| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
Click here to switch to the map view.
The map label for this gene is ybbP [H]
Identifier: 118581052
GI number: 118581052
Start: 2868214
End: 2869629
Strand: Reverse
Name: ybbP [H]
Synonym: Ppro_2640
Alternate gene names: 118581052
Gene position: 2869629-2868214 (Counterclockwise)
Preceding gene: 118581054
Following gene: 118581051
Centisome position: 71.6
GC content: 61.16
Gene sequence:
>1416_bases GTGGCGCCACCATTCATCCGCATTCAGGATATTGCCGACATCCTGATCATGACCTTCCTCCTGTACCAGCTCTACTCCTG GTTCTATCGCACCCGTGCCATGCAGGTCCTGCTGGGGCTGGGCGTGGTGACCCTGATCTACTTCGCCACCCGCTTTCTCG GGCTGTATATGACCAGCTGGATACTCCAGGAGCTGGGCACGGTCCTGATCATCCTGCTGATCGTGGTGTTCCAGGCGGAG ATCCGCCAGGCGCTCTACCGCTTCAGTCTGTTGCGCCACCTGTTCGAGCGGCGCAATGAAGTGCGTCCCAGTCCCTTTCA GGATATTGTTGAAACCCTCTTCTGTCTGGCTGCCAAGCGCACCGGAGCGCTTCTGGTCTTCGAGCGCAACGACCCGTTGG GTGATCTGATGCTGAACGGTGTCAAGATGGACTGTCGCATCAGTTCCCAGATCCTGGAGACCGTCTTCACCGACGGCACT CCGCTCCACGACGGCGCGGCCCTGGTCCGCGGCGAGCGCATTGCCGTGGCTTCCTGCCACCTGCCGCTGTCGGTCAATCC GGAAATCCCCCAGTACCTGGGGACGCGCCATCGCGCGGCCCTGGGGCTCTCCGAGCGCACCGACGCCGTGGTGGCCGTGG TTTCCGAGGAGCGCGGTACGGTGTCGCTGGCAGTGGGCACCGAACTGCGCCCCTACGACACTCCGGGAGAACTGATCGCG GCCCTGGAAGGGCTGTTCGCTCCGCATCTTGAAAAGCCGCATATCACCCACGGCCTGCACCTGTTCAGCAATCTGATGCC GAAAACGGCAATCCTGCTGATTGTGGCTACGCTTTGGGCACTGATCAGTTCGCGACAGGGACAGATCATCACGGTAAGCG CTCCGGTCAGGCTGCACGGCATACCGGATCGCCTGGCCTTGGTGCGCAGCGCTCCCGAAGAGGTGGATGTACAGCTCAAG TCGTTTTCCATCCTGACGCCGCTCCCCTCCAAGCTGGATATTTCCGCCGACATAGACCTCTCCTCCGTCCGCCAGGGACA GGCCAATGTCAGGGTCAAGAACACCGATTTCAGGCTCCCCTCGGGAATGGAGGTAACGTCTGTCACGCCCTCATCCATCA GGGTGGTGACCGATCGCAAGGAGCGCAGAAGGGTGCCGGTGCGGGTGGCATTACGCAGAAACACGGGGCACGGATTGCGG GGAATGAAAATCGTGGCTGACCCGGACTGGGTCGAGGTTGAGGGGCCGGCGGCCCAGGTTCAACGCATCGATGCGGTTGT TACCGAGGAAGTGGATGCCGGCCGTCTGATCAGGGGGCAGGACTATCGCCGGAGCCTGCTGCCGCCGGATAACAATATAT CCGTTCTGCGGGACGAACCGGTTGTCGTGCGACTGATTTCTCGTGAAAAAAAATAA
Upstream 100 bases:
>100_bases CAGAGAACACCAGCAAAAACGGCTTCTGCCCGCGTGAAGCCCCGCGATCCGCTGACCTGCCTCAGGGGCGCAAGTTACGC ATTGAAAGGGAGTCTGACCC
Downstream 100 bases:
>100_bases TAATTCGGATTGCTTGGCCTGCTTGATGCATGGCAAAACAGGGCTGGAAGGACATTGCAATTGACTTTGCATACTTTTTG TTATATAGAGTATAGCCATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 471; Mature: 470
Protein sequence:
>471_residues MAPPFIRIQDIADILIMTFLLYQLYSWFYRTRAMQVLLGLGVVTLIYFATRFLGLYMTSWILQELGTVLIILLIVVFQAE IRQALYRFSLLRHLFERRNEVRPSPFQDIVETLFCLAAKRTGALLVFERNDPLGDLMLNGVKMDCRISSQILETVFTDGT PLHDGAALVRGERIAVASCHLPLSVNPEIPQYLGTRHRAALGLSERTDAVVAVVSEERGTVSLAVGTELRPYDTPGELIA ALEGLFAPHLEKPHITHGLHLFSNLMPKTAILLIVATLWALISSRQGQIITVSAPVRLHGIPDRLALVRSAPEEVDVQLK SFSILTPLPSKLDISADIDLSSVRQGQANVRVKNTDFRLPSGMEVTSVTPSSIRVVTDRKERRRVPVRVALRRNTGHGLR GMKIVADPDWVEVEGPAAQVQRIDAVVTEEVDAGRLIRGQDYRRSLLPPDNNISVLRDEPVVVRLISREKK
Sequences:
>Translated_471_residues MAPPFIRIQDIADILIMTFLLYQLYSWFYRTRAMQVLLGLGVVTLIYFATRFLGLYMTSWILQELGTVLIILLIVVFQAE IRQALYRFSLLRHLFERRNEVRPSPFQDIVETLFCLAAKRTGALLVFERNDPLGDLMLNGVKMDCRISSQILETVFTDGT PLHDGAALVRGERIAVASCHLPLSVNPEIPQYLGTRHRAALGLSERTDAVVAVVSEERGTVSLAVGTELRPYDTPGELIA ALEGLFAPHLEKPHITHGLHLFSNLMPKTAILLIVATLWALISSRQGQIITVSAPVRLHGIPDRLALVRSAPEEVDVQLK SFSILTPLPSKLDISADIDLSSVRQGQANVRVKNTDFRLPSGMEVTSVTPSSIRVVTDRKERRRVPVRVALRRNTGHGLR GMKIVADPDWVEVEGPAAQVQRIDAVVTEEVDAGRLIRGQDYRRSLLPPDNNISVLRDEPVVVRLISREKK >Mature_470_residues APPFIRIQDIADILIMTFLLYQLYSWFYRTRAMQVLLGLGVVTLIYFATRFLGLYMTSWILQELGTVLIILLIVVFQAEI RQALYRFSLLRHLFERRNEVRPSPFQDIVETLFCLAAKRTGALLVFERNDPLGDLMLNGVKMDCRISSQILETVFTDGTP LHDGAALVRGERIAVASCHLPLSVNPEIPQYLGTRHRAALGLSERTDAVVAVVSEERGTVSLAVGTELRPYDTPGELIAA LEGLFAPHLEKPHITHGLHLFSNLMPKTAILLIVATLWALISSRQGQIITVSAPVRLHGIPDRLALVRSAPEEVDVQLKS FSILTPLPSKLDISADIDLSSVRQGQANVRVKNTDFRLPSGMEVTSVTPSSIRVVTDRKERRRVPVRVALRRNTGHGLRG MKIVADPDWVEVEGPAAQVQRIDAVVTEEVDAGRLIRGQDYRRSLLPPDNNISVLRDEPVVVRLISREKK
Specific function: Unknown
COG id: COG1624
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014046 - InterPro: IPR003390 [H]
Pfam domain/function: PF02457 DisA_N [H]
EC number: NA
Molecular weight: Translated: 52597; Mature: 52466
Theoretical pI: Translated: 9.30; Mature: 9.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPPFIRIQDIADILIMTFLLYQLYSWFYRTRAMQVLLGLGVVTLIYFATRFLGLYMTSW CCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ILQELGTVLIILLIVVFQAEIRQALYRFSLLRHLFERRNEVRPSPFQDIVETLFCLAAKR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCC TGALLVFERNDPLGDLMLNGVKMDCRISSQILETVFTDGTPLHDGAALVRGERIAVASCH CCEEEEEECCCCHHHHHHCCEEEEHHHHHHHHHHHHCCCCCCCCCHHHHCCCEEEEEEEC LPLSVNPEIPQYLGTRHRAALGLSERTDAVVAVVSEERGTVSLAVGTELRPYDTPGELIA CCCCCCCCCHHHHCCHHHHHCCCCCCCCEEEEEEECCCCEEEEEECCCCCCCCCHHHHHH ALEGLFAPHLEKPHITHGLHLFSNLMPKTAILLIVATLWALISSRQGQIITVSAPVRLHG HHHHHHCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCEEEEECCEEECC IPDRLALVRSAPEEVDVQLKSFSILTPLPSKLDISADIDLSSVRQGQANVRVKNTDFRLP CCHHHHHHHCCCHHHCEEEEEEEEECCCCCCCCCCCCCCHHHHCCCCCCEEEECCCCCCC SGMEVTSVTPSSIRVVTDRKERRRVPVRVALRRNTGHGLRGMKIVADPDWVEVEGPAAQV CCCEEEEECCCCEEEEECCHHHCCCCEEEEEECCCCCCCCCEEEEECCCEEEECCCHHHH QRIDAVVTEEVDAGRLIRGQDYRRSLLPPDNNISVLRDEPVVVRLISREKK HHHHHHHHCCCCCCCEECCCCHHHCCCCCCCCEEEEECCCCEEEEECCCCC >Mature Secondary Structure APPFIRIQDIADILIMTFLLYQLYSWFYRTRAMQVLLGLGVVTLIYFATRFLGLYMTSW CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ILQELGTVLIILLIVVFQAEIRQALYRFSLLRHLFERRNEVRPSPFQDIVETLFCLAAKR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCC TGALLVFERNDPLGDLMLNGVKMDCRISSQILETVFTDGTPLHDGAALVRGERIAVASCH CCEEEEEECCCCHHHHHHCCEEEEHHHHHHHHHHHHCCCCCCCCCHHHHCCCEEEEEEEC LPLSVNPEIPQYLGTRHRAALGLSERTDAVVAVVSEERGTVSLAVGTELRPYDTPGELIA CCCCCCCCCHHHHCCHHHHHCCCCCCCCEEEEEEECCCCEEEEEECCCCCCCCCHHHHHH ALEGLFAPHLEKPHITHGLHLFSNLMPKTAILLIVATLWALISSRQGQIITVSAPVRLHG HHHHHHCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCEEEEECCEEECC IPDRLALVRSAPEEVDVQLKSFSILTPLPSKLDISADIDLSSVRQGQANVRVKNTDFRLP CCHHHHHHHCCCHHHCEEEEEEEEECCCCCCCCCCCCCCHHHHCCCCCCEEEECCCCCCC SGMEVTSVTPSSIRVVTDRKERRRVPVRVALRRNTGHGLRGMKIVADPDWVEVEGPAAQV CCCEEEEECCCCEEEEECCHHHCCCCEEEEEECCCCCCCCCEEEEECCCEEEECCCHHHH QRIDAVVTEEVDAGRLIRGQDYRRSLLPPDNNISVLRDEPVVVRLISREKK HHHHHHHHCCCCCCCEECCCCHHHCCCCCCCCEEEEECCCCEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9274029; 9384377 [H]