| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
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The map label for this gene is cobP [H]
Identifier: 118581212
GI number: 118581212
Start: 3070265
End: 3070798
Strand: Direct
Name: cobP [H]
Synonym: Ppro_2805
Alternate gene names: 118581212
Gene position: 3070265-3070798 (Clockwise)
Preceding gene: 118581211
Following gene: 118581213
Centisome position: 76.6
GC content: 65.17
Gene sequence:
>534_bases ATGGCACGCACACTATTCATTACCGGCGGGGCACGCAGCGGCAAGAGCGCCTTCGCCGAACAGCTAGCCATGGGCTTCGG CGCACCGTTGGGCTACCTGGCCACGGCCCGCTCCCTGGACGGCGAAATGGACGCCCGCATCGGGAAGCACCAAGAACGGC GCGGCACTGCCTGGCACACGATCGAGGAACCGCTGCACCTGGCGCAGACCCTGAGAGACCAGGACGGAGCGTTCAAGGCC ATCCTGGTCGACTGCCTGACCCTCTGGCTCACCAACCTGCTCCTTCTGGACGAAGAACCGGCCGACGACAGCGAAGAGCG TGTCATGGCAGATGTGCGCCAACTGGAAACCACCCTGGCCACCATGGCAACGCCGGTGATCATCGTCTCCAACGAGGTCG GCATGGGTATCGTACCCGAGCATCGCTTGGGACGCATCTTTCGCGACCTTGCCGGCCGGGCCAACCAGGCTCTGGCGGCA ACGGCGGACGAGGCCTGGCTGGTGGCCAGCGGCATACCGCTGCGCCTTAAATAG
Upstream 100 bases:
>100_bases GAGCCGAAGCCGGATAGTATCCACATCGTATCCACGCGTTTCGAGCCCCTGCCCATCTTCCGGCGTCAGGGGCTTTTCTT TTATTGAGGAGGAGTCGGTC
Downstream 100 bases:
>100_bases GATAAGAACTCTTTCACAGATATGGAGCACCCCATGAACAGGACTATCGTTGAAACCACTCGTGAGCGCATCAAACCGGT CAACCGGGAACTGATGCAAC
Product: adenosylcobinamide kinase
Products: NA
Alternate protein names: Adenosylcobinamide kinase; Adenosylcobinamide-phosphate guanylyltransferase [H]
Number of amino acids: Translated: 177; Mature: 176
Protein sequence:
>177_residues MARTLFITGGARSGKSAFAEQLAMGFGAPLGYLATARSLDGEMDARIGKHQERRGTAWHTIEEPLHLAQTLRDQDGAFKA ILVDCLTLWLTNLLLLDEEPADDSEERVMADVRQLETTLATMATPVIIVSNEVGMGIVPEHRLGRIFRDLAGRANQALAA TADEAWLVASGIPLRLK
Sequences:
>Translated_177_residues MARTLFITGGARSGKSAFAEQLAMGFGAPLGYLATARSLDGEMDARIGKHQERRGTAWHTIEEPLHLAQTLRDQDGAFKA ILVDCLTLWLTNLLLLDEEPADDSEERVMADVRQLETTLATMATPVIIVSNEVGMGIVPEHRLGRIFRDLAGRANQALAA TADEAWLVASGIPLRLK >Mature_176_residues ARTLFITGGARSGKSAFAEQLAMGFGAPLGYLATARSLDGEMDARIGKHQERRGTAWHTIEEPLHLAQTLRDQDGAFKAI LVDCLTLWLTNLLLLDEEPADDSEERVMADVRQLETTLATMATPVIIVSNEVGMGIVPEHRLGRIFRDLAGRANQALAAT ADEAWLVASGIPLRLK
Specific function: Catalyzes ATP-dependent phosphorylation of adenosylcobinamide and addition of GMP to adenosylcobinamide phosphate [H]
COG id: COG2087
COG function: function code H; Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788302, Length=180, Percent_Identity=42.7777777777778, Blast_Score=137, Evalue=3e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003203 [H]
Pfam domain/function: PF02283 CobU [H]
EC number: =2.7.1.156; =2.7.7.62 [H]
Molecular weight: Translated: 19249; Mature: 19118
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARTLFITGGARSGKSAFAEQLAMGFGAPLGYLATARSLDGEMDARIGKHQERRGTAWHT CCEEEEEECCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHCCHHHHCCCHHHH IEEPLHLAQTLRDQDGAFKAILVDCLTLWLTNLLLLDEEPADDSEERVMADVRQLETTLA HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH TMATPVIIVSNEVGMGIVPEHRLGRIFRDLAGRANQALAATADEAWLVASGIPLRLK HHHCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCHHEECCCCCEEEECCCCEEEC >Mature Secondary Structure ARTLFITGGARSGKSAFAEQLAMGFGAPLGYLATARSLDGEMDARIGKHQERRGTAWHT CEEEEEECCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHCCHHHHCCCHHHH IEEPLHLAQTLRDQDGAFKAILVDCLTLWLTNLLLLDEEPADDSEERVMADVRQLETTLA HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH TMATPVIIVSNEVGMGIVPEHRLGRIFRDLAGRANQALAATADEAWLVASGIPLRLK HHHCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCHHEECCCCCEEEECCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1655697; 1655696 [H]