Definition Pelobacter propionicus DSM 2379 chromosome, complete genome.
Accession NC_008609
Length 4,008,000

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The map label for this gene is ybbP [H]

Identifier: 118581052

GI number: 118581052

Start: 2868214

End: 2869629

Strand: Reverse

Name: ybbP [H]

Synonym: Ppro_2640

Alternate gene names: 118581052

Gene position: 2869629-2868214 (Counterclockwise)

Preceding gene: 118581054

Following gene: 118581051

Centisome position: 71.6

GC content: 61.16

Gene sequence:

>1416_bases
GTGGCGCCACCATTCATCCGCATTCAGGATATTGCCGACATCCTGATCATGACCTTCCTCCTGTACCAGCTCTACTCCTG
GTTCTATCGCACCCGTGCCATGCAGGTCCTGCTGGGGCTGGGCGTGGTGACCCTGATCTACTTCGCCACCCGCTTTCTCG
GGCTGTATATGACCAGCTGGATACTCCAGGAGCTGGGCACGGTCCTGATCATCCTGCTGATCGTGGTGTTCCAGGCGGAG
ATCCGCCAGGCGCTCTACCGCTTCAGTCTGTTGCGCCACCTGTTCGAGCGGCGCAATGAAGTGCGTCCCAGTCCCTTTCA
GGATATTGTTGAAACCCTCTTCTGTCTGGCTGCCAAGCGCACCGGAGCGCTTCTGGTCTTCGAGCGCAACGACCCGTTGG
GTGATCTGATGCTGAACGGTGTCAAGATGGACTGTCGCATCAGTTCCCAGATCCTGGAGACCGTCTTCACCGACGGCACT
CCGCTCCACGACGGCGCGGCCCTGGTCCGCGGCGAGCGCATTGCCGTGGCTTCCTGCCACCTGCCGCTGTCGGTCAATCC
GGAAATCCCCCAGTACCTGGGGACGCGCCATCGCGCGGCCCTGGGGCTCTCCGAGCGCACCGACGCCGTGGTGGCCGTGG
TTTCCGAGGAGCGCGGTACGGTGTCGCTGGCAGTGGGCACCGAACTGCGCCCCTACGACACTCCGGGAGAACTGATCGCG
GCCCTGGAAGGGCTGTTCGCTCCGCATCTTGAAAAGCCGCATATCACCCACGGCCTGCACCTGTTCAGCAATCTGATGCC
GAAAACGGCAATCCTGCTGATTGTGGCTACGCTTTGGGCACTGATCAGTTCGCGACAGGGACAGATCATCACGGTAAGCG
CTCCGGTCAGGCTGCACGGCATACCGGATCGCCTGGCCTTGGTGCGCAGCGCTCCCGAAGAGGTGGATGTACAGCTCAAG
TCGTTTTCCATCCTGACGCCGCTCCCCTCCAAGCTGGATATTTCCGCCGACATAGACCTCTCCTCCGTCCGCCAGGGACA
GGCCAATGTCAGGGTCAAGAACACCGATTTCAGGCTCCCCTCGGGAATGGAGGTAACGTCTGTCACGCCCTCATCCATCA
GGGTGGTGACCGATCGCAAGGAGCGCAGAAGGGTGCCGGTGCGGGTGGCATTACGCAGAAACACGGGGCACGGATTGCGG
GGAATGAAAATCGTGGCTGACCCGGACTGGGTCGAGGTTGAGGGGCCGGCGGCCCAGGTTCAACGCATCGATGCGGTTGT
TACCGAGGAAGTGGATGCCGGCCGTCTGATCAGGGGGCAGGACTATCGCCGGAGCCTGCTGCCGCCGGATAACAATATAT
CCGTTCTGCGGGACGAACCGGTTGTCGTGCGACTGATTTCTCGTGAAAAAAAATAA

Upstream 100 bases:

>100_bases
CAGAGAACACCAGCAAAAACGGCTTCTGCCCGCGTGAAGCCCCGCGATCCGCTGACCTGCCTCAGGGGCGCAAGTTACGC
ATTGAAAGGGAGTCTGACCC

Downstream 100 bases:

>100_bases
TAATTCGGATTGCTTGGCCTGCTTGATGCATGGCAAAACAGGGCTGGAAGGACATTGCAATTGACTTTGCATACTTTTTG
TTATATAGAGTATAGCCATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 471; Mature: 470

Protein sequence:

>471_residues
MAPPFIRIQDIADILIMTFLLYQLYSWFYRTRAMQVLLGLGVVTLIYFATRFLGLYMTSWILQELGTVLIILLIVVFQAE
IRQALYRFSLLRHLFERRNEVRPSPFQDIVETLFCLAAKRTGALLVFERNDPLGDLMLNGVKMDCRISSQILETVFTDGT
PLHDGAALVRGERIAVASCHLPLSVNPEIPQYLGTRHRAALGLSERTDAVVAVVSEERGTVSLAVGTELRPYDTPGELIA
ALEGLFAPHLEKPHITHGLHLFSNLMPKTAILLIVATLWALISSRQGQIITVSAPVRLHGIPDRLALVRSAPEEVDVQLK
SFSILTPLPSKLDISADIDLSSVRQGQANVRVKNTDFRLPSGMEVTSVTPSSIRVVTDRKERRRVPVRVALRRNTGHGLR
GMKIVADPDWVEVEGPAAQVQRIDAVVTEEVDAGRLIRGQDYRRSLLPPDNNISVLRDEPVVVRLISREKK

Sequences:

>Translated_471_residues
MAPPFIRIQDIADILIMTFLLYQLYSWFYRTRAMQVLLGLGVVTLIYFATRFLGLYMTSWILQELGTVLIILLIVVFQAE
IRQALYRFSLLRHLFERRNEVRPSPFQDIVETLFCLAAKRTGALLVFERNDPLGDLMLNGVKMDCRISSQILETVFTDGT
PLHDGAALVRGERIAVASCHLPLSVNPEIPQYLGTRHRAALGLSERTDAVVAVVSEERGTVSLAVGTELRPYDTPGELIA
ALEGLFAPHLEKPHITHGLHLFSNLMPKTAILLIVATLWALISSRQGQIITVSAPVRLHGIPDRLALVRSAPEEVDVQLK
SFSILTPLPSKLDISADIDLSSVRQGQANVRVKNTDFRLPSGMEVTSVTPSSIRVVTDRKERRRVPVRVALRRNTGHGLR
GMKIVADPDWVEVEGPAAQVQRIDAVVTEEVDAGRLIRGQDYRRSLLPPDNNISVLRDEPVVVRLISREKK
>Mature_470_residues
APPFIRIQDIADILIMTFLLYQLYSWFYRTRAMQVLLGLGVVTLIYFATRFLGLYMTSWILQELGTVLIILLIVVFQAEI
RQALYRFSLLRHLFERRNEVRPSPFQDIVETLFCLAAKRTGALLVFERNDPLGDLMLNGVKMDCRISSQILETVFTDGTP
LHDGAALVRGERIAVASCHLPLSVNPEIPQYLGTRHRAALGLSERTDAVVAVVSEERGTVSLAVGTELRPYDTPGELIAA
LEGLFAPHLEKPHITHGLHLFSNLMPKTAILLIVATLWALISSRQGQIITVSAPVRLHGIPDRLALVRSAPEEVDVQLKS
FSILTPLPSKLDISADIDLSSVRQGQANVRVKNTDFRLPSGMEVTSVTPSSIRVVTDRKERRRVPVRVALRRNTGHGLRG
MKIVADPDWVEVEGPAAQVQRIDAVVTEEVDAGRLIRGQDYRRSLLPPDNNISVLRDEPVVVRLISREKK

Specific function: Unknown

COG id: COG1624

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014046
- InterPro:   IPR003390 [H]

Pfam domain/function: PF02457 DisA_N [H]

EC number: NA

Molecular weight: Translated: 52597; Mature: 52466

Theoretical pI: Translated: 9.30; Mature: 9.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAPPFIRIQDIADILIMTFLLYQLYSWFYRTRAMQVLLGLGVVTLIYFATRFLGLYMTSW
CCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILQELGTVLIILLIVVFQAEIRQALYRFSLLRHLFERRNEVRPSPFQDIVETLFCLAAKR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCC
TGALLVFERNDPLGDLMLNGVKMDCRISSQILETVFTDGTPLHDGAALVRGERIAVASCH
CCEEEEEECCCCHHHHHHCCEEEEHHHHHHHHHHHHCCCCCCCCCHHHHCCCEEEEEEEC
LPLSVNPEIPQYLGTRHRAALGLSERTDAVVAVVSEERGTVSLAVGTELRPYDTPGELIA
CCCCCCCCCHHHHCCHHHHHCCCCCCCCEEEEEEECCCCEEEEEECCCCCCCCCHHHHHH
ALEGLFAPHLEKPHITHGLHLFSNLMPKTAILLIVATLWALISSRQGQIITVSAPVRLHG
HHHHHHCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCEEEEECCEEECC
IPDRLALVRSAPEEVDVQLKSFSILTPLPSKLDISADIDLSSVRQGQANVRVKNTDFRLP
CCHHHHHHHCCCHHHCEEEEEEEEECCCCCCCCCCCCCCHHHHCCCCCCEEEECCCCCCC
SGMEVTSVTPSSIRVVTDRKERRRVPVRVALRRNTGHGLRGMKIVADPDWVEVEGPAAQV
CCCEEEEECCCCEEEEECCHHHCCCCEEEEEECCCCCCCCCEEEEECCCEEEECCCHHHH
QRIDAVVTEEVDAGRLIRGQDYRRSLLPPDNNISVLRDEPVVVRLISREKK
HHHHHHHHCCCCCCCEECCCCHHHCCCCCCCCEEEEECCCCEEEEECCCCC
>Mature Secondary Structure 
APPFIRIQDIADILIMTFLLYQLYSWFYRTRAMQVLLGLGVVTLIYFATRFLGLYMTSW
CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILQELGTVLIILLIVVFQAEIRQALYRFSLLRHLFERRNEVRPSPFQDIVETLFCLAAKR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCC
TGALLVFERNDPLGDLMLNGVKMDCRISSQILETVFTDGTPLHDGAALVRGERIAVASCH
CCEEEEEECCCCHHHHHHCCEEEEHHHHHHHHHHHHCCCCCCCCCHHHHCCCEEEEEEEC
LPLSVNPEIPQYLGTRHRAALGLSERTDAVVAVVSEERGTVSLAVGTELRPYDTPGELIA
CCCCCCCCCHHHHCCHHHHHCCCCCCCCEEEEEEECCCCEEEEEECCCCCCCCCHHHHHH
ALEGLFAPHLEKPHITHGLHLFSNLMPKTAILLIVATLWALISSRQGQIITVSAPVRLHG
HHHHHHCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCEEEEECCEEECC
IPDRLALVRSAPEEVDVQLKSFSILTPLPSKLDISADIDLSSVRQGQANVRVKNTDFRLP
CCHHHHHHHCCCHHHCEEEEEEEEECCCCCCCCCCCCCCHHHHCCCCCCEEEECCCCCCC
SGMEVTSVTPSSIRVVTDRKERRRVPVRVALRRNTGHGLRGMKIVADPDWVEVEGPAAQV
CCCEEEEECCCCEEEEECCHHHCCCCEEEEEECCCCCCCCCEEEEECCCEEEECCCHHHH
QRIDAVVTEEVDAGRLIRGQDYRRSLLPPDNNISVLRDEPVVVRLISREKK
HHHHHHHHCCCCCCCEECCCCHHHCCCCCCCCEEEEECCCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9274029; 9384377 [H]