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The map label for this gene is ygbT [H]

Identifier: 118580752

GI number: 118580752

Start: 2523418

End: 2524341

Strand: Reverse

Name: ygbT [H]

Synonym: Ppro_2337

Alternate gene names: 118580752

Gene position: 2524341-2523418 (Counterclockwise)

Preceding gene: 118580753

Following gene: 118580751

Centisome position: 62.98

GC content: 62.66

Gene sequence:

>924_bases
ATGGCCGAACCAATTCTTCCTCCCCTGAAACCGCTCCCCATCAAGGACCGCATCTCGGTGATCTATGTGGAGCGTGGCAA
CCTGGATATCCTTGACGGGGCGTTCGTGGTGGTGGATGCCACCGGCGTGCGTACCCACATACCCATCGCTACGGTGGCCT
GCCTGATGCTGGAACCGGGGGCGCGGGTGTCACATGCGGCCGTTGTGCTGGCGGCGCGGGTAGGGTGCCTGCTGGTCTGG
ATCGGAGAGGCCGGGGTGCGGTTGTACGCGGCGGGACAACCGGGAGGGGCTCGTTCCGATCGGTTACTGTACCAGGCCAA
GCTGGCTCTGGACGATACGGCCCGGCTCAAGGTGGTGCGCAAGATGTACGCCCTGCGCTTCAAGGAGGAACCGCCTGAAC
GGCGCAGCGTGGAACAGTTGCGCGGAATCGAAGGGGTGCGGGTGCGCAAGATGTACGAACTGCTGGCCCGCCAGTACGGT
GTGGAGTGGAAAAACCGTAATTATGATCATAGCGAATGGGGGAGCGGCGACCTGCCCAACCGCTGTCTCTCGTCGGCCAC
CGCCTGTATTTACGGTATCTGTGAGGCCGCCATTCTGGCGGCGGGGTATGCGCCTGCCGTGGGGTTCATTCACACCGGCA
AGCCGCAGTCTTTTGTCTACGATATCGCCGATATCTTCAAGTTCGAGACGGTGGTGCCGGTGGCTTTCCGTGTTGCCGCC
AAAAAGCCGCGCAACCCGGAGCGGGAGGTGCGGCTGGCTTGCCGGGATTCGTTCCGCCAGACCAAACTTTTGCAGCGGAT
TATCCCCACCATTGAGCAGGTGCTGGCCGCTGGTGAAATGGAGCTGCCCAAGGCGCACGAGGAGGCGGTTGCGCCGGCCA
TACCCAACAAGGAGGGGATCGGGGATGCTGGTCATCGTGGTTGA

Upstream 100 bases:

>100_bases
ACGCACTTTTCGAACAAAAACCGGGCACTCACATGGAAACAAAAACCGGGCACCCACATGGGGGTACCCCTACGTATTTT
ATGTATTCGGAGACGAGAAC

Downstream 100 bases:

>100_bases
GAACGTACCGCCCCGCCTGAGGGGACGGCTGGGGCTGTGGCTGGTGGAGGTGCGTGCCGGTGTGTATGTGGGCAAGGTCT
CGCGTCGGGTACGGGAGATG

Product: CRISPR-associated Cas1 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 307; Mature: 306

Protein sequence:

>307_residues
MAEPILPPLKPLPIKDRISVIYVERGNLDILDGAFVVVDATGVRTHIPIATVACLMLEPGARVSHAAVVLAARVGCLLVW
IGEAGVRLYAAGQPGGARSDRLLYQAKLALDDTARLKVVRKMYALRFKEEPPERRSVEQLRGIEGVRVRKMYELLARQYG
VEWKNRNYDHSEWGSGDLPNRCLSSATACIYGICEAAILAAGYAPAVGFIHTGKPQSFVYDIADIFKFETVVPVAFRVAA
KKPRNPEREVRLACRDSFRQTKLLQRIIPTIEQVLAAGEMELPKAHEEAVAPAIPNKEGIGDAGHRG

Sequences:

>Translated_307_residues
MAEPILPPLKPLPIKDRISVIYVERGNLDILDGAFVVVDATGVRTHIPIATVACLMLEPGARVSHAAVVLAARVGCLLVW
IGEAGVRLYAAGQPGGARSDRLLYQAKLALDDTARLKVVRKMYALRFKEEPPERRSVEQLRGIEGVRVRKMYELLARQYG
VEWKNRNYDHSEWGSGDLPNRCLSSATACIYGICEAAILAAGYAPAVGFIHTGKPQSFVYDIADIFKFETVVPVAFRVAA
KKPRNPEREVRLACRDSFRQTKLLQRIIPTIEQVLAAGEMELPKAHEEAVAPAIPNKEGIGDAGHRG
>Mature_306_residues
AEPILPPLKPLPIKDRISVIYVERGNLDILDGAFVVVDATGVRTHIPIATVACLMLEPGARVSHAAVVLAARVGCLLVWI
GEAGVRLYAAGQPGGARSDRLLYQAKLALDDTARLKVVRKMYALRFKEEPPERRSVEQLRGIEGVRVRKMYELLARQYGV
EWKNRNYDHSEWGSGDLPNRCLSSATACIYGICEAAILAAGYAPAVGFIHTGKPQSFVYDIADIFKFETVVPVAFRVAAK
KPRNPEREVRLACRDSFRQTKLLQRIIPTIEQVLAAGEMELPKAHEEAVAPAIPNKEGIGDAGHRG

Specific function: Unknown

COG id: COG1518

COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789113, Length=299, Percent_Identity=66.8896321070234, Blast_Score=425, Evalue=1e-120,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002729
- InterPro:   IPR019851 [H]

Pfam domain/function: PF01867 DUF48 [H]

EC number: NA

Molecular weight: Translated: 33742; Mature: 33610

Theoretical pI: Translated: 9.15; Mature: 9.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEPILPPLKPLPIKDRISVIYVERGNLDILDGAFVVVDATGVRTHIPIATVACLMLEPG
CCCCCCCCCCCCCCCCCEEEEEEECCCEEEECCCEEEEECCCCCCCCHHHHHHHHHCCCC
ARVSHAAVVLAARVGCLLVWIGEAGVRLYAAGQPGGARSDRLLYQAKLALDDTARLKVVR
CCHHHHHHHHHHHHHEEEEEECCCCEEEEECCCCCCCCCCCEEEEEHHHCCHHHHHHHHH
KMYALRFKEEPPERRSVEQLRGIEGVRVRKMYELLARQYGVEWKNRNYDHSEWGSGDLPN
HHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCH
RCLSSATACIYGICEAAILAAGYAPAVGFIHTGKPQSFVYDIADIFKFETVVPVAFRVAA
HHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH
KKPRNPEREVRLACRDSFRQTKLLQRIIPTIEQVLAAGEMELPKAHEEAVAPAIPNKEGI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCC
GDAGHRG
CCCCCCC
>Mature Secondary Structure 
AEPILPPLKPLPIKDRISVIYVERGNLDILDGAFVVVDATGVRTHIPIATVACLMLEPG
CCCCCCCCCCCCCCCCEEEEEEECCCEEEECCCEEEEECCCCCCCCHHHHHHHHHCCCC
ARVSHAAVVLAARVGCLLVWIGEAGVRLYAAGQPGGARSDRLLYQAKLALDDTARLKVVR
CCHHHHHHHHHHHHHEEEEEECCCCEEEEECCCCCCCCCCCEEEEEHHHCCHHHHHHHHH
KMYALRFKEEPPERRSVEQLRGIEGVRVRKMYELLARQYGVEWKNRNYDHSEWGSGDLPN
HHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCH
RCLSSATACIYGICEAAILAAGYAPAVGFIHTGKPQSFVYDIADIFKFETVVPVAFRVAA
HHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH
KKPRNPEREVRLACRDSFRQTKLLQRIIPTIEQVLAAGEMELPKAHEEAVAPAIPNKEGI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCCCC
GDAGHRG
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]