| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
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The map label for this gene is 118580522
Identifier: 118580522
GI number: 118580522
Start: 2265541
End: 2267238
Strand: Reverse
Name: 118580522
Synonym: Ppro_2106
Alternate gene names: NA
Gene position: 2267238-2265541 (Counterclockwise)
Preceding gene: 118580523
Following gene: 118580521
Centisome position: 56.57
GC content: 41.64
Gene sequence:
>1698_bases ATGAAATTTAAGCTCAAAGATTTTAATAATGATGCAAAATTCAATGTTTCCGCTCTACCCCAAAGAGATGCATTTCTTTA TTCTGATGGGGCGGATGTGGAGAAGAGAATTTATGAAGTATTGGTCCAAGCGACTGATCGGACCTGCTTTTCGAGAGAAT TGGCATCACAAATAATCGATTGGCCCAGTGAATATCATTTTTCTTCATTGCGTCATAATCTGCTTCGTCACGTTACATTT ACTTCTTCTGATAATGTACTGGAGTTAGGGTGTGGTTGTGGCGCCATTACAAGGCAATTAGGCGAAAGTGGCGCAAACGT AACAGCGGTGGAGGGTAATTTCGACAGGGCAAAGTGTGCTGCAGCACGTTGCGAAGATTTAAACAATGTAGAGGTGTTTT GTTCCAACTTTCAGGATATAGCTTTTCAAAAACAATATGACTATGTCACCATGATCGGAGTTTTTGAGTATTGCTCGATG TATTTCAAAGGTGATGATCCCGTCCCACAGTGCCTTGATATAGTAAAGTCCGCGCTTAAACCTGGCGGAAAACTCATTCT CGCAATAGAGAACCGGCTCGGACTCAAATATTTCGCGGGCATCGAAGAAGACCATGTGGGAATACCATATTACGGCATAC AAGATTTCTATAAGCCTAATACCGTGGCAACTTACGGAAAGGTTGAGCTCTCTAATCTCCTTTCAGATAACGGTTTTTGC TCCATTGAGTACCAATATCCATTTCCAGACTACAAGATTCCGAAAGTGGTCTTCATGGAAAGTGCTTTCAAAAACCCCCT ATTCAGGCCTGCCGAGATTATACGGCAGCTTAACTCTAGAGCTTATTCTAAAAAAACGACACACCAATTTTCTGAAAACC TGGTCTGGCCGGTTTTAGAAGCAAATAAGCTGATCCCGGATTTTTCCAATTCATTTCTTGTCTTTGCAGGTACTGAAAAT GAAAAGCCTGCAACTTCAAATATACTTGCAATCTATTATACCGTTGACAGGGCTGCAGAATATAATGTCAGGACCGAGTT TGTCGAAGACGGCGCTGAAAACATCCTTGTCAGAAAGGCTCCTATCATTGAAAAGCCTGGAGCGGACCAGGTTATTATTC ATCAGTGTATTGAGGACTGCTACTATCCTGGAAGGCACCTTGATGCTGAAATACGCAAGGTCATATACGAAGATGACTTG GACGGCTATATTAAAAAAATTCAGCAATGGATTGAGTTTGTCATCAGCGACGGTATTAAAAGCGCAAACAGTGAAGATAT TTACAGTTCCCTGCTATTGCCTGAATTTATCGACTGCATACCGATTAACCTGATCACATCACCCGAAGGCCTCGTCTATA TTGACAGAGAGTGGCGTTTTATGGCTGACTTTTCATTGACGACTCTGCTTTTGCGGTATCTCGACCGGGAAAGCAATGCT GCATTCATCAATAAGCACATAAGGGGGCAAGAACGCCCTTGTGGCAGATTGTTACACTATCTCGGGATTCCCTTTAATGA CAGGATTTATATGGATTACAGGAGAGTAAACGATATTATCTCGAAATTGGTTTACCTCGAAAAAGCTCCAGATTTTTCTC GTCAAGAAGACATTTCGGTTATGAAGAAAATTGATTCATATTTCCATCTGCTGATTCAAAAAATTAGCAACTGGTTTTGC TTGTCAGCGAGAGGGTAG
Upstream 100 bases:
>100_bases TAGTTCCACACGAGTGGGTAGTTAAAAAGATTGATGACGAAGCAAGTCGAGGCAAAGAGGTGGGCTGCGATTAGACCTCA TTGCGAAACAGCAGACGAAA
Downstream 100 bases:
>100_bases TTGCGTGTCAACAAAAGCGAGGCTGATAGCTTTTTACCTACCCCAATTTCATCCGATCCCAGAAAATAATGCATGGTGGG GAACCGGTTTCACCGAATGG
Product: type 12 methyltransferase
Products: NA
Alternate protein names: Glycosyl Transferase Group 2 Family Protein; SAM-Dependent Methyltransferase; Methyltransferase Domain Family; Glycosyl Transferase Family Protein; Glycosyl Transferase
Number of amino acids: Translated: 565; Mature: 565
Protein sequence:
>565_residues MKFKLKDFNNDAKFNVSALPQRDAFLYSDGADVEKRIYEVLVQATDRTCFSRELASQIIDWPSEYHFSSLRHNLLRHVTF TSSDNVLELGCGCGAITRQLGESGANVTAVEGNFDRAKCAAARCEDLNNVEVFCSNFQDIAFQKQYDYVTMIGVFEYCSM YFKGDDPVPQCLDIVKSALKPGGKLILAIENRLGLKYFAGIEEDHVGIPYYGIQDFYKPNTVATYGKVELSNLLSDNGFC SIEYQYPFPDYKIPKVVFMESAFKNPLFRPAEIIRQLNSRAYSKKTTHQFSENLVWPVLEANKLIPDFSNSFLVFAGTEN EKPATSNILAIYYTVDRAAEYNVRTEFVEDGAENILVRKAPIIEKPGADQVIIHQCIEDCYYPGRHLDAEIRKVIYEDDL DGYIKKIQQWIEFVISDGIKSANSEDIYSSLLLPEFIDCIPINLITSPEGLVYIDREWRFMADFSLTTLLLRYLDRESNA AFINKHIRGQERPCGRLLHYLGIPFNDRIYMDYRRVNDIISKLVYLEKAPDFSRQEDISVMKKIDSYFHLLIQKISNWFC LSARG
Sequences:
>Translated_565_residues MKFKLKDFNNDAKFNVSALPQRDAFLYSDGADVEKRIYEVLVQATDRTCFSRELASQIIDWPSEYHFSSLRHNLLRHVTF TSSDNVLELGCGCGAITRQLGESGANVTAVEGNFDRAKCAAARCEDLNNVEVFCSNFQDIAFQKQYDYVTMIGVFEYCSM YFKGDDPVPQCLDIVKSALKPGGKLILAIENRLGLKYFAGIEEDHVGIPYYGIQDFYKPNTVATYGKVELSNLLSDNGFC SIEYQYPFPDYKIPKVVFMESAFKNPLFRPAEIIRQLNSRAYSKKTTHQFSENLVWPVLEANKLIPDFSNSFLVFAGTEN EKPATSNILAIYYTVDRAAEYNVRTEFVEDGAENILVRKAPIIEKPGADQVIIHQCIEDCYYPGRHLDAEIRKVIYEDDL DGYIKKIQQWIEFVISDGIKSANSEDIYSSLLLPEFIDCIPINLITSPEGLVYIDREWRFMADFSLTTLLLRYLDRESNA AFINKHIRGQERPCGRLLHYLGIPFNDRIYMDYRRVNDIISKLVYLEKAPDFSRQEDISVMKKIDSYFHLLIQKISNWFC LSARG >Mature_565_residues MKFKLKDFNNDAKFNVSALPQRDAFLYSDGADVEKRIYEVLVQATDRTCFSRELASQIIDWPSEYHFSSLRHNLLRHVTF TSSDNVLELGCGCGAITRQLGESGANVTAVEGNFDRAKCAAARCEDLNNVEVFCSNFQDIAFQKQYDYVTMIGVFEYCSM YFKGDDPVPQCLDIVKSALKPGGKLILAIENRLGLKYFAGIEEDHVGIPYYGIQDFYKPNTVATYGKVELSNLLSDNGFC SIEYQYPFPDYKIPKVVFMESAFKNPLFRPAEIIRQLNSRAYSKKTTHQFSENLVWPVLEANKLIPDFSNSFLVFAGTEN EKPATSNILAIYYTVDRAAEYNVRTEFVEDGAENILVRKAPIIEKPGADQVIIHQCIEDCYYPGRHLDAEIRKVIYEDDL DGYIKKIQQWIEFVISDGIKSANSEDIYSSLLLPEFIDCIPINLITSPEGLVYIDREWRFMADFSLTTLLLRYLDRESNA AFINKHIRGQERPCGRLLHYLGIPFNDRIYMDYRRVNDIISKLVYLEKAPDFSRQEDISVMKKIDSYFHLLIQKISNWFC LSARG
Specific function: Unknown
COG id: COG2230
COG function: function code M; Cyclopropane fatty acid synthase and related methyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 64877; Mature: 64877
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFKLKDFNNDAKFNVSALPQRDAFLYSDGADVEKRIYEVLVQATDRTCFSRELASQIID CCEEECCCCCCCCEEEEECCCCCCEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHC WPSEYHFSSLRHNLLRHVTFTSSDNVLELGCGCGAITRQLGESGANVTAVEGNFDRAKCA CCCHHHHHHHHHHHHHHEEECCCCCEEEECCCCHHHHHHHCCCCCCEEEEECCCCHHHHH AARCEDLNNVEVFCSNFQDIAFQKQYDYVTMIGVFEYCSMYFKGDDPVPQCLDIVKSALK HHHHCCCCCHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHC PGGKLILAIENRLGLKYFAGIEEDHVGIPYYGIQDFYKPNTVATYGKVELSNLLSDNGFC CCCEEEEEEECCCCCCEECCCCCCCCCCCCCCHHHHCCCCCEEEECCEEHHHHHCCCCEE SIEYQYPFPDYKIPKVVFMESAFKNPLFRPAEIIRQLNSRAYSKKTTHQFSENLVWPVLE EEEEECCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHH ANKLIPDFSNSFLVFAGTENEKPATSNILAIYYTVDRAAEYNVRTEFVEDGAENILVRKA CCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHCCHHCEEEECC PIIEKPGADQVIIHQCIEDCYYPGRHLDAEIRKVIYEDDLDGYIKKIQQWIEFVISDGIK CCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCC SANSEDIYSSLLLPEFIDCIPINLITSPEGLVYIDREWRFMADFSLTTLLLRYLDRESNA CCCCHHHHHHHHHHHHHHHEEEEEEECCCCEEEECCCCEEEEHHHHHHHHHHHHCCCCCH AFINKHIRGQERPCGRLLHYLGIPFNDRIYMDYRRVNDIISKLVYLEKAPDFSRQEDISV HHHHHHHCCCCCHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCHHHHHH MKKIDSYFHLLIQKISNWFCLSARG HHHHHHHHHHHHHHHCCEEEEECCC >Mature Secondary Structure MKFKLKDFNNDAKFNVSALPQRDAFLYSDGADVEKRIYEVLVQATDRTCFSRELASQIID CCEEECCCCCCCCEEEEECCCCCCEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHC WPSEYHFSSLRHNLLRHVTFTSSDNVLELGCGCGAITRQLGESGANVTAVEGNFDRAKCA CCCHHHHHHHHHHHHHHEEECCCCCEEEECCCCHHHHHHHCCCCCCEEEEECCCCHHHHH AARCEDLNNVEVFCSNFQDIAFQKQYDYVTMIGVFEYCSMYFKGDDPVPQCLDIVKSALK HHHHCCCCCHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHC PGGKLILAIENRLGLKYFAGIEEDHVGIPYYGIQDFYKPNTVATYGKVELSNLLSDNGFC CCCEEEEEEECCCCCCEECCCCCCCCCCCCCCHHHHCCCCCEEEECCEEHHHHHCCCCEE SIEYQYPFPDYKIPKVVFMESAFKNPLFRPAEIIRQLNSRAYSKKTTHQFSENLVWPVLE EEEEECCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHH ANKLIPDFSNSFLVFAGTENEKPATSNILAIYYTVDRAAEYNVRTEFVEDGAENILVRKA CCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHCCHHCEEEECC PIIEKPGADQVIIHQCIEDCYYPGRHLDAEIRKVIYEDDLDGYIKKIQQWIEFVISDGIK CCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCC SANSEDIYSSLLLPEFIDCIPINLITSPEGLVYIDREWRFMADFSLTTLLLRYLDRESNA CCCCHHHHHHHHHHHHHHHEEEEEEECCCCEEEECCCCEEEEHHHHHHHHHHHHCCCCCH AFINKHIRGQERPCGRLLHYLGIPFNDRIYMDYRRVNDIISKLVYLEKAPDFSRQEDISV HHHHHHHCCCCCHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCHHHHHH MKKIDSYFHLLIQKISNWFCLSARG HHHHHHHHHHHHHHHCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA