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The map label for this gene is yefM [H]

Identifier: 118580861

GI number: 118580861

Start: 2646885

End: 2647139

Strand: Reverse

Name: yefM [H]

Synonym: Ppro_2448

Alternate gene names: 118580861

Gene position: 2647139-2646885 (Counterclockwise)

Preceding gene: 118580862

Following gene: 118580860

Centisome position: 66.05

GC content: 49.02

Gene sequence:

>255_bases
ATGAGGGTTGTGAATTTTTCCGATGCACGCAATCATCTAAAACATGTGATCGACCAGACAATTGAAGATTCGGATTATAC
GATCATCTCAAGGCGGGATTCTCCAGGCGCCGTTCTCATGTCCCTCGACACTTTCAACAGCCTCATGGAGACCGTTCATC
TCCTGAAAACACCTGCCAACGCAGCCCACCTTGCCAAATCAATCGAACAGTACCGAGCGGGACAACTGGTACACGAAAAA
CTGACCGATGCCTGA

Upstream 100 bases:

>100_bases
CTCATCCATAAATGTTTTCAGGTGTAGGCGCTCAACAGTCCTTGACTGTTCCCAGCCAATGACGATATAGTTGTACAACT
AAAAGGACAAGAGGTGCGCC

Downstream 100 bases:

>100_bases
CCGACTGGTCTGGACATTCGCAGCCTGGGAAGACTATCAGTACTGGCAGACCCAGGATAAAAAGACGCTGAAACGCATCA
ACCTGCTGATCCGGGATGCC

Product: prevent-host-death family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 84; Mature: 84

Protein sequence:

>84_residues
MRVVNFSDARNHLKHVIDQTIEDSDYTIISRRDSPGAVLMSLDTFNSLMETVHLLKTPANAAHLAKSIEQYRAGQLVHEK
LTDA

Sequences:

>Translated_84_residues
MRVVNFSDARNHLKHVIDQTIEDSDYTIISRRDSPGAVLMSLDTFNSLMETVHLLKTPANAAHLAKSIEQYRAGQLVHEK
LTDA
>Mature_84_residues
MRVVNFSDARNHLKHVIDQTIEDSDYTIISRRDSPGAVLMSLDTFNSLMETVHLLKTPANAAHLAKSIEQYRAGQLVHEK
LTDA

Specific function: Part of a toxin-antitoxin (TA) module. A probable antitoxin for the putative mRNA interferase YeoB [H]

COG id: COG2161

COG function: function code D; Antitoxin of toxin-antitoxin stability system

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the YefM antitoxin family [H]

Homologues:

Organism=Escherichia coli, GI87082026, Length=75, Percent_Identity=40, Blast_Score=67, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006442 [H]

Pfam domain/function: PF02604 PhdYeFM [H]

EC number: NA

Molecular weight: Translated: 9447; Mature: 9447

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVVNFSDARNHLKHVIDQTIEDSDYTIISRRDSPGAVLMSLDTFNSLMETVHLLKTPAN
CCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCEEEEEHHHHHHHHHHHHHHHCCCH
AAHLAKSIEQYRAGQLVHEKLTDA
HHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRVVNFSDARNHLKHVIDQTIEDSDYTIISRRDSPGAVLMSLDTFNSLMETVHLLKTPAN
CCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCEEEEEHHHHHHHHHHHHHHHCCCH
AAHLAKSIEQYRAGQLVHEKLTDA
HHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]