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The map label for this gene is tapC [H]

Identifier: 118580924

GI number: 118580924

Start: 2720838

End: 2722055

Strand: Reverse

Name: tapC [H]

Synonym: Ppro_2512

Alternate gene names: 118580924

Gene position: 2722055-2720838 (Counterclockwise)

Preceding gene: 118580925

Following gene: 118580923

Centisome position: 67.92

GC content: 59.36

Gene sequence:

>1218_bases
ATGCCCAAGTTTACCTGGGAAGCACGCACCAAAACCGGCGGTGTCCAGAAGGGGACCATGGAGGCCGACAGTGTCACCAT
TGTCGAGGCCCAGCTGAAGAAGTACGGCTTTACCAACATAAGTATCAGCGAGGTTGCCAAGGGGATGTCCTTCAAGCTCC
CCTCCTTCGGGGGATCGGGCAAGGTCCAGACAAAGGAACTGGTCATCTTCACCCGCCAGTTCGCCACCATGATCGACTCG
GGCCTCCCCCTGGTGCAGTGCCTGGAGATCCTCTCCAGCCAGCAGGAGAACAAGACCTTCAAGGAGATACTCTACAAGGT
CAAGGAAAGCGTGGAGAGCGGCTCCACCTTTGCCGATGCCCTGGCCAAGCACCCCAAGGCCTTTGACCAGCTGTTCGTCA
ACCTGGTGGCTGCCGGCGAGGTGGGCGGTATCCTGGATACGATTCTGCAGCGCCTGGCCGCCTACATCGAGAAGGCCATG
AAGCTGAAGAAGCAGATCAAGGGCGCCATGGTCTACCCGCTCACCATCATGTCCATTGCGGTGATCGTCGTGGGGGTCAT
CCTGATCTTCGTCATCCCGACCTTTGCCAAGATGTTCCAGGACTTCGGCGGAGATCTGCCCGCTCCCACCAAGATCGTTA
TCGCTTTAAGCAACTTTCTGACCCGCTATATCATCGTGATTATCGCCCTGATCTACGGTCTTTTCTGGGTGTTCAAGAAG
TACTACGCCACCCCGGCGGGGCGGAAGACCGTCGACCGCTTGGCCCTCAAGGCGCCCATTGCCGGTCCGCTGATCCGCAA
GGTGGCGGTGGCCAAGTTCACCCGCACCCTGGGTACCATGGTGAGTTCCGGCGTTCCCATCATGGACGGCCTGGAGATCG
TTGCCAAGACGGCCGGAAACAAGATCGTCGAAGAGGCCATCTACGGGGTCCGGCAGGCCATCTCCGAGGGGAAGACCATG
GCTGAACCGCTGGCGGCCTGTGGCGTCTTTCCTCCCATGGTGGTGCAGATGATCGGCGTTGGCGAGGCCACCGGCGCCAT
GGATGCCATGCTGAACAAGATAGCCGATTTCTACGATGACGAGGTGGATGACGCTGTTTCGGCCATGACCGCCATGATGG
AGCCGCTGCTGATGGTCTTCCTGGGCACCACCGTGGGTGGTCTGGTCATTGCCATGTATCTGCCGATCTTCAAGCTGGCG
GGGACTGTCGGCGGATAA

Upstream 100 bases:

>100_bases
GCAGGACCCGGAAGAGTTGAAACAGATGCTCAGCAACCCGGCAACGAACCCGCAACGCCGTCCCCCTGGCCGCTGACTTT
ATTGATCAAGGAGAGTTTTT

Downstream 100 bases:

>100_bases
CCTATGTGGCGTGAACGGCAGCTGCGGATTTTTATCTATGCCAGGATTCTGGTCAGTTTCCTGTTTCTGGTTTCCACGGT
TGCGTTGATGCTGAAGGAGC

Product: type II secretion system protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 405; Mature: 404

Protein sequence:

>405_residues
MPKFTWEARTKTGGVQKGTMEADSVTIVEAQLKKYGFTNISISEVAKGMSFKLPSFGGSGKVQTKELVIFTRQFATMIDS
GLPLVQCLEILSSQQENKTFKEILYKVKESVESGSTFADALAKHPKAFDQLFVNLVAAGEVGGILDTILQRLAAYIEKAM
KLKKQIKGAMVYPLTIMSIAVIVVGVILIFVIPTFAKMFQDFGGDLPAPTKIVIALSNFLTRYIIVIIALIYGLFWVFKK
YYATPAGRKTVDRLALKAPIAGPLIRKVAVAKFTRTLGTMVSSGVPIMDGLEIVAKTAGNKIVEEAIYGVRQAISEGKTM
AEPLAACGVFPPMVVQMIGVGEATGAMDAMLNKIADFYDDEVDDAVSAMTAMMEPLLMVFLGTTVGGLVIAMYLPIFKLA
GTVGG

Sequences:

>Translated_405_residues
MPKFTWEARTKTGGVQKGTMEADSVTIVEAQLKKYGFTNISISEVAKGMSFKLPSFGGSGKVQTKELVIFTRQFATMIDS
GLPLVQCLEILSSQQENKTFKEILYKVKESVESGSTFADALAKHPKAFDQLFVNLVAAGEVGGILDTILQRLAAYIEKAM
KLKKQIKGAMVYPLTIMSIAVIVVGVILIFVIPTFAKMFQDFGGDLPAPTKIVIALSNFLTRYIIVIIALIYGLFWVFKK
YYATPAGRKTVDRLALKAPIAGPLIRKVAVAKFTRTLGTMVSSGVPIMDGLEIVAKTAGNKIVEEAIYGVRQAISEGKTM
AEPLAACGVFPPMVVQMIGVGEATGAMDAMLNKIADFYDDEVDDAVSAMTAMMEPLLMVFLGTTVGGLVIAMYLPIFKLA
GTVGG
>Mature_404_residues
PKFTWEARTKTGGVQKGTMEADSVTIVEAQLKKYGFTNISISEVAKGMSFKLPSFGGSGKVQTKELVIFTRQFATMIDSG
LPLVQCLEILSSQQENKTFKEILYKVKESVESGSTFADALAKHPKAFDQLFVNLVAAGEVGGILDTILQRLAAYIEKAMK
LKKQIKGAMVYPLTIMSIAVIVVGVILIFVIPTFAKMFQDFGGDLPAPTKIVIALSNFLTRYIIVIIALIYGLFWVFKKY
YATPAGRKTVDRLALKAPIAGPLIRKVAVAKFTRTLGTMVSSGVPIMDGLEIVAKTAGNKIVEEAIYGVRQAISEGKTMA
EPLAACGVFPPMVVQMIGVGEATGAMDAMLNKIADFYDDEVDDAVSAMTAMMEPLLMVFLGTTVGGLVIAMYLPIFKLAG
TVGG

Specific function: Involved in the translocation of the type IV pilin [H]

COG id: COG1459

COG function: function code NU; Type II secretory pathway, component PulF

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP F family [H]

Homologues:

Organism=Escherichia coli, GI1789724, Length=406, Percent_Identity=26.3546798029557, Blast_Score=195, Evalue=5e-51,
Organism=Escherichia coli, GI1786295, Length=402, Percent_Identity=27.363184079602, Blast_Score=170, Evalue=2e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003004
- InterPro:   IPR018076
- InterPro:   IPR001992 [H]

Pfam domain/function: PF00482 GSPII_F [H]

EC number: NA

Molecular weight: Translated: 43632; Mature: 43501

Theoretical pI: Translated: 9.56; Mature: 9.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
PKFTWEARTKTGGVQKGTMEADSVTIVEAQLKKYGFTNISISEVAKGMSFKLPSFGGSG
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCC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HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8820654 [H]