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The map label for this gene is ygbF [H]

Identifier: 118580751

GI number: 118580751

Start: 2523141

End: 2523437

Strand: Reverse

Name: ygbF [H]

Synonym: Ppro_2336

Alternate gene names: 118580751

Gene position: 2523437-2523141 (Counterclockwise)

Preceding gene: 118580752

Following gene: 118580750

Centisome position: 62.96

GC content: 61.62

Gene sequence:

>297_bases
ATGCTGGTCATCGTGGTTGAGAACGTACCGCCCCGCCTGAGGGGACGGCTGGGGCTGTGGCTGGTGGAGGTGCGTGCCGG
TGTGTATGTGGGCAAGGTCTCGCGTCGGGTACGGGAGATGATCCGGGACAACCTGGAGCAGGGGGTAGATGAAGGAAGCG
CAGTCATGGCATGGAGCAGCAACACCGAGTCGGGGTTTGATTTCCTGACCATGGGCGCCAACCGACGGATTCCGGTTGAG
ATGGACGGCATCAAGCTGGTATCGTTTCTGCCGGAGGATGCGGCAACGACCTCGTAG

Upstream 100 bases:

>100_bases
CCCACCATTGAGCAGGTGCTGGCCGCTGGTGAAATGGAGCTGCCCAAGGCGCACGAGGAGGCGGTTGCGCCGGCCATACC
CAACAAGGAGGGGATCGGGG

Downstream 100 bases:

>100_bases
GGGCGGCCCCATGTGGCCGCCCTATGTTGTTGCCCCATGTGTCCGCCCTGTCTTTTCGTGTCATCGCGGATATACAAAAC
CGGGCACCCACACGGAAACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 98; Mature: 98

Protein sequence:

>98_residues
MLVIVVENVPPRLRGRLGLWLVEVRAGVYVGKVSRRVREMIRDNLEQGVDEGSAVMAWSSNTESGFDFLTMGANRRIPVE
MDGIKLVSFLPEDAATTS

Sequences:

>Translated_98_residues
MLVIVVENVPPRLRGRLGLWLVEVRAGVYVGKVSRRVREMIRDNLEQGVDEGSAVMAWSSNTESGFDFLTMGANRRIPVE
MDGIKLVSFLPEDAATTS
>Mature_98_residues
MLVIVVENVPPRLRGRLGLWLVEVRAGVYVGKVSRRVREMIRDNLEQGVDEGSAVMAWSSNTESGFDFLTMGANRRIPVE
MDGIKLVSFLPEDAATTS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082153, Length=91, Percent_Identity=64.8351648351648, Blast_Score=129, Evalue=3e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010152 [H]

Pfam domain/function: PF09707 Cas_Cas2CT1978 [H]

EC number: NA

Molecular weight: Translated: 10864; Mature: 10864

Theoretical pI: Translated: 5.13; Mature: 5.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVIVVENVPPRLRGRLGLWLVEVRAGVYVGKVSRRVREMIRDNLEQGVDEGSAVMAWSS
CEEEEECCCCHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECC
NTESGFDFLTMGANRRIPVEMDGIKLVSFLPEDAATTS
CCCCCCEEEEECCCCCCCEEECCEEEEEECCCCCCCCC
>Mature Secondary Structure
MLVIVVENVPPRLRGRLGLWLVEVRAGVYVGKVSRRVREMIRDNLEQGVDEGSAVMAWSS
CEEEEECCCCHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECC
NTESGFDFLTMGANRRIPVEMDGIKLVSFLPEDAATTS
CCCCCCEEEEECCCCCCCEEECCEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2656660; 9278503; 7567469 [H]