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The map label for this gene is ihfA [H]

Identifier: 118580695

GI number: 118580695

Start: 2455726

End: 2455899

Strand: Reverse

Name: ihfA [H]

Synonym: Ppro_2280

Alternate gene names: 118580695

Gene position: 2455899-2455726 (Counterclockwise)

Preceding gene: 118580696

Following gene: 118580694

Centisome position: 61.27

GC content: 45.4

Gene sequence:

>174_bases
ATGCAAAGGAGAACAAAAGTGACCAAAGCAGACATAGTTGAGCGGATTTATGAAAAGACCGGCTTTGCCAAGAAGGATTG
CGCCGATTTGTTGGAAACGGTCTTCGATATTATGAAGGCAACACTTGAGGCCGGTGAAAAACTCAAAATTGCTGGAAGGG
GGGTGGTTGGTTAG

Upstream 100 bases:

>100_bases
TTCCTGCTTCTGTTCTTGTTTTAGCCTGTCTGAAACATCAAACTCCCTTGCCACCCGAAATCTGGCGGTTACCAATATGG
GGAGTGATAGATTCAGAATC

Downstream 100 bases:

>100_bases
TTCCACCTGGTTAACTACTCCCAGCTATACTTCACATACAACCGGTCTGCTTCACCACCGGAACAACGGTCGGCATGGAC
CGGAATACGCACCAGGGCCT

Product: integration host factor subunit alpha

Products: NA

Alternate protein names: IHF-alpha [H]

Number of amino acids: Translated: 57; Mature: 57

Protein sequence:

>57_residues
MQRRTKVTKADIVERIYEKTGFAKKDCADLLETVFDIMKATLEAGEKLKIAGRGVVG

Sequences:

>Translated_57_residues
MQRRTKVTKADIVERIYEKTGFAKKDCADLLETVFDIMKATLEAGEKLKIAGRGVVG
>Mature_57_residues
MQRRTKVTKADIVERIYEKTGFAKKDCADLLETVFDIMKATLEAGEKLKIAGRGVVG

Specific function: This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control [H]

COG id: COG0776

COG function: function code L; Bacterial nucleoid DNA-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial histone-like protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000119
- InterPro:   IPR020816
- InterPro:   IPR010992
- InterPro:   IPR005684 [H]

Pfam domain/function: PF00216 Bac_DNA_binding [H]

EC number: NA

Molecular weight: Translated: 6344; Mature: 6344

Theoretical pI: Translated: 9.82; Mature: 9.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRRTKVTKADIVERIYEKTGFAKKDCADLLETVFDIMKATLEAGEKLKIAGRGVVG
CCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCC
>Mature Secondary Structure
MQRRTKVTKADIVERIYEKTGFAKKDCADLLETVFDIMKATLEAGEKLKIAGRGVVG
CCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA