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The map label for this gene is yuxH [H]

Identifier: 118581342

GI number: 118581342

Start: 3210921

End: 3212156

Strand: Reverse

Name: yuxH [H]

Synonym: Ppro_2937

Alternate gene names: 118581342

Gene position: 3212156-3210921 (Counterclockwise)

Preceding gene: 118581345

Following gene: 118581341

Centisome position: 80.14

GC content: 59.95

Gene sequence:

>1236_bases
ATGGAGAACGGAAACTATCTGATCGGCAGGCAGCCGATCCTGGACAGGAATGAAGAGGTTGTCGCCTATGAACTCCTCTT
CCGCTCGGCTGCGTCCCTGGATACGGCATCGGTCTGGAGCGCCTCCTACGCCACGGCCAGGGTGATTGTCAATACCCTGT
CCGGATTCGGCCTCGAACAGATCCTGGGGGGACACCGGGGGTTCAGCAACATGGAGCTGGACCTGCTGATGAGCGACTCC
ATCGCTATCCTGCCGCGGGAGCGGGTCGTGCTGGAACTGCTGGAAACCCTGCAGGTCACCCCCGGGTTGGTGGAACGCTG
CCGCTTTTTGAAGCACGAGGGGTTTACCCTGGCGCTGGACGATCATGAGTTCGATCCGCTCTACAATGAGCTGTACGGCA
TTGTTGATATCGTCAAAGTTGACCTGTTCCAGTCGCCGGTTGAGCATCTGCAGGAGATGGTTGAGCGCTTCAGTTCCTAT
TCCGTCAAGCTGCTGGCTGAAAAGGTGGAAAGCCGTGACCAGTACCTGCGCTGCCGCGACATGGGATTCGAATACTTCCA
GGGGTACTACTTCGCCAAGCCGTCCCTGATGGAGAAGAAACCGTTCGGCGATGCGGGGGCGCACCTGCTGAAGTTGATGC
GCCTGCTCATGGACGATGCCGACATAAGCGACATCGAGCATGCTTTTCGCCAAAGCCCCGGCCTGACGTACAAGCTGTTG
CTGCTGGTCAACTCGGTATCGCTGGGGATGCGGGTCAGGGTCCAGAACGTGCGCCATGCCGTGTCAAGCCTGGGGAGGCA
GCAGATCAAGCGCTGGGTGCAGCTCTGCCTGTTCGCCTTGGGTGACAGCAGCGGGCTGGAGAACCCCCTGGTGGAGATGG
CCGCGGTGCGGGCCGTCTTCATGGAGCATCTGGCCGGGCAGGTGCCGCGGTTGCGCGATAACCCGGAAGCCGCCGATCAG
GCCTTCATGATCGGTATCCTCTCGCTTCTGGAAACTATCTATACCATTTCCATCGACGAGGTCATTGCCAGTCTGCATCT
TTCCGATGAGGTCAGGGATGCCCTGGCCGAGCGGAGCGGTATTCTTGGTGAGCTGTTGCGGCTGGCCGAGCTGGTGGAAG
AGGTGGAATCCGACTTTGGTGAGACATCCCGCTGCTTCGTCGAAATGGGGCTCACCCTGGAGGATGTGCTGGCTGCCCAG
GTGAGGGCCTTTGGCTGGCGCTCCGGGAATCTGTGA

Upstream 100 bases:

>100_bases
TGATTTTAAAAGCTGAAAATTGCTGGTACAATTTGCTCCCTTGTGTCGGATTCGGGCACATCCGCAAGCATCCACGAATA
ACAAGCCGGGTGAGATCTCC

Downstream 100 bases:

>100_bases
CCATGGCCGGCTTCGCCGTGAGCGAGGAGAAGAACCGCTGGCTGCAGCGGGAGATGGCCCGGCTGAACGTACGGGAGGAG
GATCTGGAGGAACAGTTCGT

Product: diguanylate phosphodiesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 411; Mature: 411

Protein sequence:

>411_residues
MENGNYLIGRQPILDRNEEVVAYELLFRSAASLDTASVWSASYATARVIVNTLSGFGLEQILGGHRGFSNMELDLLMSDS
IAILPRERVVLELLETLQVTPGLVERCRFLKHEGFTLALDDHEFDPLYNELYGIVDIVKVDLFQSPVEHLQEMVERFSSY
SVKLLAEKVESRDQYLRCRDMGFEYFQGYYFAKPSLMEKKPFGDAGAHLLKLMRLLMDDADISDIEHAFRQSPGLTYKLL
LLVNSVSLGMRVRVQNVRHAVSSLGRQQIKRWVQLCLFALGDSSGLENPLVEMAAVRAVFMEHLAGQVPRLRDNPEAADQ
AFMIGILSLLETIYTISIDEVIASLHLSDEVRDALAERSGILGELLRLAELVEEVESDFGETSRCFVEMGLTLEDVLAAQ
VRAFGWRSGNL

Sequences:

>Translated_411_residues
MENGNYLIGRQPILDRNEEVVAYELLFRSAASLDTASVWSASYATARVIVNTLSGFGLEQILGGHRGFSNMELDLLMSDS
IAILPRERVVLELLETLQVTPGLVERCRFLKHEGFTLALDDHEFDPLYNELYGIVDIVKVDLFQSPVEHLQEMVERFSSY
SVKLLAEKVESRDQYLRCRDMGFEYFQGYYFAKPSLMEKKPFGDAGAHLLKLMRLLMDDADISDIEHAFRQSPGLTYKLL
LLVNSVSLGMRVRVQNVRHAVSSLGRQQIKRWVQLCLFALGDSSGLENPLVEMAAVRAVFMEHLAGQVPRLRDNPEAADQ
AFMIGILSLLETIYTISIDEVIASLHLSDEVRDALAERSGILGELLRLAELVEEVESDFGETSRCFVEMGLTLEDVLAAQ
VRAFGWRSGNL
>Mature_411_residues
MENGNYLIGRQPILDRNEEVVAYELLFRSAASLDTASVWSASYATARVIVNTLSGFGLEQILGGHRGFSNMELDLLMSDS
IAILPRERVVLELLETLQVTPGLVERCRFLKHEGFTLALDDHEFDPLYNELYGIVDIVKVDLFQSPVEHLQEMVERFSSY
SVKLLAEKVESRDQYLRCRDMGFEYFQGYYFAKPSLMEKKPFGDAGAHLLKLMRLLMDDADISDIEHAFRQSPGLTYKLL
LLVNSVSLGMRVRVQNVRHAVSSLGRQQIKRWVQLCLFALGDSSGLENPLVEMAAVRAVFMEHLAGQVPRLRDNPEAADQ
AFMIGILSLLETIYTISIDEVIASLHLSDEVRDALAERSGILGELLRLAELVEEVESDFGETSRCFVEMGLTLEDVLAAQ
VRAFGWRSGNL

Specific function: Unknown

COG id: COG3434

COG function: function code T; Predicted signal transduction protein containing EAL and modified HD-GYP domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 EAL domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014408
- InterPro:   IPR001633
- InterPro:   IPR013976 [H]

Pfam domain/function: PF00563 EAL; PF08668 HDOD [H]

EC number: NA

Molecular weight: Translated: 46259; Mature: 46259

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: PS50883 EAL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENGNYLIGRQPILDRNEEVVAYELLFRSAASLDTASVWSASYATARVIVNTLSGFGLEQ
CCCCCEEECCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHH
ILGGHRGFSNMELDLLMSDSIAILPRERVVLELLETLQVTPGLVERCRFLKHEGFTLALD
HHCCCCCCCCCEEEEEECCCEEECCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEC
DHEFDPLYNELYGIVDIVKVDLFQSPVEHLQEMVERFSSYSVKLLAEKVESRDQYLRCRD
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MGFEYFQGYYFAKPSLMEKKPFGDAGAHLLKLMRLLMDDADISDIEHAFRQSPGLTYKLL
CCHHHHCCEEECCCCHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCEEHH
LLVNSVSLGMRVRVQNVRHAVSSLGRQQIKRWVQLCLFALGDSSGLENPLVEMAAVRAVF
HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
MEHLAGQVPRLRDNPEAADQAFMIGILSLLETIYTISIDEVIASLHLSDEVRDALAERSG
HHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
ILGELLRLAELVEEVESDFGETSRCFVEMGLTLEDVLAAQVRAFGWRSGNL
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MENGNYLIGRQPILDRNEEVVAYELLFRSAASLDTASVWSASYATARVIVNTLSGFGLEQ
CCCCCEEECCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHH
ILGGHRGFSNMELDLLMSDSIAILPRERVVLELLETLQVTPGLVERCRFLKHEGFTLALD
HHCCCCCCCCCEEEEEECCCEEECCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEC
DHEFDPLYNELYGIVDIVKVDLFQSPVEHLQEMVERFSSYSVKLLAEKVESRDQYLRCRD
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MGFEYFQGYYFAKPSLMEKKPFGDAGAHLLKLMRLLMDDADISDIEHAFRQSPGLTYKLL
CCHHHHCCEEECCCCHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCEEHH
LLVNSVSLGMRVRVQNVRHAVSSLGRQQIKRWVQLCLFALGDSSGLENPLVEMAAVRAVF
HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
MEHLAGQVPRLRDNPEAADQAFMIGILSLLETIYTISIDEVIASLHLSDEVRDALAERSG
HHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
ILGELLRLAELVEEVESDFGETSRCFVEMGLTLEDVLAAQVRAFGWRSGNL
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2507523; 9274030; 9384377; 1943994 [H]