Definition Pelobacter propionicus DSM 2379 chromosome, complete genome.
Accession NC_008609
Length 4,008,000

Click here to switch to the map view.

The map label for this gene is 118580591

Identifier: 118580591

GI number: 118580591

Start: 2348338

End: 2349051

Strand: Reverse

Name: 118580591

Synonym: Ppro_2175

Alternate gene names: NA

Gene position: 2349051-2348338 (Counterclockwise)

Preceding gene: 118580592

Following gene: 118580590

Centisome position: 58.61

GC content: 55.04

Gene sequence:

>714_bases
ATGAAGCGTCTGTTGACAATCCATACGGCTATTCTGGTCGTTACCCTCATCCTGGCAGTTGCCCGCGTTGATGCGGGGAC
GGTACTTGTGCCTGGCATGTCGGGTGGTGCTCTCATTGTCAGCAATGTAACGAGCCTGAAAGAGGCTCGTTACCGCTCGA
CCATCCACCAGAAATATGACTTCAGTTGCGGGTCCGCGGCATTGGCCACCCTGCTGACGCACCACTACGAAGACCGGGTC
AGCGAGCAGGAAGTCTTCAAATGGATGTATACCCACGGCGAGCAGGAAAAAATTCGTCGTGAAGGCTTTTCGCTGCTGGA
CATGAAATACTTCCTGGAAGCCCATGGCTACCTTGCCGATGGCTACAGGGTTGAGCTGGACAAACTGGCCCTGGCTGGTG
TGCCGGCCATCGTCCTGGTCAATATGAAGGGGTACCGGCATTTCGTGGTGGTGAAAGGGGTGACCGACAAGAGGGTGCTG
GTGGGTGATCCGGGACTGGGAACGAGGATCGTAGCGCGAAACGAGTTTGAAAAGATGTGGAACGGCCTGGTGTTTATCAT
CCGGAACAGGAGCGTCCGGTCTGAAAACAATTTCAATCGTCTGGAAGAATGGCGCTGCGTCAGGGAAAAGGCTCCACTCG
GTCTCGCCCTGAAAAACAGCGATCTGGCAAGCATAACCATGCTTTTGCCTGGTTCGGGAGGAGTACTGCCATGA

Upstream 100 bases:

>100_bases
GTGGATTTGCCACCGTTATCCAGAACTCGGGCAATCAGGTGCTCATCCAGAATGATCTGATCGTCAACGTAACCATGCAC
TGAATCGAGCGCACGATCCC

Downstream 100 bases:

>100_bases
CGACTCTACTGGGAAAACACATTAGAGGCGCGGTTTTTGTGATGGGGCTTATGGCCATGTCAGCCAACTGTCCCGCATAT
GCGGCCATGAATGATGCATT

Product: peptidase C39, bacteriocin processing

Products: NA

Alternate protein names: Double-Glycine Peptidase; C39 Family Peptidase; Periplasmic Protein; Bacteriocin Processing Protein Peptidase; Peptidase Protein; Cysteine Peptidase Family C; Periplasmic

Number of amino acids: Translated: 237; Mature: 237

Protein sequence:

>237_residues
MKRLLTIHTAILVVTLILAVARVDAGTVLVPGMSGGALIVSNVTSLKEARYRSTIHQKYDFSCGSAALATLLTHHYEDRV
SEQEVFKWMYTHGEQEKIRREGFSLLDMKYFLEAHGYLADGYRVELDKLALAGVPAIVLVNMKGYRHFVVVKGVTDKRVL
VGDPGLGTRIVARNEFEKMWNGLVFIIRNRSVRSENNFNRLEEWRCVREKAPLGLALKNSDLASITMLLPGSGGVLP

Sequences:

>Translated_237_residues
MKRLLTIHTAILVVTLILAVARVDAGTVLVPGMSGGALIVSNVTSLKEARYRSTIHQKYDFSCGSAALATLLTHHYEDRV
SEQEVFKWMYTHGEQEKIRREGFSLLDMKYFLEAHGYLADGYRVELDKLALAGVPAIVLVNMKGYRHFVVVKGVTDKRVL
VGDPGLGTRIVARNEFEKMWNGLVFIIRNRSVRSENNFNRLEEWRCVREKAPLGLALKNSDLASITMLLPGSGGVLP
>Mature_237_residues
MKRLLTIHTAILVVTLILAVARVDAGTVLVPGMSGGALIVSNVTSLKEARYRSTIHQKYDFSCGSAALATLLTHHYEDRV
SEQEVFKWMYTHGEQEKIRREGFSLLDMKYFLEAHGYLADGYRVELDKLALAGVPAIVLVNMKGYRHFVVVKGVTDKRVL
VGDPGLGTRIVARNEFEKMWNGLVFIIRNRSVRSENNFNRLEEWRCVREKAPLGLALKNSDLASITMLLPGSGGVLP

Specific function: Unknown

COG id: COG3271

COG function: function code R; Predicted double-glycine peptidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26472; Mature: 26472

Theoretical pI: Translated: 9.84; Mature: 9.84

Prosite motif: PS50990 PEPTIDASE_C39

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRLLTIHTAILVVTLILAVARVDAGTVLVPGMSGGALIVSNVTSLKEARYRSTIHQKYD
CCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCEEEEECHHHHHHHHHHHHHHHHCC
FSCGSAALATLLTHHYEDRVSEQEVFKWMYTHGEQEKIRREGFSLLDMKYFLEAHGYLAD
CCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHCCEECC
GYRVELDKLALAGVPAIVLVNMKGYRHFVVVKGVTDKRVLVGDPGLGTRIVARNEFEKMW
CEEEEHHHHHHCCCCEEEEEECCCCEEEEEEECCCCCEEEEECCCCCEEEEEHHHHHHHH
NGLVFIIRNRSVRSENNFNRLEEWRCVREKAPLGLALKNSDLASITMLLPGSGGVLP
CCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCEEEEEEECCCCCCCC
>Mature Secondary Structure
MKRLLTIHTAILVVTLILAVARVDAGTVLVPGMSGGALIVSNVTSLKEARYRSTIHQKYD
CCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCEEEEECHHHHHHHHHHHHHHHHCC
FSCGSAALATLLTHHYEDRVSEQEVFKWMYTHGEQEKIRREGFSLLDMKYFLEAHGYLAD
CCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHCCEECC
GYRVELDKLALAGVPAIVLVNMKGYRHFVVVKGVTDKRVLVGDPGLGTRIVARNEFEKMW
CEEEEHHHHHHCCCCEEEEEECCCCEEEEEEECCCCCEEEEECCCCCEEEEEHHHHHHHH
NGLVFIIRNRSVRSENNFNRLEEWRCVREKAPLGLALKNSDLASITMLLPGSGGVLP
CCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCEEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA