Definition Pelobacter propionicus DSM 2379 chromosome, complete genome.
Accession NC_008609
Length 4,008,000

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The map label for this gene is 118581019

Identifier: 118581019

GI number: 118581019

Start: 2833411

End: 2834607

Strand: Direct

Name: 118581019

Synonym: Ppro_2607

Alternate gene names: NA

Gene position: 2833411-2834607 (Clockwise)

Preceding gene: 118581018

Following gene: 118581020

Centisome position: 70.69

GC content: 61.49

Gene sequence:

>1197_bases
ATGAGCAAGGTACTGATTATCGGAGCAGGCGGAGTCGGCAGCGTCGTCACCCACAAGTGTGCCCAGCGGCGGGACATCTT
CAGCGAGATCACCCTAGCCTCGCGGACCAAGAGCAAGTGCGACGCCATCGCGGCCCAGTTAGGCAACAGCATCAACACCG
CCCGGGTTGACGCCGACAATGTCCCGGAACTGGTGTCCCTGCTCAGACAGGTTCAGCCAAAACTGGTCATCAATGTCGCC
CTCCCCTACCAGGACCTGACCATCATGGATGCCTGCCTGGAAACCGGTGTGAACTACCTGGACACCGCCAACTACGAGCC
CATCGACACGGCAAAATTCGAGTATTCCTGGCAGTGGGCCTACCAGGAGCGCTTCAAAGACGCCGGCCTGATGGCACTTC
TGGGCTCCGGCTTCGACCCGGGGGTGACCAACGTCTACACCGCCCTGGCGGCGAAAAAGCACCTGGACGAGGTTCAGGAG
ATCGACATCATCGATGCCAACGCCGGCTCCCACGGCCAGCCCTTCGCCACCAACTTCAACCCGGAGATCAACATCCGCGA
GGTGACCGCCATCTGCCGCCACTGGGAGAACGGCCAGTGGGTGGAGTCCGGCGCCCTGGCCACTAAACATTCCTTCGACT
TTCCCGAGGGGATCGGCCCCATGAACATCTACCGCATGTACCATGAGGAGATGGAGTCGCTGGTCAAACATATCCCCAGC
ATCAAAAAGGCCCAGTTCTGGATGACCTTCTCGGACAACTACCTGAAGCACCTGGAGGTGCTGCAGAACGTGGGCATGAC
CCGCATCGACGAGGTGGAGTTCCAGGGGCAGAAGATCGTGCCGATCCAGTTTCTGAAGGCGCTCCTCCCCGACCCCGGCT
CCCTGGGTCCCCTGACCAAGGGGAAGACCTGCATCGGCGTCATCGCCCGCGGGCTGAAGGACGGCAAACGAAGGCAGGTC
TACATCTACAACATCTGCGACCACCAGGAGTGCTACCGGGAGGTCAGCTCCCAGGCCATCAGCTACACCACCGGCGTGCC
GGCGGTGGTGGGGGCGATCATGATGCTGACCAACAAGTGGCACGGAGCTGGCGTCTTCAACATGGAGCAGTTCGATCCCG
AACCGTTCCTGGATGAACTGGGGCCCATGGGGCTGCCCACCGTGGTGGTGGATGGCGGCGACTGGCCCGAGCTGTAA

Upstream 100 bases:

>100_bases
GGCCTGAAGAGGGTAACGGACCGGAACAAACGGTATAATTCTTATTCAGGCAGGCAATTCGCTGCCGTTCGATTCATGGC
AGCAGGAGGAGCGTACAGAT

Downstream 100 bases:

>100_bases
CCATCAGACCGGATTTGGCGGTTCACACCTGCCGTCCCCTGGTTGATCCACTATTCCATCAAGAAGGAGTATCAGCATGA
AGCGCCTGGTCTGCATCTGC

Product: saccharopine dehydrogenase

Products: L-lysine; 2-oxoglutarate; NADH; H+

Alternate protein names: Carboxynorspermidine Dehydrogenase; Saccharopine Dehydrogenase-Like Protein; Carboxynorspermide Hydratase; Saccharopine Dehydrogenase Family Protein; Acyl Carrier Protein

Number of amino acids: Translated: 398; Mature: 397

Protein sequence:

>398_residues
MSKVLIIGAGGVGSVVTHKCAQRRDIFSEITLASRTKSKCDAIAAQLGNSINTARVDADNVPELVSLLRQVQPKLVINVA
LPYQDLTIMDACLETGVNYLDTANYEPIDTAKFEYSWQWAYQERFKDAGLMALLGSGFDPGVTNVYTALAAKKHLDEVQE
IDIIDANAGSHGQPFATNFNPEINIREVTAICRHWENGQWVESGALATKHSFDFPEGIGPMNIYRMYHEEMESLVKHIPS
IKKAQFWMTFSDNYLKHLEVLQNVGMTRIDEVEFQGQKIVPIQFLKALLPDPGSLGPLTKGKTCIGVIARGLKDGKRRQV
YIYNICDHQECYREVSSQAISYTTGVPAVVGAIMMLTNKWHGAGVFNMEQFDPEPFLDELGPMGLPTVVVDGGDWPEL

Sequences:

>Translated_398_residues
MSKVLIIGAGGVGSVVTHKCAQRRDIFSEITLASRTKSKCDAIAAQLGNSINTARVDADNVPELVSLLRQVQPKLVINVA
LPYQDLTIMDACLETGVNYLDTANYEPIDTAKFEYSWQWAYQERFKDAGLMALLGSGFDPGVTNVYTALAAKKHLDEVQE
IDIIDANAGSHGQPFATNFNPEINIREVTAICRHWENGQWVESGALATKHSFDFPEGIGPMNIYRMYHEEMESLVKHIPS
IKKAQFWMTFSDNYLKHLEVLQNVGMTRIDEVEFQGQKIVPIQFLKALLPDPGSLGPLTKGKTCIGVIARGLKDGKRRQV
YIYNICDHQECYREVSSQAISYTTGVPAVVGAIMMLTNKWHGAGVFNMEQFDPEPFLDELGPMGLPTVVVDGGDWPEL
>Mature_397_residues
SKVLIIGAGGVGSVVTHKCAQRRDIFSEITLASRTKSKCDAIAAQLGNSINTARVDADNVPELVSLLRQVQPKLVINVAL
PYQDLTIMDACLETGVNYLDTANYEPIDTAKFEYSWQWAYQERFKDAGLMALLGSGFDPGVTNVYTALAAKKHLDEVQEI
DIIDANAGSHGQPFATNFNPEINIREVTAICRHWENGQWVESGALATKHSFDFPEGIGPMNIYRMYHEEMESLVKHIPSI
KKAQFWMTFSDNYLKHLEVLQNVGMTRIDEVEFQGQKIVPIQFLKALLPDPGSLGPLTKGKTCIGVIARGLKDGKRRQVY
IYNICDHQECYREVSSQAISYTTGVPAVVGAIMMLTNKWHGAGVFNMEQFDPEPFLDELGPMGLPTVVVDGGDWPEL

Specific function: Unknown

COG id: COG1748

COG function: function code E; Saccharopine dehydrogenase and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.5.1.7

Molecular weight: Translated: 44172; Mature: 44041

Theoretical pI: Translated: 5.13; Mature: 5.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKVLIIGAGGVGSVVTHKCAQRRDIFSEITLASRTKSKCDAIAAQLGNSINTARVDADN
CCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCC
VPELVSLLRQVQPKLVINVALPYQDLTIMDACLETGVNYLDTANYEPIDTAKFEYSWQWA
HHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHCCCCHHCCCCCCCCCCCEEEEEEEHH
YQERFKDAGLMALLGSGFDPGVTNVYTALAAKKHLDEVQEIDIIDANAGSHGQPFATNFN
HHHHHCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCEEEECCCCCCCCCCCCCCC
PEINIREVTAICRHWENGQWVESGALATKHSFDFPEGIGPMNIYRMYHEEMESLVKHIPS
CCCCHHHHHHHHHHCCCCCEEECCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
IKKAQFWMTFSDNYLKHLEVLQNVGMTRIDEVEFQGQKIVPIQFLKALLPDPGSLGPLTK
CCCEEEEEEECHHHHHHHHHHHHCCCCEEHHHHCCCCEECHHHHHHHHCCCCCCCCCCCC
GKTCIGVIARGLKDGKRRQVYIYNICDHQECYREVSSQAISYTTGVPAVVGAIMMLTNKW
CCHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC
HGAGVFNMEQFDPEPFLDELGPMGLPTVVVDGGDWPEL
CCCCCCCHHHCCCCHHHHHHCCCCCCEEEECCCCCCCC
>Mature Secondary Structure 
SKVLIIGAGGVGSVVTHKCAQRRDIFSEITLASRTKSKCDAIAAQLGNSINTARVDADN
CCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCC
VPELVSLLRQVQPKLVINVALPYQDLTIMDACLETGVNYLDTANYEPIDTAKFEYSWQWA
HHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHCCCCHHCCCCCCCCCCCEEEEEEEHH
YQERFKDAGLMALLGSGFDPGVTNVYTALAAKKHLDEVQEIDIIDANAGSHGQPFATNFN
HHHHHCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCEEEECCCCCCCCCCCCCCC
PEINIREVTAICRHWENGQWVESGALATKHSFDFPEGIGPMNIYRMYHEEMESLVKHIPS
CCCCHHHHHHHHHHCCCCCEEECCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
IKKAQFWMTFSDNYLKHLEVLQNVGMTRIDEVEFQGQKIVPIQFLKALLPDPGSLGPLTK
CCCEEEEEEECHHHHHHHHHHHHCCCCEEHHHHCCCCEECHHHHHHHHCCCCCCCCCCCC
GKTCIGVIARGLKDGKRRQVYIYNICDHQECYREVSSQAISYTTGVPAVVGAIMMLTNKW
CCHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC
HGAGVFNMEQFDPEPFLDELGPMGLPTVVVDGGDWPEL
CCCCCCCHHHCCCCHHHHHHCCCCCCEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: N6-(L-1,3-dicarboxypropyl)-L-lysine; NAD+; H2O

Specific reaction: N6-(L-1,3-dicarboxypropyl)-L-lysine + NAD+ + H2O = L-lysine + 2-oxoglutarate + NADH + H+

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA