| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
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The map label for this gene is 118580696
Identifier: 118580696
GI number: 118580696
Start: 2455878
End: 2457719
Strand: Reverse
Name: 118580696
Synonym: Ppro_2281
Alternate gene names: NA
Gene position: 2457719-2455878 (Counterclockwise)
Preceding gene: 118580697
Following gene: 118580695
Centisome position: 61.32
GC content: 42.29
Gene sequence:
>1842_bases ATGAGTGCAGAATTTACGACTTCTTTTTTGACATATTATATTCGGAGCCTTGGAGAAAGGACTCGTGAAGAAAAATCGTC AACCAAATTCGGTTTTGACTGGATAATCTATAATCTTGCACTCGCAGATGAATTAATTCCATATCGATTGCCGTTTATCC GTGGCGGCCCAGACGAAATCTCGAAAACTAAAACTGAACCAGAATTTGGCGTTGACCTTTCATTTATTTCCCCAGACAAA AAGGTATTGTACATTTTTGTCTTGAAAGATGAGGTTTTGAAGGGTTCTACGTGGAATTCAAATAACTTCGATTATGACTT GCGCAATGCTGCAAGCCCAAATCTCGAAGCTCCAGAGTTTCTAGAGATACAAGCGGTCCGTATCATCCTGGCCTACAATA AAGACGAGGACCAAACAGGCATCCAATATTTTGAAAATCTTACTAAAAATTTGGGGCCAACAATCCGGGGGACTATTCCT CTATCGTTTGAAAGATGGAATCTCACGACTATTACCGAAAAGGTTAAAGACAAACTATTAACCCCATCCTTGCTGCCACA AAGATTCTTCAGTTTATTCAGCTACATATCATCACAATTTGCCGATTTCAGACACGGTTCTGATGCCTGGACGCAACAAT TAATACCGAATTGGAATCGTTTTTTGAGCGATTTGCTCACGGGTAATGTTGGAGAGCGAAATGTTCGGCTGTTACCGGTT GCCTTGATAATTCTTAGAGAGCAAGGAAATATAAATCCAAGTTCTGGAACCGGGTGGTTAGACCTTGCAGAATGGGCGAT GCTGGCAATTTGGGAAGTTTTTCGCACTGCCGACAAAAATGGAGTGAAACAAGCCATATTAGAGATTTGGTTCGGTATGT ACCTGCCAGAGTTGCATCAATATTATCGTGCTCATGCTAAAGAGCTTGCGACCGAGCACAGCCTTGAATCAAGAGGTTCA GGAACATACCTTGATTCAGTTGCTTCTGCCATTGTTGCACAATGGCATGTAGCCCGATTGGGTATTTTGGCAGTTGGTCT TGCGGAATTTGGAACTGACCCGCCTGAAGAAGAGCAAAAAGCTCAATTGAAAATGCTTAACGAAATAGCTGATTGGTTGA TTGGTTTCATGAACGCGAATCCTTCAACTATGAGGCCAATACTTGACATTAATCATATTGAGCAATTTCTTATCTGGCGG ACACTTTGGCAGGTAGGGAGAATTGAAGATATTTATAAATGGCTGTTTAACCTGCAACGCAATCTTCTCGTCAGACGGTC AAAAACTGCATGGTTACCATTTATCGAAGGAGGGAATTCTCTCGAAACGGTTTTTGAGTATCTGGCTACAAACGAAAAGC CTCCCGAGTTTACGGACCAAAGCTCGCTATTACTGCTCTGCCTGTTAGAAATAGCCTTCTGCCTTGACCCTGAAAAACGC GAAAAGCTCATTGCCCTTTATTACAAACAGATAATACTTGCCCAAGATTCATCCGGCAATCAACTAAAGAATTGTGAGCC GATAGACCTGATGGGGTGGGCGCCTCCAGAAGACTGGGCATCACGGATTCTCATCAAAAGTCTTTCTTATGAGGGAGAAT GTCAGGCTCTATCTGTTTTCAATATTCAGGGTGATTTGGACAGTAAGAGAATTGTGGAAAATATAGAACAATTCGTTCGG CAATCGCGAGAAGCTCAGAAATTTGAGTTCCCAGAATGGCTTCCTGCTTCTGTTCTTGTTTTAGCCTGTCTGAAACATCA AACTCCCTTGCCACCCGAAATCTGGCGGTTACCAATATGGGGAGTGATAGATTCAGAATCATGCAAAGGAGAACAAAAGT GA
Upstream 100 bases:
>100_bases GTATTGAACTAATTGACCCTGAAGGCATGGCATTCCGTCGCCTACATGCTTCAGCCCAAATTGACGCACTGTCGAAAGGT ATCGTCTTGGAGGAAGAAGC
Downstream 100 bases:
>100_bases CCAAAGCAGACATAGTTGAGCGGATTTATGAAAAGACCGGCTTTGCCAAGAAGGATTGCGCCGATTTGTTGGAAACGGTC TTCGATATTATGAAGGCAAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 613; Mature: 612
Protein sequence:
>613_residues MSAEFTTSFLTYYIRSLGERTREEKSSTKFGFDWIIYNLALADELIPYRLPFIRGGPDEISKTKTEPEFGVDLSFISPDK KVLYIFVLKDEVLKGSTWNSNNFDYDLRNAASPNLEAPEFLEIQAVRIILAYNKDEDQTGIQYFENLTKNLGPTIRGTIP LSFERWNLTTITEKVKDKLLTPSLLPQRFFSLFSYISSQFADFRHGSDAWTQQLIPNWNRFLSDLLTGNVGERNVRLLPV ALIILREQGNINPSSGTGWLDLAEWAMLAIWEVFRTADKNGVKQAILEIWFGMYLPELHQYYRAHAKELATEHSLESRGS GTYLDSVASAIVAQWHVARLGILAVGLAEFGTDPPEEEQKAQLKMLNEIADWLIGFMNANPSTMRPILDINHIEQFLIWR TLWQVGRIEDIYKWLFNLQRNLLVRRSKTAWLPFIEGGNSLETVFEYLATNEKPPEFTDQSSLLLLCLLEIAFCLDPEKR EKLIALYYKQIILAQDSSGNQLKNCEPIDLMGWAPPEDWASRILIKSLSYEGECQALSVFNIQGDLDSKRIVENIEQFVR QSREAQKFEFPEWLPASVLVLACLKHQTPLPPEIWRLPIWGVIDSESCKGEQK
Sequences:
>Translated_613_residues MSAEFTTSFLTYYIRSLGERTREEKSSTKFGFDWIIYNLALADELIPYRLPFIRGGPDEISKTKTEPEFGVDLSFISPDK KVLYIFVLKDEVLKGSTWNSNNFDYDLRNAASPNLEAPEFLEIQAVRIILAYNKDEDQTGIQYFENLTKNLGPTIRGTIP LSFERWNLTTITEKVKDKLLTPSLLPQRFFSLFSYISSQFADFRHGSDAWTQQLIPNWNRFLSDLLTGNVGERNVRLLPV ALIILREQGNINPSSGTGWLDLAEWAMLAIWEVFRTADKNGVKQAILEIWFGMYLPELHQYYRAHAKELATEHSLESRGS GTYLDSVASAIVAQWHVARLGILAVGLAEFGTDPPEEEQKAQLKMLNEIADWLIGFMNANPSTMRPILDINHIEQFLIWR TLWQVGRIEDIYKWLFNLQRNLLVRRSKTAWLPFIEGGNSLETVFEYLATNEKPPEFTDQSSLLLLCLLEIAFCLDPEKR EKLIALYYKQIILAQDSSGNQLKNCEPIDLMGWAPPEDWASRILIKSLSYEGECQALSVFNIQGDLDSKRIVENIEQFVR QSREAQKFEFPEWLPASVLVLACLKHQTPLPPEIWRLPIWGVIDSESCKGEQK >Mature_612_residues SAEFTTSFLTYYIRSLGERTREEKSSTKFGFDWIIYNLALADELIPYRLPFIRGGPDEISKTKTEPEFGVDLSFISPDKK VLYIFVLKDEVLKGSTWNSNNFDYDLRNAASPNLEAPEFLEIQAVRIILAYNKDEDQTGIQYFENLTKNLGPTIRGTIPL SFERWNLTTITEKVKDKLLTPSLLPQRFFSLFSYISSQFADFRHGSDAWTQQLIPNWNRFLSDLLTGNVGERNVRLLPVA LIILREQGNINPSSGTGWLDLAEWAMLAIWEVFRTADKNGVKQAILEIWFGMYLPELHQYYRAHAKELATEHSLESRGSG TYLDSVASAIVAQWHVARLGILAVGLAEFGTDPPEEEQKAQLKMLNEIADWLIGFMNANPSTMRPILDINHIEQFLIWRT LWQVGRIEDIYKWLFNLQRNLLVRRSKTAWLPFIEGGNSLETVFEYLATNEKPPEFTDQSSLLLLCLLEIAFCLDPEKRE KLIALYYKQIILAQDSSGNQLKNCEPIDLMGWAPPEDWASRILIKSLSYEGECQALSVFNIQGDLDSKRIVENIEQFVRQ SREAQKFEFPEWLPASVLVLACLKHQTPLPPEIWRLPIWGVIDSESCKGEQK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 70442; Mature: 70311
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAEFTTSFLTYYIRSLGERTREEKSSTKFGFDWIIYNLALADELIPYRLPFIRGGPDEI CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHH SKTKTEPEFGVDLSFISPDKKVLYIFVLKDEVLKGSTWNSNNFDYDLRNAASPNLEAPEF HHCCCCCCCCCEEEEECCCCEEEEEEEEECHHHCCCCCCCCCCCCCCCCCCCCCCCCCCH LEIQAVRIILAYNKDEDQTGIQYFENLTKNLGPTIRGTIPLSFERWNLTTITEKVKDKLL HHHEEEEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEEEEECCCHHHHHHHHHHHHC TPSLLPQRFFSLFSYISSQFADFRHGSDAWTQQLIPNWNRFLSDLLTGNVGERNVRLLPV CHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCEEEEEE ALIILREQGNINPSSGTGWLDLAEWAMLAIWEVFRTADKNGVKQAILEIWFGMYLPELHQ HEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH YYRAHAKELATEHSLESRGSGTYLDSVASAIVAQWHVARLGILAVGLAEFGTDPPEEEQK HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH AQLKMLNEIADWLIGFMNANPSTMRPILDINHIEQFLIWRTLWQVGRIEDIYKWLFNLQR HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH NLLVRRSKTAWLPFIEGGNSLETVFEYLATNEKPPEFTDQSSLLLLCLLEIAFCLDPEKR HHHHHCCCCCCCCEECCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHH EKLIALYYKQIILAQDSSGNQLKNCEPIDLMGWAPPEDWASRILIKSLSYEGECQALSVF HHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEE NIQGDLDSKRIVENIEQFVRQSREAQKFEFPEWLPASVLVLACLKHQTPLPPEIWRLPIW EECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCHHHHCCCCC GVIDSESCKGEQK EEECCCCCCCCCC >Mature Secondary Structure SAEFTTSFLTYYIRSLGERTREEKSSTKFGFDWIIYNLALADELIPYRLPFIRGGPDEI CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHH SKTKTEPEFGVDLSFISPDKKVLYIFVLKDEVLKGSTWNSNNFDYDLRNAASPNLEAPEF HHCCCCCCCCCEEEEECCCCEEEEEEEEECHHHCCCCCCCCCCCCCCCCCCCCCCCCCCH LEIQAVRIILAYNKDEDQTGIQYFENLTKNLGPTIRGTIPLSFERWNLTTITEKVKDKLL HHHEEEEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEEEEEECCCHHHHHHHHHHHHC TPSLLPQRFFSLFSYISSQFADFRHGSDAWTQQLIPNWNRFLSDLLTGNVGERNVRLLPV CHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCEEEEEE ALIILREQGNINPSSGTGWLDLAEWAMLAIWEVFRTADKNGVKQAILEIWFGMYLPELHQ HEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH YYRAHAKELATEHSLESRGSGTYLDSVASAIVAQWHVARLGILAVGLAEFGTDPPEEEQK HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH AQLKMLNEIADWLIGFMNANPSTMRPILDINHIEQFLIWRTLWQVGRIEDIYKWLFNLQR HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH NLLVRRSKTAWLPFIEGGNSLETVFEYLATNEKPPEFTDQSSLLLLCLLEIAFCLDPEKR HHHHHCCCCCCCCEECCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHH EKLIALYYKQIILAQDSSGNQLKNCEPIDLMGWAPPEDWASRILIKSLSYEGECQALSVF HHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEE NIQGDLDSKRIVENIEQFVRQSREAQKFEFPEWLPASVLVLACLKHQTPLPPEIWRLPIW EECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCHHHHCCCCC GVIDSESCKGEQK EEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA