Definition Pelobacter propionicus DSM 2379 chromosome, complete genome.
Accession NC_008609
Length 4,008,000

Click here to switch to the map view.

The map label for this gene is 118581352

Identifier: 118581352

GI number: 118581352

Start: 3218759

End: 3219181

Strand: Direct

Name: 118581352

Synonym: Ppro_2947

Alternate gene names: NA

Gene position: 3218759-3219181 (Clockwise)

Preceding gene: 118581351

Following gene: 118581353

Centisome position: 80.31

GC content: 60.76

Gene sequence:

>423_bases
ATGGTCGATGACGTACTGATCAACAAGGCCGCCAGCATCGAGCGCTGCGTAAAACGAGCCCGCGAGGAATACGAACGGAA
CACCGCATCCTTTGCGGAGGATTATACGCGCCAGGACGCGGCCATCCTGAATGTCCAGCGCGCCTGCGAGGCTGCGCTGG
ACATGGGCCAGCACCTGATCCGGCGAGACCGGCTGGGTGTTCCCCAGAGCGCCCGCGACGTATTTTCACTGCTCGCCCGG
GCCGGATACATCGAAGACAGCCTGGCAGACAGCCTGAAACGCATGGTCGGCTTCCGCAACATCGCCGTGCATGACTACCA
GGACCTGCAACTGCCCATCGTCATCGCCATCATCGAAAAGCACCTGGATGACTTCCTGCTCTACAGCAGGAGCATCCTGC
TGCGCGATGGCCAATCGTCATGA

Upstream 100 bases:

>100_bases
CGGGCCGGAATATATGAGGCAGCCATCCTGAGCGAGAAAACCGAGCTGGACAGATCCCGAGCCGAACTGTTGGGGGATAT
CCTGAGGGAAGGAACCATTC

Downstream 100 bases:

>100_bases
GGGGATCACGGCCACCACACGGAGGGGATGCCCGGATAAAGCAGAACAGATGGCTGTATTCCGTTGTCGCCCTGCTGACA
TGGATCACTGCATCTCTATG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 140; Mature: 140

Protein sequence:

>140_residues
MVDDVLINKAASIERCVKRAREEYERNTASFAEDYTRQDAAILNVQRACEAALDMGQHLIRRDRLGVPQSARDVFSLLAR
AGYIEDSLADSLKRMVGFRNIAVHDYQDLQLPIVIAIIEKHLDDFLLYSRSILLRDGQSS

Sequences:

>Translated_140_residues
MVDDVLINKAASIERCVKRAREEYERNTASFAEDYTRQDAAILNVQRACEAALDMGQHLIRRDRLGVPQSARDVFSLLAR
AGYIEDSLADSLKRMVGFRNIAVHDYQDLQLPIVIAIIEKHLDDFLLYSRSILLRDGQSS
>Mature_140_residues
MVDDVLINKAASIERCVKRAREEYERNTASFAEDYTRQDAAILNVQRACEAALDMGQHLIRRDRLGVPQSARDVFSLLAR
AGYIEDSLADSLKRMVGFRNIAVHDYQDLQLPIVIAIIEKHLDDFLLYSRSILLRDGQSS

Specific function: Unknown

COG id: COG2445

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15924; Mature: 15924

Theoretical pI: Translated: 5.70; Mature: 5.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVDDVLINKAASIERCVKRAREEYERNTASFAEDYTRQDAAILNVQRACEAALDMGQHLI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRDRLGVPQSARDVFSLLARAGYIEDSLADSLKRMVGFRNIAVHDYQDLQLPIVIAIIEK
HHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
HLDDFLLYSRSILLRDGQSS
HHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MVDDVLINKAASIERCVKRAREEYERNTASFAEDYTRQDAAILNVQRACEAALDMGQHLI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRDRLGVPQSARDVFSLLARAGYIEDSLADSLKRMVGFRNIAVHDYQDLQLPIVIAIIEK
HHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
HLDDFLLYSRSILLRDGQSS
HHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA