| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
Click here to switch to the map view.
The map label for this gene is dapH [H]
Identifier: 118581274
GI number: 118581274
Start: 3138944
End: 3139462
Strand: Reverse
Name: dapH [H]
Synonym: Ppro_2869
Alternate gene names: 118581274
Gene position: 3139462-3138944 (Counterclockwise)
Preceding gene: 118581275
Following gene: 118581273
Centisome position: 78.33
GC content: 47.78
Gene sequence:
>519_bases ATGATGGCACTTCAGAAGCGATTGCTCGGCAAGCTTGCCATGATTGCTCCAGGCGGGTATTCGCTGCGTCCCTGGCTGCA CAGAAAGCGGGGTGTTCAGATCGGTTCCAACGTCTGGATAAGCCAGTATGTGTATATAGATGAGCTCCATCCCGAAAATG TAATTATTAAGGATAATGTCATAATAGGCCTCAGGTGTACCATATTTTCTCATTTTTATCTGGGAGGATACAGGTCTGCG GAAAAATCAGGAAAAGTGGTTATAGAGAAGAATGTGTACATCGGTCCCGGCTGTATCATTTTAAATGACGTGACGATCGG GGAAGGAGCAGTGGTAACTGCCGGAAGCGTCGTAACCAAAAATGTGCCTCCCGGAATCCTGTATGGGCACTCGCCCTGTG CTCCTTTGGCACAGATAACACATCCACTGATACATGACGGCAATGTGGATTACCGGCATTTTCTGTTTGGTCTGAGAAAG TACAACGATGAATCCGGGCCGCATAGGCCGAAATTGTGA
Upstream 100 bases:
>100_bases GGCTGTCGAGAGCTGCTCAATTCCCCTTGATACCACCGGATACGTCACCTGTTTCGGGGAAATGAACGCATGTGAGGCTG TATTTTAATGGAGAATTAAA
Downstream 100 bases:
>100_bases TTGATGCGGGTTTAAAAGCCATTGTTAGTGCAGTTCCCCAAACACGGAACGGAGAGGAGGACCGATGAATGGAACGGTGC ACCATTTGCGTGAGGCATTG
Product: acetyltransferase
Products: NA
Alternate protein names: Tetrahydrodipicolinate N-acetyltransferase; THP acetyltransferase; Tetrahydropicolinate acetylase [H]
Number of amino acids: Translated: 172; Mature: 172
Protein sequence:
>172_residues MMALQKRLLGKLAMIAPGGYSLRPWLHRKRGVQIGSNVWISQYVYIDELHPENVIIKDNVIIGLRCTIFSHFYLGGYRSA EKSGKVVIEKNVYIGPGCIILNDVTIGEGAVVTAGSVVTKNVPPGILYGHSPCAPLAQITHPLIHDGNVDYRHFLFGLRK YNDESGPHRPKL
Sequences:
>Translated_172_residues MMALQKRLLGKLAMIAPGGYSLRPWLHRKRGVQIGSNVWISQYVYIDELHPENVIIKDNVIIGLRCTIFSHFYLGGYRSA EKSGKVVIEKNVYIGPGCIILNDVTIGEGAVVTAGSVVTKNVPPGILYGHSPCAPLAQITHPLIHDGNVDYRHFLFGLRK YNDESGPHRPKL >Mature_172_residues MMALQKRLLGKLAMIAPGGYSLRPWLHRKRGVQIGSNVWISQYVYIDELHPENVIIKDNVIIGLRCTIFSHFYLGGYRSA EKSGKVVIEKNVYIGPGCIILNDVTIGEGAVVTAGSVVTKNVPPGILYGHSPCAPLAQITHPLIHDGNVDYRHFLFGLRK YNDESGPHRPKL
Specific function: Catalyzes the transfer of an acetyl group from acetyl- CoA to tetrahydrodipicolinate [H]
COG id: COG0110
COG function: function code R; Acetyltransferase (isoleucine patch superfamily)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transferase hexapeptide repeat family. DapH subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013710 - InterPro: IPR018357 - InterPro: IPR019873 - InterPro: IPR011004 [H]
Pfam domain/function: PF08503 DapD_N [H]
EC number: =2.3.1.89 [H]
Molecular weight: Translated: 19058; Mature: 19058
Theoretical pI: Translated: 9.69; Mature: 9.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMALQKRLLGKLAMIAPGGYSLRPWLHRKRGVQIGSNVWISQYVYIDELHPENVIIKDNV CCHHHHHHHHHEEEECCCCCCCCHHHHHHCCCEECCCEEEEEEEEEECCCCCCEEEECCE IIGLRCTIFSHFYLGGYRSAEKSGKVVIEKNVYIGPGCIILNDVTIGEGAVVTAGSVVTK EEEEEHHHHHHHHHCCCCCCCCCCCEEEECCEEECCCEEEEEEEEECCCCEEECCCEEEC NVPPGILYGHSPCAPLAQITHPLIHDGNVDYRHFLFGLRKYNDESGPHRPKL CCCCCEEECCCCCCCHHHHCCCCEECCCCCHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MMALQKRLLGKLAMIAPGGYSLRPWLHRKRGVQIGSNVWISQYVYIDELHPENVIIKDNV CCHHHHHHHHHEEEECCCCCCCCHHHHHHCCCEECCCEEEEEEEEEECCCCCCEEEECCE IIGLRCTIFSHFYLGGYRSAEKSGKVVIEKNVYIGPGCIILNDVTIGEGAVVTAGSVVTK EEEEEHHHHHHHHHCCCCCCCCCCCEEEECCEEECCCEEEEEEEEECCCCEEECCCEEEC NVPPGILYGHSPCAPLAQITHPLIHDGNVDYRHFLFGLRKYNDESGPHRPKL CCCCCEEECCCCCCCHHHHCCCCEECCCCCHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA