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The map label for this gene is 118580494

Identifier: 118580494

GI number: 118580494

Start: 2233281

End: 2234264

Strand: Direct

Name: 118580494

Synonym: Ppro_2078

Alternate gene names: NA

Gene position: 2233281-2234264 (Clockwise)

Preceding gene: 118580493

Following gene: 118580495

Centisome position: 55.72

GC content: 58.94

Gene sequence:

>984_bases
ATGAAAAGCCGTCTTTGTCATGCGCTCCTTTCTCTGTTGATCCTGTTGCCGGCGTTCGCCACGCCGGCTGCGGCATTCAC
CTACCGCGACAAGATGGGGCGAACCGTTACGGTCACGACCCCGGTGAAACGGGCGGTGCTGTACGAAACCTATGAACTGC
TGCCGGTCACCGGCGCCTGGAACCAGATGGCGGGATTAAGCCGCTATGCATACAGCAATGATCTGCTGCTGGCCATCAAC
GCCAACAGACTGCGGAGGATTCCCGACGCGGGCAGCGCCATGGACACCAATGCGGAGGTGCTGCTGAAACTGAAGCCTGA
CGTAGTGTTGACCTGGACCGTCAATCCCGCCGCTGTTCGTTTTCTGGAGCACAAGGGGTTGACGGTGATCTCGGTCTATC
CCGAAAGCATCAACGAACTGTACGGGGTGATGCGCATGCAGGGCCAGCTCTTCGGACAAGAGAAACGTATTGAGAGTGCA
ATCGCCAGGATGGAGGGACTCTTCTCGCTGATCCGCAAACGGGTGGCCGCAATCCCCCCCTCGCAGCGCAAAACAGCGCT
CTACCTGACCGGCAAGCAGACCAGAGCAAATGGCCGCATCGGGGTTACCAACGACCTTTTCAACCTGATGGGATTGAAAA
ACGCCGGAAACGAGATCAACGAACGCTCCTGCGACGTCCCACTGGAGCGGATCATATCCTGGAACCCGGACCTGGTCTTC
ATCTGGGGCAGCGCCCGCTATTCAGCCGCTGACCTGAAAGGCAACCCCCAGTGGCGCCACATCAGGGCAGTCAAGAACGG
AGCGGTTTTCAAAGAGCCGAAATGGGGCACCTGGTCCCCCCGTTTGGCACCCATCGCCCTCTGGATGGCATCGCGCGCCT
ATCCGGAGCGGTTCCGGGACATCGATATCGACAAGACCATCGACCGCTTCTACCGCGACGTGTACGGCATTCCCTATGCC
AGGGCCAAACAGATCGAGAACTAA

Upstream 100 bases:

>100_bases
CTCCTTGAGCGTGAACAACCTGCTGGACCGCACCTATTACACCTACTACGTCGCACCGGGCCGCTCCTGGTTCGCCAATC
TCGACCTTAGGTTCTGAGCC

Downstream 100 bases:

>100_bases
AAACCAGCTATAAAGGAACAGGTATGGCAAGAACGAGAGATTTTGACGATTTCCTTAACGAATGGCTCAAAGACCCGGAA
AATGCTGCAACCTTTCTCAA

Product: periplasmic binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 327; Mature: 327

Protein sequence:

>327_residues
MKSRLCHALLSLLILLPAFATPAAAFTYRDKMGRTVTVTTPVKRAVLYETYELLPVTGAWNQMAGLSRYAYSNDLLLAIN
ANRLRRIPDAGSAMDTNAEVLLKLKPDVVLTWTVNPAAVRFLEHKGLTVISVYPESINELYGVMRMQGQLFGQEKRIESA
IARMEGLFSLIRKRVAAIPPSQRKTALYLTGKQTRANGRIGVTNDLFNLMGLKNAGNEINERSCDVPLERIISWNPDLVF
IWGSARYSAADLKGNPQWRHIRAVKNGAVFKEPKWGTWSPRLAPIALWMASRAYPERFRDIDIDKTIDRFYRDVYGIPYA
RAKQIEN

Sequences:

>Translated_327_residues
MKSRLCHALLSLLILLPAFATPAAAFTYRDKMGRTVTVTTPVKRAVLYETYELLPVTGAWNQMAGLSRYAYSNDLLLAIN
ANRLRRIPDAGSAMDTNAEVLLKLKPDVVLTWTVNPAAVRFLEHKGLTVISVYPESINELYGVMRMQGQLFGQEKRIESA
IARMEGLFSLIRKRVAAIPPSQRKTALYLTGKQTRANGRIGVTNDLFNLMGLKNAGNEINERSCDVPLERIISWNPDLVF
IWGSARYSAADLKGNPQWRHIRAVKNGAVFKEPKWGTWSPRLAPIALWMASRAYPERFRDIDIDKTIDRFYRDVYGIPYA
RAKQIEN
>Mature_327_residues
MKSRLCHALLSLLILLPAFATPAAAFTYRDKMGRTVTVTTPVKRAVLYETYELLPVTGAWNQMAGLSRYAYSNDLLLAIN
ANRLRRIPDAGSAMDTNAEVLLKLKPDVVLTWTVNPAAVRFLEHKGLTVISVYPESINELYGVMRMQGQLFGQEKRIESA
IARMEGLFSLIRKRVAAIPPSQRKTALYLTGKQTRANGRIGVTNDLFNLMGLKNAGNEINERSCDVPLERIISWNPDLVF
IWGSARYSAADLKGNPQWRHIRAVKNGAVFKEPKWGTWSPRLAPIALWMASRAYPERFRDIDIDKTIDRFYRDVYGIPYA
RAKQIEN

Specific function: Unknown

COG id: COG0614

COG function: function code P; ABC-type Fe3+-hydroxamate transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Fe/B12 periplasmic-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002491 [H]

Pfam domain/function: PF01497 Peripla_BP_2 [H]

EC number: NA

Molecular weight: Translated: 36973; Mature: 36973

Theoretical pI: Translated: 10.42; Mature: 10.42

Prosite motif: PS50983 FE_B12_PBP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSRLCHALLSLLILLPAFATPAAAFTYRDKMGRTVTVTTPVKRAVLYETYELLPVTGAW
CCHHHHHHHHHHHHHHHHHCCCHHHEEEHHHCCCEEEEECHHHHHHHHHHHHEEEECCCH
NQMAGLSRYAYSNDLLLAINANRLRRIPDAGSAMDTNAEVLLKLKPDVVLTWTVNPAAVR
HHHHHHHHHCCCCCEEEEEEHHHHHCCCCCCCCCCCCCEEEEEECCCEEEEEECCHHHHH
FLEHKGLTVISVYPESINELYGVMRMQGQLFGQEKRIESAIARMEGLFSLIRKRVAAIPP
HHHCCCCEEEEECCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
SQRKTALYLTGKQTRANGRIGVTNDLFNLMGLKNAGNEINERSCDVPLERIISWNPDLVF
CCCCEEEEEECCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCCCEEE
IWGSARYSAADLKGNPQWRHIRAVKNGAVFKEPKWGTWSPRLAPIALWMASRAYPERFRD
EECCCCEEECCCCCCCCHHEEEEHHCCCEEECCCCCCCCCCHHHHHHHHHHHHCHHHHCC
IDIDKTIDRFYRDVYGIPYARAKQIEN
CCHHHHHHHHHHHHHCCCCHHHHCCCC
>Mature Secondary Structure
MKSRLCHALLSLLILLPAFATPAAAFTYRDKMGRTVTVTTPVKRAVLYETYELLPVTGAW
CCHHHHHHHHHHHHHHHHHCCCHHHEEEHHHCCCEEEEECHHHHHHHHHHHHEEEECCCH
NQMAGLSRYAYSNDLLLAINANRLRRIPDAGSAMDTNAEVLLKLKPDVVLTWTVNPAAVR
HHHHHHHHHCCCCCEEEEEEHHHHHCCCCCCCCCCCCCEEEEEECCCEEEEEECCHHHHH
FLEHKGLTVISVYPESINELYGVMRMQGQLFGQEKRIESAIARMEGLFSLIRKRVAAIPP
HHHCCCCEEEEECCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
SQRKTALYLTGKQTRANGRIGVTNDLFNLMGLKNAGNEINERSCDVPLERIISWNPDLVF
CCCCEEEEEECCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCCCEEE
IWGSARYSAADLKGNPQWRHIRAVKNGAVFKEPKWGTWSPRLAPIALWMASRAYPERFRD
EECCCCEEECCCCCCCCHHEEEEHHCCCEEECCCCCCCCCCHHHHHHHHHHHHCHHHHCC
IDIDKTIDRFYRDVYGIPYARAKQIEN
CCHHHHHHHHHHHHHCCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]