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The map label for this gene is yisS [H]

Identifier: 118581281

GI number: 118581281

Start: 3146896

End: 3147909

Strand: Reverse

Name: yisS [H]

Synonym: Ppro_2876

Alternate gene names: 118581281

Gene position: 3147909-3146896 (Counterclockwise)

Preceding gene: 118581282

Following gene: 118581280

Centisome position: 78.54

GC content: 50.89

Gene sequence:

>1014_bases
ATGCTGAATCTAGGCGTAATCGGATACGGCTACTGGGGCCCCAAAATCGTCAGAAACTTCAGTTGCGCGCAGGGGGCATC
GGTTGTGTCGGTCTGCGACCTGGACCAGAATGCACTGTCACAGGTAAAAAAAAGCTTCGAAAACGTACATGTCACGCAGG
ACATGAATGAAATCATCACGTCACCAAAGATTGACGCGGTGGCCATCGTCACTCCCGTTTCGACTCATTTCAACATCGCG
AAAATGGCGCTGCAAAACGGTAAACATGTTTTCATGGAAAAGCCGTTCACGGCCAGCACCGCAGAGGCGATGGAACTGAT
CGAACTGGCCGAAAAGAAAAAACTCGTCATCATGGTGGACCACACCTTCCTTTTTTGCGGAGCGGTTAAAAAGATCAAAC
AGCTCATCGATGAGGACATACTTGGAGAGCTGTACTACTTTGACTCCATCAGAATCAACCTCGGCCTGTTCCAGAAAGAT
GTCAACGTGGTCTGGGACCTGGCGCCCCTTGACTTTTCAATCATGCACCACCTTATCGGCCAGGAACCGGTCGCCGTTGC
CGCAACCGGCATGTCACATTTTGACAACTGCATCGAAAACGTCGCTTACATCACCGTTTATTTCCCTGGTAACCTCATCG
GCCATATCAACATCAACTGGCTGTCACCGGTCAAGATACGCACAACCTTGATCGGAGGCCACAAGAAGATGCTTGTCTGG
AATGACCTCGTGGCGGACGAGAAAATCAGGGTCTACGACCGGGGAGTGGTGAACGGAAACGGACTGAGCAAGGAGAAAAT
GAACAATTTCTTGATGCACTATCGAATGGGCGATATGTGGGCACCGCGATTCGAGCAGGTGGAGGCGCTCAAGAACGAAG
CCGAGTATTTTGTTGAATGCATTGACGGCAACAAGACACCGATCAACGACGGGATTGCCGGCATGAGGGTTGTCAAGATG
CTTGAGGCATCAGTCAGGTCGCTGAAAAATGGGGGAGTCGTCACCTACCTGTAA

Upstream 100 bases:

>100_bases
TCAAAATCCTTCTTGCAACCCCCAGGGCGGTGTTGCGAGGCAAGGGCGCATATTGAGAGATACCGGATAGGGGTACAATA
CCGAAAAGAGGTGAGAATCC

Downstream 100 bases:

>100_bases
CACACGTGGCCGCATTCGAGAGAGGAATACTACTATGGGCGAGTATGTATGCATATCTGACGATGTAAGGCTGGGTAAAA
ACGTCTCACTGTCCAAATTC

Product: oxidoreductase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 337; Mature: 337

Protein sequence:

>337_residues
MLNLGVIGYGYWGPKIVRNFSCAQGASVVSVCDLDQNALSQVKKSFENVHVTQDMNEIITSPKIDAVAIVTPVSTHFNIA
KMALQNGKHVFMEKPFTASTAEAMELIELAEKKKLVIMVDHTFLFCGAVKKIKQLIDEDILGELYYFDSIRINLGLFQKD
VNVVWDLAPLDFSIMHHLIGQEPVAVAATGMSHFDNCIENVAYITVYFPGNLIGHININWLSPVKIRTTLIGGHKKMLVW
NDLVADEKIRVYDRGVVNGNGLSKEKMNNFLMHYRMGDMWAPRFEQVEALKNEAEYFVECIDGNKTPINDGIAGMRVVKM
LEASVRSLKNGGVVTYL

Sequences:

>Translated_337_residues
MLNLGVIGYGYWGPKIVRNFSCAQGASVVSVCDLDQNALSQVKKSFENVHVTQDMNEIITSPKIDAVAIVTPVSTHFNIA
KMALQNGKHVFMEKPFTASTAEAMELIELAEKKKLVIMVDHTFLFCGAVKKIKQLIDEDILGELYYFDSIRINLGLFQKD
VNVVWDLAPLDFSIMHHLIGQEPVAVAATGMSHFDNCIENVAYITVYFPGNLIGHININWLSPVKIRTTLIGGHKKMLVW
NDLVADEKIRVYDRGVVNGNGLSKEKMNNFLMHYRMGDMWAPRFEQVEALKNEAEYFVECIDGNKTPINDGIAGMRVVKM
LEASVRSLKNGGVVTYL
>Mature_337_residues
MLNLGVIGYGYWGPKIVRNFSCAQGASVVSVCDLDQNALSQVKKSFENVHVTQDMNEIITSPKIDAVAIVTPVSTHFNIA
KMALQNGKHVFMEKPFTASTAEAMELIELAEKKKLVIMVDHTFLFCGAVKKIKQLIDEDILGELYYFDSIRINLGLFQKD
VNVVWDLAPLDFSIMHHLIGQEPVAVAATGMSHFDNCIENVAYITVYFPGNLIGHININWLSPVKIRTTLIGGHKKMLVW
NDLVADEKIRVYDRGVVNGNGLSKEKMNNFLMHYRMGDMWAPRFEQVEALKNEAEYFVECIDGNKTPINDGIAGMRVVKM
LEASVRSLKNGGVVTYL

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Escherichia coli, GI87081947, Length=169, Percent_Identity=33.7278106508876, Blast_Score=86, Evalue=3e-18,
Organism=Escherichia coli, GI87082405, Length=226, Percent_Identity=23.4513274336283, Blast_Score=72, Evalue=4e-14,
Organism=Escherichia coli, GI1789848, Length=110, Percent_Identity=34.5454545454545, Blast_Score=72, Evalue=6e-14,
Organism=Escherichia coli, GI1787574, Length=145, Percent_Identity=26.2068965517241, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 37717; Mature: 37717

Theoretical pI: Translated: 6.67; Mature: 6.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNLGVIGYGYWGPKIVRNFSCAQGASVVSVCDLDQNALSQVKKSFENVHVTQDMNEIIT
CCEEEEEEECCCCHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHEEECCCHHHHHC
SPKIDAVAIVTPVSTHFNIAKMALQNGKHVFMEKPFTASTAEAMELIELAEKKKLVIMVD
CCCCCEEEEEECCCCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEC
HTFLFCGAVKKIKQLIDEDILGELYYFDSIRINLGLFQKDVNVVWDLAPLDFSIMHHLIG
CHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEEEECCCEEEEEECCCCHHHHHHHHC
QEPVAVAATGMSHFDNCIENVAYITVYFPGNLIGHININWLSPVKIRTTLIGGHKKMLVW
CCCCEEEECCHHHHHHHHCCEEEEEEEECCCEEEEEEEEEECCEEEEEEEECCCEEEEEE
NDLVADEKIRVYDRGVVNGNGLSKEKMNNFLMHYRMGDMWAPRFEQVEALKNEAEYFVEC
ECCCCCCEEEEEECCEECCCCCCHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHE
IDGNKTPINDGIAGMRVVKMLEASVRSLKNGGVVTYL
ECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEC
>Mature Secondary Structure
MLNLGVIGYGYWGPKIVRNFSCAQGASVVSVCDLDQNALSQVKKSFENVHVTQDMNEIIT
CCEEEEEEECCCCHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHEEECCCHHHHHC
SPKIDAVAIVTPVSTHFNIAKMALQNGKHVFMEKPFTASTAEAMELIELAEKKKLVIMVD
CCCCCEEEEEECCCCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEC
HTFLFCGAVKKIKQLIDEDILGELYYFDSIRINLGLFQKDVNVVWDLAPLDFSIMHHLIG
CHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEEEECCCEEEEEECCCCHHHHHHHHC
QEPVAVAATGMSHFDNCIENVAYITVYFPGNLIGHININWLSPVKIRTTLIGGHKKMLVW
CCCCEEEECCHHHHHHHHCCEEEEEEEECCCEEEEEEEEEECCEEEEEEEECCCEEEEEE
NDLVADEKIRVYDRGVVNGNGLSKEKMNNFLMHYRMGDMWAPRFEQVEALKNEAEYFVEC
ECCCCCCEEEEEECCEECCCCCCHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHE
IDGNKTPINDGIAGMRVVKMLEASVRSLKNGGVVTYL
ECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353932; 9384377; 8407808 [H]