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The map label for this gene is 118580379

Identifier: 118580379

GI number: 118580379

Start: 2107460

End: 2108431

Strand: Direct

Name: 118580379

Synonym: Ppro_1962

Alternate gene names: NA

Gene position: 2107460-2108431 (Clockwise)

Preceding gene: 118580378

Following gene: 118580380

Centisome position: 52.58

GC content: 58.13

Gene sequence:

>972_bases
ATGAAAGCTTTTGGGCCGGTACCATCGCGACGATTGGGGCGCAGCCTGGGCATCAATTCCATCCCACCCAAGGCATGCAC
CTACTCCTGTGTCTATTGCCAGGTGGGACGAACGTCCCATCTCCAAGTTGACCGCCGTCTGTTCTACCGGCCGGAAGAGA
TAGTCGAAGAGGTTGCGGCAAAGGTCGAACAAACGCGAGAAGCGGGCGACGTCATTGACTACCTGAGCTTTGTTCCCGAT
GGTGAGCCGACCCTGGACATCAATCTCGGCCGCACCATTGAACTTCTGAGACCGCTCGGTATCAGGATCGCGGTAATTAC
CAACGGCTCCCTTCTCTGGCGGGAAGATGTCAGGGAAGAACTGGGCAGTGCGGATCTAGTGTCGATCAAGCTGGATGCGG
TGAGCGAGAGCATTTGGCGCGGCATCGACAGGCCCCACGGCTCCTTAAGCCTCGAAACCGTCATGGACGGAATACTCGGC
TTTGCACGATCGTTCAGGGGAGAACTGATGACGGAGACGATGCTGGTGCAGGGATGCAACGACCGTGACAGGGATATGGA
ACAGGTCGCGGATTTCGTGGCGTTGCTTGCGCCAAAAACAGCATACCTCGCCATCCCCATCAGGCCTCCTGCCGAGAGCG
GGGTAAGGCCCCCTGACGAGGAGACAGTCAACCGTGCCTTTCAGATTTTCAGTCACCGTATCAGCCATGTTGAGTATCTG
ATCGGCTATGAGGGAGACAGCTTTTCCGGCAGCGGCAATCCGGAACAGGATTTGCTGGGCATCACCGCCGTCCACCCCAT
GAGGGCCGAGGCAGTGGAGAAGTTCCTGGGAGAAAGGGGACAGGACCGCACCCTGCTGCAACGACTGCTGGCGGAAGGGA
TTCTGGTGGAGACGGAATACCGGGGCATGAGATTCTTCCTGCGCAGGTTAGGAGCGCATCAGGTCAGGCCAGAGCAAGAA
GCTGCTCCCTGA

Upstream 100 bases:

>100_bases
ACCGGGACGGCCGCCTTCCCCGACTGACGACGCCTACGCACTCGCTGGAAGAATCGGAAACCGTAACAAATGAAACCGGA
GAGACCATGAGAATACAACC

Downstream 100 bases:

>100_bases
GGCACAGGTCGCTATATATCAAAAAACACTGCGCTCTTGACATCCACCATCAATGGGTGCTTTCTTGGCAATTTCGGCAT
TGAGCCACACCATTTCACAA

Product: radical SAM domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 323; Mature: 323

Protein sequence:

>323_residues
MKAFGPVPSRRLGRSLGINSIPPKACTYSCVYCQVGRTSHLQVDRRLFYRPEEIVEEVAAKVEQTREAGDVIDYLSFVPD
GEPTLDINLGRTIELLRPLGIRIAVITNGSLLWREDVREELGSADLVSIKLDAVSESIWRGIDRPHGSLSLETVMDGILG
FARSFRGELMTETMLVQGCNDRDRDMEQVADFVALLAPKTAYLAIPIRPPAESGVRPPDEETVNRAFQIFSHRISHVEYL
IGYEGDSFSGSGNPEQDLLGITAVHPMRAEAVEKFLGERGQDRTLLQRLLAEGILVETEYRGMRFFLRRLGAHQVRPEQE
AAP

Sequences:

>Translated_323_residues
MKAFGPVPSRRLGRSLGINSIPPKACTYSCVYCQVGRTSHLQVDRRLFYRPEEIVEEVAAKVEQTREAGDVIDYLSFVPD
GEPTLDINLGRTIELLRPLGIRIAVITNGSLLWREDVREELGSADLVSIKLDAVSESIWRGIDRPHGSLSLETVMDGILG
FARSFRGELMTETMLVQGCNDRDRDMEQVADFVALLAPKTAYLAIPIRPPAESGVRPPDEETVNRAFQIFSHRISHVEYL
IGYEGDSFSGSGNPEQDLLGITAVHPMRAEAVEKFLGERGQDRTLLQRLLAEGILVETEYRGMRFFLRRLGAHQVRPEQE
AAP
>Mature_323_residues
MKAFGPVPSRRLGRSLGINSIPPKACTYSCVYCQVGRTSHLQVDRRLFYRPEEIVEEVAAKVEQTREAGDVIDYLSFVPD
GEPTLDINLGRTIELLRPLGIRIAVITNGSLLWREDVREELGSADLVSIKLDAVSESIWRGIDRPHGSLSLETVMDGILG
FARSFRGELMTETMLVQGCNDRDRDMEQVADFVALLAPKTAYLAIPIRPPAESGVRPPDEETVNRAFQIFSHRISHVEYL
IGYEGDSFSGSGNPEQDLLGITAVHPMRAEAVEKFLGERGQDRTLLQRLLAEGILVETEYRGMRFFLRRLGAHQVRPEQE
AAP

Specific function: Unknown

COG id: COG0731

COG function: function code C; Fe-S oxidoreductases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0026 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006638
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 36090; Mature: 36090

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAFGPVPSRRLGRSLGINSIPPKACTYSCVYCQVGRTSHLQVDRRLFYRPEEIVEEVAA
CCCCCCCCHHHHHHHCCCCCCCCCHHEEEEEEEECCCCCHHHHHHHHHCCHHHHHHHHHH
KVEQTREAGDVIDYLSFVPDGEPTLDINLGRTIELLRPLGIRIAVITNGSLLWREDVREE
HHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHCCCCCEEEEEECCCEEEHHHHHHH
LGSADLVSIKLDAVSESIWRGIDRPHGSLSLETVMDGILGFARSFRGELMTETMLVQGCN
HCCCCEEEEEHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
DRDRDMEQVADFVALLAPKTAYLAIPIRPPAESGVRPPDEETVNRAFQIFSHRISHVEYL
CCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHE
IGYEGDSFSGSGNPEQDLLGITAVHPMRAEAVEKFLGERGQDRTLLQRLLAEGILVETEY
EEECCCCCCCCCCCHHHHEEHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEEHH
RGMRFFLRRLGAHQVRPEQEAAP
HHHHHHHHHHCHHCCCCCCCCCC
>Mature Secondary Structure
MKAFGPVPSRRLGRSLGINSIPPKACTYSCVYCQVGRTSHLQVDRRLFYRPEEIVEEVAA
CCCCCCCCHHHHHHHCCCCCCCCCHHEEEEEEEECCCCCHHHHHHHHHCCHHHHHHHHHH
KVEQTREAGDVIDYLSFVPDGEPTLDINLGRTIELLRPLGIRIAVITNGSLLWREDVREE
HHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHCCCCCEEEEEECCCEEEHHHHHHH
LGSADLVSIKLDAVSESIWRGIDRPHGSLSLETVMDGILGFARSFRGELMTETMLVQGCN
HCCCCEEEEEHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
DRDRDMEQVADFVALLAPKTAYLAIPIRPPAESGVRPPDEETVNRAFQIFSHRISHVEYL
CCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHE
IGYEGDSFSGSGNPEQDLLGITAVHPMRAEAVEKFLGERGQDRTLLQRLLAEGILVETEY
EEECCCCCCCCCCCHHHHEEHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEEEHH
RGMRFFLRRLGAHQVRPEQEAAP
HHHHHHHHHHCHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]