| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
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The map label for this gene is mcp3 [H]
Identifier: 118581002
GI number: 118581002
Start: 2808532
End: 2810559
Strand: Reverse
Name: mcp3 [H]
Synonym: Ppro_2590
Alternate gene names: 118581002
Gene position: 2810559-2808532 (Counterclockwise)
Preceding gene: 118581003
Following gene: 118581001
Centisome position: 70.12
GC content: 62.23
Gene sequence:
>2028_bases ATGGGTTTTCTGGGTTTTGGAAAGAAGCAGCTCGCCGGTTCGGGTGTTATCGCTCTCCAGAGCAGCGGCTCTGCTCTGGC GGGCGATGTGGCCAAGATTCGTATCTCTCCCACGTTCGTCAGCGCCTACGTCTCACCCCACATCGACATCGACCGGGTTG CCAGGGATTTGACCTCCCGCTTTCCCGGCGTGCCCATGATGATCTGCAGTACCGCCGGCGAGCTGCACGCCGACGCCGGG CGGCTGTACTGCTCCACCGGCAATCGCTGGGATCGGGTGGTGGTGCACTGCTTCGACGCGTCCCTCATAGCGTCCGCCCA GGTGGTCAGCGTTCCCCTGGCGTGCGAAGACCTGCGCCGCGGCAACGTTGAAATGTCCCTCAAGGACCGCGTGGAACGCA TTTCCGCCTCCATCGCCGGGCTCAAGGTGGACATGGAGATCGACTACCGCAATACACTGGCCTACGTGCTCTTCGACGGA CTCTCCGCCTCAGAATCCTTCTTCATGGAAGCACTGTACGAATCGGGCCGTTTTCCCTGCCTGTTCGTGGGGGGATCGGC CGGTGGCACCTTTGATTTCCGCACTACCTGGCTGCATGACGGCAAGCGCAAGCTGGAGAACCATGCCCTGGTCGCCTTTG TCAAGATGGCGCCAGGCGTGCGTTTCGGGGTCCTGAAGAGCCAGAATTTCGAGCCTGCCGGCAGCAGCTTCAACGTTCTC TCCGCGTCGGTGGAGCAGCGTTACGTGACTCAGGTGGTTGACCGCCAGGGGCACATCAGCTCCCTTGTGGAGGCGCTCTG CACTGCCCTGAAGTGTTCTCCCGCCAACCTTGAGGCCCAGTTGGCCGGGTACTCCTTTGCCATCATGGTTGGCAAGGAGC TGTTCGTGCGCTCCATCTCCAAGCTGGACATTGCCAATAACAGGGTGCATTTCTTCTGTGATATCGCCTCGGGCGAGGAA CTGCTGCTGGTACGCAGGACAGGGCTGGTCAGTAACACGCAGAAGGACTTCAGCCGCTTCATGCAGGGAAAGCCGGGGAA CCCGGTGGCCGGCATTCTCAACGACTGCATCCTGCGCCGGCTGAACAACGAGCGCGAACTCTCCGAAATGGGGCGGGTCA TGCCGGAAGGAGCGGTGGCCGGCTTTTCCACCTTCGGCGAAATCCTTGGGCTGAACCTGAATCAGACCCTGACCGCCATC TTCTTCTTCCGGGTGCCGGCCGGTACAGCGTTCCGGGACGAGTACGTGGACAACTTCGTCGCCCATTACGGTGAATTCAA GGCCTTCTTCCTGCGGCGACAGGTTTCCAAGCTGAGCGGCCTGTCCCAGGTCATGATGAAACAGATCAACGACTTCCGGG GACAGCACTTCGAGAGCCGTTTGGACGCATCCGGCTTGGAGCCGGCCATGGCCCAGCTGTTCACCGGCCTGAACGACCTG GGCCAGGCCCTGAACGAGGCCAACGCCCAGCAGGACGCCATGGCCTGCCAGCTGGAGGCGTGCGCCAATGACCTGTACGG CTCCGTGGATGACCTGGCCTCCCACATCGAGCAGCAGGTTCAGGCGATCCACCAGGTGGGTGAAAATGTCACCGGCCTGA CCGGCAAAGCCACTGCCTCAGCCACCAGTGCGCGGGGTCTGGCCGATGCCAGCAGCCGCATCCAGAGCGTGGTGGAAATC ATCCAGCAGATTGCCGACCAGACCAACCTCCTGGCTTTGAACGCGGCCATCGAGGCGGCCCGTGCCGGGGACAGCGGCCG TGGTTTCGCGGTGGTTGCCGACGAGGTGCGCAAGCTGGCTGAAAAGTCCCGCACCAGTGCCATGGAGATCGGCAGCAATA TCTCCCACCTGGCTTCCGAGATCAGCGCGGTTGCCAACGAGATCGAATCCCAGTCCAGCGATGTGGGCCGCCTCTCGTCG CTTTTGGCCGTCATCGAGGAGTCCAGCGCGCGCACGACCGAGACGGCCGGCCACACAAAAGGGGTGGCCGACACACTGAA GAATCTGACAACGGCCGCTCACGCCTGA
Upstream 100 bases:
>100_bases CAACAGGGACATGCTGCCATGAAAATGTCTGCTGCGCATGCTAGAAGGGTGTGCACGGCGTTGTCGGACGGTAGCTGTCG CTCGAAATAAGGAGATTGCC
Downstream 100 bases:
>100_bases ATCTGACGGGAGGAGTGCGAAGCTCCTGCCGTTTTAAGTTCTGCCGGCTGCTTCCGAGAGACGGTGTCCGGCGGTCGGGG CTGACCATGGTTTTGATTGC
Product: methyl-accepting chemotaxis sensory transducer
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 675; Mature: 674
Protein sequence:
>675_residues MGFLGFGKKQLAGSGVIALQSSGSALAGDVAKIRISPTFVSAYVSPHIDIDRVARDLTSRFPGVPMMICSTAGELHADAG RLYCSTGNRWDRVVVHCFDASLIASAQVVSVPLACEDLRRGNVEMSLKDRVERISASIAGLKVDMEIDYRNTLAYVLFDG LSASESFFMEALYESGRFPCLFVGGSAGGTFDFRTTWLHDGKRKLENHALVAFVKMAPGVRFGVLKSQNFEPAGSSFNVL SASVEQRYVTQVVDRQGHISSLVEALCTALKCSPANLEAQLAGYSFAIMVGKELFVRSISKLDIANNRVHFFCDIASGEE LLLVRRTGLVSNTQKDFSRFMQGKPGNPVAGILNDCILRRLNNERELSEMGRVMPEGAVAGFSTFGEILGLNLNQTLTAI FFFRVPAGTAFRDEYVDNFVAHYGEFKAFFLRRQVSKLSGLSQVMMKQINDFRGQHFESRLDASGLEPAMAQLFTGLNDL GQALNEANAQQDAMACQLEACANDLYGSVDDLASHIEQQVQAIHQVGENVTGLTGKATASATSARGLADASSRIQSVVEI IQQIADQTNLLALNAAIEAARAGDSGRGFAVVADEVRKLAEKSRTSAMEIGSNISHLASEISAVANEIESQSSDVGRLSS LLAVIEESSARTTETAGHTKGVADTLKNLTTAAHA
Sequences:
>Translated_675_residues MGFLGFGKKQLAGSGVIALQSSGSALAGDVAKIRISPTFVSAYVSPHIDIDRVARDLTSRFPGVPMMICSTAGELHADAG RLYCSTGNRWDRVVVHCFDASLIASAQVVSVPLACEDLRRGNVEMSLKDRVERISASIAGLKVDMEIDYRNTLAYVLFDG LSASESFFMEALYESGRFPCLFVGGSAGGTFDFRTTWLHDGKRKLENHALVAFVKMAPGVRFGVLKSQNFEPAGSSFNVL SASVEQRYVTQVVDRQGHISSLVEALCTALKCSPANLEAQLAGYSFAIMVGKELFVRSISKLDIANNRVHFFCDIASGEE LLLVRRTGLVSNTQKDFSRFMQGKPGNPVAGILNDCILRRLNNERELSEMGRVMPEGAVAGFSTFGEILGLNLNQTLTAI FFFRVPAGTAFRDEYVDNFVAHYGEFKAFFLRRQVSKLSGLSQVMMKQINDFRGQHFESRLDASGLEPAMAQLFTGLNDL GQALNEANAQQDAMACQLEACANDLYGSVDDLASHIEQQVQAIHQVGENVTGLTGKATASATSARGLADASSRIQSVVEI IQQIADQTNLLALNAAIEAARAGDSGRGFAVVADEVRKLAEKSRTSAMEIGSNISHLASEISAVANEIESQSSDVGRLSS LLAVIEESSARTTETAGHTKGVADTLKNLTTAAHA >Mature_674_residues GFLGFGKKQLAGSGVIALQSSGSALAGDVAKIRISPTFVSAYVSPHIDIDRVARDLTSRFPGVPMMICSTAGELHADAGR LYCSTGNRWDRVVVHCFDASLIASAQVVSVPLACEDLRRGNVEMSLKDRVERISASIAGLKVDMEIDYRNTLAYVLFDGL SASESFFMEALYESGRFPCLFVGGSAGGTFDFRTTWLHDGKRKLENHALVAFVKMAPGVRFGVLKSQNFEPAGSSFNVLS ASVEQRYVTQVVDRQGHISSLVEALCTALKCSPANLEAQLAGYSFAIMVGKELFVRSISKLDIANNRVHFFCDIASGEEL LLVRRTGLVSNTQKDFSRFMQGKPGNPVAGILNDCILRRLNNERELSEMGRVMPEGAVAGFSTFGEILGLNLNQTLTAIF FFRVPAGTAFRDEYVDNFVAHYGEFKAFFLRRQVSKLSGLSQVMMKQINDFRGQHFESRLDASGLEPAMAQLFTGLNDLG QALNEANAQQDAMACQLEACANDLYGSVDDLASHIEQQVQAIHQVGENVTGLTGKATASATSARGLADASSRIQSVVEII QQIADQTNLLALNAAIEAARAGDSGRGFAVVADEVRKLAEKSRTSAMEIGSNISHLASEISAVANEIESQSSDVGRLSSL LAVIEESSARTTETAGHTKGVADTLKNLTTAAHA
Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of
COG id: COG0840
COG function: function code NT; Methyl-accepting chemotaxis protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 methyl-accepting transducer domain [H]
Homologues:
Organism=Escherichia coli, GI1788195, Length=148, Percent_Identity=37.1621621621622, Blast_Score=82, Evalue=1e-16, Organism=Escherichia coli, GI2367378, Length=137, Percent_Identity=39.4160583941606, Blast_Score=80, Evalue=4e-16, Organism=Escherichia coli, GI1787690, Length=176, Percent_Identity=33.5227272727273, Blast_Score=77, Evalue=3e-15, Organism=Escherichia coli, GI1789453, Length=130, Percent_Identity=40.7692307692308, Blast_Score=77, Evalue=4e-15, Organism=Escherichia coli, GI1788194, Length=129, Percent_Identity=40.3100775193798, Blast_Score=76, Evalue=9e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004090 - InterPro: IPR004089 - InterPro: IPR003660 [H]
Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal [H]
EC number: NA
Molecular weight: Translated: 72620; Mature: 72489
Theoretical pI: Translated: 6.05; Mature: 6.05
Prosite motif: PS50111 CHEMOTAXIS_TRANSDUC_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFLGFGKKQLAGSGVIALQSSGSALAGDVAKIRISPTFVSAYVSPHIDIDRVARDLTSR CCCCCCCHHHHCCCCEEEEECCCCCCCCCEEEEEECHHHHHHHHCCCCCHHHHHHHHHHH FPGVPMMICSTAGELHADAGRLYCSTGNRWDRVVVHCFDASLIASAQVVSVPLACEDLRR CCCCCEEEECCCCCCCCCCCEEEECCCCCCCCCEEEEECHHHHHCHHHEECCHHHHHHHC GNVEMSLKDRVERISASIAGLKVDMEIDYRNTLAYVLFDGLSASESFFMEALYESGRFPC CCCEEHHHHHHHHHHHHHHCEEEEEEECHHHHEEEHHCCCCCCHHHHHHHHHHHCCCCCE LFVGGSAGGTFDFRTTWLHDGKRKLENHALVAFVKMAPGVRFGVLKSQNFEPAGSSFNVL EEEECCCCCCCCEEEHHHHCHHHHHHCHHHEEEEECCCCCEEEEEECCCCCCCCCCCHHH SASVEQRYVTQVVDRQGHISSLVEALCTALKCSPANLEAQLAGYSFAIMVGKELFVRSIS HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCEEECCCEEEEEHHHHHHHHHHHH KLDIANNRVHFFCDIASGEELLLVRRTGLVSNTQKDFSRFMQGKPGNPVAGILNDCILRR HHHCCCCCEEEEEEECCCCEEEEEEECCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHH LNNERELSEMGRVMPEGAVAGFSTFGEILGLNLNQTLTAIFFFRVPAGTAFRDEYVDNFV HCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHEEECCCCCCHHHHHHHHHH AHYGEFKAFFLRRQVSKLSGLSQVMMKQINDFRGQHFESRLDASGLEPAMAQLFTGLNDL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCHHHHHHHHCHHHH GQALNEANAQQDAMACQLEACANDLYGSVDDLASHIEQQVQAIHQVGENVTGLTGKATAS HHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC ATSARGLADASSRIQSVVEIIQQIADQTNLLALNAAIEAARAGDSGRGFAVVADEVRKLA CHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHCCCCCCCEEEEHHHHHHHH EKSRTSAMEIGSNISHLASEISAVANEIESQSSDVGRLSSLLAVIEESSARTTETAGHTK HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC GVADTLKNLTTAAHA HHHHHHHHHHHHCCC >Mature Secondary Structure GFLGFGKKQLAGSGVIALQSSGSALAGDVAKIRISPTFVSAYVSPHIDIDRVARDLTSR CCCCCCHHHHCCCCEEEEECCCCCCCCCEEEEEECHHHHHHHHCCCCCHHHHHHHHHHH FPGVPMMICSTAGELHADAGRLYCSTGNRWDRVVVHCFDASLIASAQVVSVPLACEDLRR CCCCCEEEECCCCCCCCCCCEEEECCCCCCCCCEEEEECHHHHHCHHHEECCHHHHHHHC GNVEMSLKDRVERISASIAGLKVDMEIDYRNTLAYVLFDGLSASESFFMEALYESGRFPC CCCEEHHHHHHHHHHHHHHCEEEEEEECHHHHEEEHHCCCCCCHHHHHHHHHHHCCCCCE LFVGGSAGGTFDFRTTWLHDGKRKLENHALVAFVKMAPGVRFGVLKSQNFEPAGSSFNVL EEEECCCCCCCCEEEHHHHCHHHHHHCHHHEEEEECCCCCEEEEEECCCCCCCCCCCHHH SASVEQRYVTQVVDRQGHISSLVEALCTALKCSPANLEAQLAGYSFAIMVGKELFVRSIS HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCEEECCCEEEEEHHHHHHHHHHHH KLDIANNRVHFFCDIASGEELLLVRRTGLVSNTQKDFSRFMQGKPGNPVAGILNDCILRR HHHCCCCCEEEEEEECCCCEEEEEEECCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHH LNNERELSEMGRVMPEGAVAGFSTFGEILGLNLNQTLTAIFFFRVPAGTAFRDEYVDNFV HCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHEEECCCCCCHHHHHHHHHH AHYGEFKAFFLRRQVSKLSGLSQVMMKQINDFRGQHFESRLDASGLEPAMAQLFTGLNDL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCHHHHHHHHCHHHH GQALNEANAQQDAMACQLEACANDLYGSVDDLASHIEQQVQAIHQVGENVTGLTGKATAS HHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC ATSARGLADASSRIQSVVEIIQQIADQTNLLALNAAIEAARAGDSGRGFAVVADEVRKLA CHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHCCCCCCCEEEEHHHHHHHH EKSRTSAMEIGSNISHLASEISAVANEIESQSSDVGRLSSLLAVIEESSARTTETAGHTK HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC GVADTLKNLTTAAHA HHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10360571 [H]