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The map label for this gene is yibP [H]

Identifier: 118580824

GI number: 118580824

Start: 2609285

End: 2610499

Strand: Reverse

Name: yibP [H]

Synonym: Ppro_2410

Alternate gene names: 118580824

Gene position: 2610499-2609285 (Counterclockwise)

Preceding gene: 118580825

Following gene: 118580823

Centisome position: 65.13

GC content: 59.09

Gene sequence:

>1215_bases
ATGAGAGTTTCGTTACTGATACTGCTGGCGCTGCTGGTTGCCCTGCCTGTCCGGGGTGCGAATCCCAAGGACGAGCTCAA
GGGGGTCAAGCGCGAGATCAAGGTCAAGAAGCAGCTGATCACCAAGACCCGCAAGGTTGAGGCGGTCGTCTCCAGTGAGC
TGCGCGATATCAACCGCAACCTGGAGCAGAAGACATCGGAACTGGGAAGGCTGGACCGCGACCTGCAAGGGGTGGAATCC
AGCCTGGACAGGACCGGCCGTGACATAGGCCTGGCCACGGAAGATGCCAACCGCAAGAAGCAGGAGATTGTGCGCCGGCT
CTCCTCACTGTACAAGGCGGGTGAACTGGGCACGTTACGCATGTTCTTCTCCTCTGACTCCATACCTCGCATGGCCGAAA
ACTCCCGCTACATGAAATCGGTTGTGGAGAACGACAAAAAAATATTCGCGGAGTACAATGAAAAAATACGGCACCTGCGC
AGCCTGAAGGGTGATCTGGAGCGGGATGCGGCCCGCAAGGAACGGATCAAGAACGATATCGCCTTCAAGAAACGCGAGGT
CGAGCAGGAGAAGAGCAGGAAGGCCGCCTATCTGACCAAGGTGCGCAACGACCGGGCCAGCTACGAGGCCTCACTCAAGG
AACTCAACGCCAATGCCGGCCGGTTGCAGAGCATGCTGGCCCGTCTGGAGGCGCTGAGCCGCAAGCGACTCGCTTCGCGC
CACGCAAGAACAGCCAGAAAGCCGTCCACCAGAACACCCGGCAAGCCGGCAACCAGCCTGCCGGGCGATTCTCTCCCTCC
CGTTTCCGACCATGGTTTCGCATCCCAGCGCGGGCGCATGTCCCTGCCGGTGCGGGGCAGCATCATCGAGTCCTATGGCA
AACACAAACATCCCGAGTTCAACTCCTATACATTCAGCAAGGGGCTTTCCATCGCTGCCGGAGCCGGTTCGGAGATCAGG
TGCATCTATGATGGCACCGTGGTTTTTGCCGATTATTTCAAGGGATACGGCAACATGGTTATCGTGGACCACGGCGGCGG
CTACTTCAGCCTCTATGCCCATGCCTCGCGGATTCTCAAGCGGGTGGGAGCCCAGATTGCCAGAAACGATGCCGTAGCCA
CGGTGGGCGATGTGGACTCGAGCAGGGGCCCGCTCCTGTACTTCGAGATCAGGCATCAAGGAAGACCACTTGACCCGGCC
GGCTGGGTAAGATAA

Upstream 100 bases:

>100_bases
GCCTGTCGTTCCTTCCCCCCGAATATATCGGTGCACTGCTCCTGTCCGGGGTCCTGCTCGGCTTCATGGGCAGCCTGACA
TCGCTCAGGCGTTTCATCTG

Downstream 100 bases:

>100_bases
TCTCGATAGTTCGCGATCAGATCAGATAAACAGCATAGTTCATACAAGCGGAGGCGGAGGATGGTCAGCATGGGCAGTAA
AAAAAGACGGGTTTTTGCGG

Product: peptidase M23B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 404; Mature: 404

Protein sequence:

>404_residues
MRVSLLILLALLVALPVRGANPKDELKGVKREIKVKKQLITKTRKVEAVVSSELRDINRNLEQKTSELGRLDRDLQGVES
SLDRTGRDIGLATEDANRKKQEIVRRLSSLYKAGELGTLRMFFSSDSIPRMAENSRYMKSVVENDKKIFAEYNEKIRHLR
SLKGDLERDAARKERIKNDIAFKKREVEQEKSRKAAYLTKVRNDRASYEASLKELNANAGRLQSMLARLEALSRKRLASR
HARTARKPSTRTPGKPATSLPGDSLPPVSDHGFASQRGRMSLPVRGSIIESYGKHKHPEFNSYTFSKGLSIAAGAGSEIR
CIYDGTVVFADYFKGYGNMVIVDHGGGYFSLYAHASRILKRVGAQIARNDAVATVGDVDSSRGPLLYFEIRHQGRPLDPA
GWVR

Sequences:

>Translated_404_residues
MRVSLLILLALLVALPVRGANPKDELKGVKREIKVKKQLITKTRKVEAVVSSELRDINRNLEQKTSELGRLDRDLQGVES
SLDRTGRDIGLATEDANRKKQEIVRRLSSLYKAGELGTLRMFFSSDSIPRMAENSRYMKSVVENDKKIFAEYNEKIRHLR
SLKGDLERDAARKERIKNDIAFKKREVEQEKSRKAAYLTKVRNDRASYEASLKELNANAGRLQSMLARLEALSRKRLASR
HARTARKPSTRTPGKPATSLPGDSLPPVSDHGFASQRGRMSLPVRGSIIESYGKHKHPEFNSYTFSKGLSIAAGAGSEIR
CIYDGTVVFADYFKGYGNMVIVDHGGGYFSLYAHASRILKRVGAQIARNDAVATVGDVDSSRGPLLYFEIRHQGRPLDPA
GWVR
>Mature_404_residues
MRVSLLILLALLVALPVRGANPKDELKGVKREIKVKKQLITKTRKVEAVVSSELRDINRNLEQKTSELGRLDRDLQGVES
SLDRTGRDIGLATEDANRKKQEIVRRLSSLYKAGELGTLRMFFSSDSIPRMAENSRYMKSVVENDKKIFAEYNEKIRHLR
SLKGDLERDAARKERIKNDIAFKKREVEQEKSRKAAYLTKVRNDRASYEASLKELNANAGRLQSMLARLEALSRKRLASR
HARTARKPSTRTPGKPATSLPGDSLPPVSDHGFASQRGRMSLPVRGSIIESYGKHKHPEFNSYTFSKGLSIAAGAGSEIR
CIYDGTVVFADYFKGYGNMVIVDHGGGYFSLYAHASRILKRVGAQIARNDAVATVGDVDSSRGPLLYFEIRHQGRPLDPA
GWVR

Specific function: Unknown

COG id: COG4942

COG function: function code D; Membrane-bound metallopeptidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0756 [H]

Homologues:

Organism=Escherichia coli, GI87082297, Length=411, Percent_Identity=24.0875912408759, Blast_Score=126, Evalue=3e-30,
Organism=Escherichia coli, GI1789099, Length=119, Percent_Identity=34.453781512605, Blast_Score=72, Evalue=7e-14,
Organism=Escherichia coli, GI87082174, Length=174, Percent_Identity=27.5862068965517, Blast_Score=66, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF01551 Peptidase_M23 [H]

EC number: NA

Molecular weight: Translated: 45253; Mature: 45253

Theoretical pI: Translated: 10.75; Mature: 10.75

Prosite motif: PS00599 AA_TRANSFER_CLASS_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVSLLILLALLVALPVRGANPKDELKGVKREIKVKKQLITKTRKVEAVVSSELRDINRN
CCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LEQKTSELGRLDRDLQGVESSLDRTGRDIGLATEDANRKKQEIVRRLSSLYKAGELGTLR
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEE
MFFSSDSIPRMAENSRYMKSVVENDKKIFAEYNEKIRHLRSLKGDLERDAARKERIKNDI
EEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AFKKREVEQEKSRKAAYLTKVRNDRASYEASLKELNANAGRLQSMLARLEALSRKRLASR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
HARTARKPSTRTPGKPATSLPGDSLPPVSDHGFASQRGRMSLPVRGSIIESYGKHKHPEF
HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCC
NSYTFSKGLSIAAGAGSEIRCIYDGTVVFADYFKGYGNMVIVDHGGGYFSLYAHASRILK
CCEEHHCCCEEEECCCCCEEEEECCHHHHHHHHHCCCCEEEEECCCCEEHHHHHHHHHHH
RVGAQIARNDAVATVGDVDSSRGPLLYFEIRHQGRPLDPAGWVR
HHHHHHHHCCCEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCC
>Mature Secondary Structure
MRVSLLILLALLVALPVRGANPKDELKGVKREIKVKKQLITKTRKVEAVVSSELRDINRN
CCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LEQKTSELGRLDRDLQGVESSLDRTGRDIGLATEDANRKKQEIVRRLSSLYKAGELGTLR
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEE
MFFSSDSIPRMAENSRYMKSVVENDKKIFAEYNEKIRHLRSLKGDLERDAARKERIKNDI
EEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AFKKREVEQEKSRKAAYLTKVRNDRASYEASLKELNANAGRLQSMLARLEALSRKRLASR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
HARTARKPSTRTPGKPATSLPGDSLPPVSDHGFASQRGRMSLPVRGSIIESYGKHKHPEF
HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCC
NSYTFSKGLSIAAGAGSEIRCIYDGTVVFADYFKGYGNMVIVDHGGGYFSLYAHASRILK
CCEEHHCCCEEEECCCCCEEEEECCHHHHHHHHHCCCCEEEEECCCCEEHHHHHHHHHHH
RVGAQIARNDAVATVGDVDSSRGPLLYFEIRHQGRPLDPAGWVR
HHHHHHHHCCCEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]