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The map label for this gene is ctpA [H]

Identifier: 118580823

GI number: 118580823

Start: 2607866

End: 2609224

Strand: Reverse

Name: ctpA [H]

Synonym: Ppro_2409

Alternate gene names: 118580823

Gene position: 2609224-2607866 (Counterclockwise)

Preceding gene: 118580824

Following gene: 118580822

Centisome position: 65.1

GC content: 57.84

Gene sequence:

>1359_bases
ATGGTCAGCATGGGCAGTAAAAAAAGACGGGTTTTTGCGGGGTTGGTCATTGCCATGGCCACATTGGTGATTTTTATCGG
TATCAGCTCCCAGCCCCGTTCCAGGGCAGAGGCACAGGGGAGCGATTACGAATCCATCGAGTTGTTCACCGATGTCATGG
CCATCATCAAGAAGAGTTATGTGGAGGAGGTGGACACCAAGAAGCTTATCTACGGCGCCATCAACGGCATGCTGGCATCC
CTTGATCCCCACAGCTCCTTCATGTCTCCCGAAACCTACAAGGAGATGAAGATCGATACCAAGGGTGCCTTCGGCGGTCT
GGGGATCGAGATTACCGTCAAGGATGGTGTCCTGATTGTCATCGCGCCCATCGAGGACACGCCCGCCTTCAAGGCCGGCA
TCAAGGCCGGTGACCACATCTTCAAGATCGATGGCAAGTTCACCAAGGACATGAATATCAACGATGCGGTCAAGCGCATG
CGCGGCCCCAAGGGAACCAAGGTGGTGCTGAGCATCATGCGCGAGGGATTCGACAAGCCCAAGGACTTCACCCTGACCCG
CGACATCATCCAGGTCAAGAGTGTCCGCTACCGCATGCTGGAAGACGGTTTCGGGTATGTGCGCATCGCCCAGTTCCAGG
AGAAGACCGACGATGACCTGGTCAAGGCGCTCAAGGCGCTGGAGGACGAGGCAAAGAAACCGCTCTCCGGGTTGGTGCTC
GACCTGCGCAACGACCCGGGCGGACTGCTGGACCAGGCGGTCAGGGTGGCCGACCACTTCGTCAGCGAGGGCTTGATCGT
CTACACCGAGGGGCGTGAGAAAGACGCCAAGATGCAGTTTTCGGCCAGAAAGGGGGCCAAGGAGCCCAACTACCCCATCG
TTATCCTGATCAACGGCGGCAGCGCCAGCGCCTCCGAGATCGTGGCCGGCGCACTGCAGGACCACAAGCGCGCCATCATC
ATGGGAACCCAGAGTTTCGGCAAGGGATCGGTGCAGACCATCATCCCGCTTGCCGATGAATCCGGCCTGCGCCTGACGAC
CGCCCGCTACTTCACCCCCAATGGCCGCTCGATCCAGGCCAAGGGGATCACCCCGGATATCGTGGTGGAGCGCCTGGAAT
TGCCCCGTCAGAGCGACAAGAAGGAAGGTTTCAATATCCGTGAGAGGGATCTGGAGAACCACTTCCAGAACGGCGATGAG
TCTGAGGGATCCACGGTAACCGACAAGAAGGATGACCGGAAGGATAAACAGCTTTCCACCAAACCCGAGGACAACCTGAA
GAACGATTACCAGGTCATGCGAGCACTGGATCTGCTCAAAGGGTGGGAGATCTTCAAGAAGATCGGCTCTTCCAAGTAG

Upstream 100 bases:

>100_bases
TCAAGGAAGACCACTTGACCCGGCCGGCTGGGTAAGATAATCTCGATAGTTCGCGATCAGATCAGATAAACAGCATAGTT
CATACAAGCGGAGGCGGAGG

Downstream 100 bases:

>100_bases
TGTCGAGGAGCGTCGCCCAGCGTGTCTAAAATCAGACCAAACCGTAAGAACCAGAGCCGGGGCGGCGGCCCAACCTATGC
CGCCCTGGCCATCCTGGCCG

Product: carboxyl-terminal protease

Products: NA

Alternate protein names: C-terminal-processing protease [H]

Number of amino acids: Translated: 452; Mature: 452

Protein sequence:

>452_residues
MVSMGSKKRRVFAGLVIAMATLVIFIGISSQPRSRAEAQGSDYESIELFTDVMAIIKKSYVEEVDTKKLIYGAINGMLAS
LDPHSSFMSPETYKEMKIDTKGAFGGLGIEITVKDGVLIVIAPIEDTPAFKAGIKAGDHIFKIDGKFTKDMNINDAVKRM
RGPKGTKVVLSIMREGFDKPKDFTLTRDIIQVKSVRYRMLEDGFGYVRIAQFQEKTDDDLVKALKALEDEAKKPLSGLVL
DLRNDPGGLLDQAVRVADHFVSEGLIVYTEGREKDAKMQFSARKGAKEPNYPIVILINGGSASASEIVAGALQDHKRAII
MGTQSFGKGSVQTIIPLADESGLRLTTARYFTPNGRSIQAKGITPDIVVERLELPRQSDKKEGFNIRERDLENHFQNGDE
SEGSTVTDKKDDRKDKQLSTKPEDNLKNDYQVMRALDLLKGWEIFKKIGSSK

Sequences:

>Translated_452_residues
MVSMGSKKRRVFAGLVIAMATLVIFIGISSQPRSRAEAQGSDYESIELFTDVMAIIKKSYVEEVDTKKLIYGAINGMLAS
LDPHSSFMSPETYKEMKIDTKGAFGGLGIEITVKDGVLIVIAPIEDTPAFKAGIKAGDHIFKIDGKFTKDMNINDAVKRM
RGPKGTKVVLSIMREGFDKPKDFTLTRDIIQVKSVRYRMLEDGFGYVRIAQFQEKTDDDLVKALKALEDEAKKPLSGLVL
DLRNDPGGLLDQAVRVADHFVSEGLIVYTEGREKDAKMQFSARKGAKEPNYPIVILINGGSASASEIVAGALQDHKRAII
MGTQSFGKGSVQTIIPLADESGLRLTTARYFTPNGRSIQAKGITPDIVVERLELPRQSDKKEGFNIRERDLENHFQNGDE
SEGSTVTDKKDDRKDKQLSTKPEDNLKNDYQVMRALDLLKGWEIFKKIGSSK
>Mature_452_residues
MVSMGSKKRRVFAGLVIAMATLVIFIGISSQPRSRAEAQGSDYESIELFTDVMAIIKKSYVEEVDTKKLIYGAINGMLAS
LDPHSSFMSPETYKEMKIDTKGAFGGLGIEITVKDGVLIVIAPIEDTPAFKAGIKAGDHIFKIDGKFTKDMNINDAVKRM
RGPKGTKVVLSIMREGFDKPKDFTLTRDIIQVKSVRYRMLEDGFGYVRIAQFQEKTDDDLVKALKALEDEAKKPLSGLVL
DLRNDPGGLLDQAVRVADHFVSEGLIVYTEGREKDAKMQFSARKGAKEPNYPIVILINGGSASASEIVAGALQDHKRAII
MGTQSFGKGSVQTIIPLADESGLRLTTARYFTPNGRSIQAKGITPDIVVERLELPRQSDKKEGFNIRERDLENHFQNGDE
SEGSTVTDKKDDRKDKQLSTKPEDNLKNDYQVMRALDLLKGWEIFKKIGSSK

Specific function: Involved in protection of the bacterium from thermal and osmotic stresses (Potential) [H]

COG id: COG0793

COG function: function code M; Periplasmic protease

Gene ontology:

Cell location: Secreted (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PDZ (DHR) domain [H]

Homologues:

Organism=Escherichia coli, GI1788134, Length=323, Percent_Identity=30.3405572755418, Blast_Score=128, Evalue=6e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478
- InterPro:   IPR005151
- InterPro:   IPR004447 [H]

Pfam domain/function: PF00595 PDZ; PF03572 Peptidase_S41 [H]

EC number: =3.4.21.102 [H]

Molecular weight: Translated: 50034; Mature: 50034

Theoretical pI: Translated: 9.36; Mature: 9.36

Prosite motif: PS50106 PDZ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSMGSKKRRVFAGLVIAMATLVIFIGISSQPRSRAEAQGSDYESIELFTDVMAIIKKSY
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHH
VEEVDTKKLIYGAINGMLASLDPHSSFMSPETYKEMKIDTKGAFGGLGIEITVKDGVLIV
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHEEECCCCCCCCEEEEEEECCEEEE
IAPIEDTPAFKAGIKAGDHIFKIDGKFTKDMNINDAVKRMRGPKGTKVVLSIMREGFDKP
EECCCCCCCHHHCCCCCCEEEEECCCEECCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCC
KDFTLTRDIIQVKSVRYRMLEDGFGYVRIAQFQEKTDDDLVKALKALEDEAKKPLSGLVL
CCCHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHCCCHHHHHHHHHHHHHHHCCCCCCEEE
DLRNDPGGLLDQAVRVADHFVSEGLIVYTEGREKDAKMQFSARKGAKEPNYPIVILINGG
EECCCCCHHHHHHHHHHHHHHHCCEEEEECCCCCCCCEEEHHHCCCCCCCCCEEEEEECC
SASASEIVAGALQDHKRAIIMGTQSFGKGSVQTIIPLADESGLRLTTARYFTPNGRSIQA
CCCHHHHHHHHHHHCCEEEEEECCCCCCCCCEEEEEECCCCCCEEEEEEEECCCCCEEEE
KGITPDIVVERLELPRQSDKKEGFNIRERDLENHFQNGDESEGSTVTDKKDDRKDKQLST
CCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCC
KPEDNLKNDYQVMRALDLLKGWEIFKKIGSSK
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MVSMGSKKRRVFAGLVIAMATLVIFIGISSQPRSRAEAQGSDYESIELFTDVMAIIKKSY
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHH
VEEVDTKKLIYGAINGMLASLDPHSSFMSPETYKEMKIDTKGAFGGLGIEITVKDGVLIV
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHEEECCCCCCCCEEEEEEECCEEEE
IAPIEDTPAFKAGIKAGDHIFKIDGKFTKDMNINDAVKRMRGPKGTKVVLSIMREGFDKP
EECCCCCCCHHHCCCCCCEEEEECCCEECCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCC
KDFTLTRDIIQVKSVRYRMLEDGFGYVRIAQFQEKTDDDLVKALKALEDEAKKPLSGLVL
CCCHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHCCCHHHHHHHHHHHHHHHCCCCCCEEE
DLRNDPGGLLDQAVRVADHFVSEGLIVYTEGREKDAKMQFSARKGAKEPNYPIVILINGG
EECCCCCHHHHHHHHHHHHHHHCCEEEEECCCCCCCCEEEHHHCCCCCCCCCEEEEEECC
SASASEIVAGALQDHKRAIIMGTQSFGKGSVQTIIPLADESGLRLTTARYFTPNGRSIQA
CCCHHHHHHHHHHHCCEEEEEECCCCCCCCCEEEEEECCCCCCEEEEEEEECCCCCEEEE
KGITPDIVVERLELPRQSDKKEGFNIRERDLENHFQNGDESEGSTVTDKKDDRKDKQLST
CCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCC
KPEDNLKNDYQVMRALDLLKGWEIFKKIGSSK
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9141685 [H]