDQRRIPAAVLKSHTAREEGAFLAQHPNLRRTPKDKRTEIK CCCCCHHHHCCCEEEEEECCCCHHCCHHHHHHHCCHHCCCEEECCCCCCCCCCHHHHHHH EQVQLRLMTRCLPVPATVDVVWDLKRGVLTLFSLGSKVVERFEDIFRKSFEGLHPLAIHP HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECC FARASMLLEGELLEKLEKANQANSDSAVALIRDNQWLGWDFLLWLLQRGLNGEGDFRISR HHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCEEECC PGHFSTGEGFTAWIDDRILLQGGGEEGGIQKVSVSGSQDSYLEAISAIKGGKKITSATIC CCCCCCCCCEEEEECCEEEEECCCCCCCEEEEEECCCCHHHHHHHHHHCCCCEEEEEEEE MEKDENLWKLTLKGETFGFASFKCPQVRIERDSTVEEMSEREAAFFERMFLLEQGIQLFD EECCCCEEEEEECCCEEEECCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH SLFVTFLEERLTDAWNGRIVAIQEWLEGK HHHHHHHHHHHHHHHCCEEEEEEHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA