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The map label for this gene is ydbO [H]

Identifier: 118580378

GI number: 118580378

Start: 2106150

End: 2107463

Strand: Direct

Name: ydbO [H]

Synonym: Ppro_1961

Alternate gene names: 118580378

Gene position: 2106150-2107463 (Clockwise)

Preceding gene: 118580377

Following gene: 118580379

Centisome position: 52.55

GC content: 57.38

Gene sequence:

>1314_bases
ATGAATAGCGAAACAGCGCGACTACAACGACTGGGACAGGGGCAGAGGATAGCCCTGATTGCCACCTTGCTGACCCTGCT
TCTGGCCATCGTCAAGGGGATTGTCGGGCACTGGTTCGAATCGCCTTTGCTGGTTGCCGACGCCGTGCACAGCGCGGGCG
ACGTGGTCACCATAGCCGCCTCGGGTTTCGGCCTCTGGCTCGCCGCCAGAAAAAAATCCGAACAATTCCCCTATGGCCTG
TACAAGGCCGAAACACTGGCCGGCCTGTTCATCGGAGTGGTCGTGCTTTGGGCGGGGATCGAGATGGCCCGTGAAGGGTA
CGACAAGTTTTTCCACGCCGGCACAGCCATCGATTTTCCACTCCTGCCGGTCCTGGCCAGTGCGCTATCCATTGGAGTCG
ACTATGTCCTGGCACGGAAGGAGAGAGAGGTCGGACTGGCCATAAACTCCCAGTCGCTTCAGATCAAGGCTAGCGACACC
CTGCTGGACACCTACGTTTCCTGCGCGGTCCTGGTCGGCCTGATCCTGGCTTATCTGCGCATTCCCCATGTGGAGGGGTG
CCTGATCCTGGTGATCTCCCTGCTGATCCTCAAACTGGGGGGAGAAACCGTCTGGGTCTGCCTGCTCTCGCTGCTCGACG
CCAACCTGGATCCCGACGTGCGGTCTCAGATTGTCGGCAGGATCGAGGAGATCAATGGGGTCATGGGCACGCCACAGGTC
AGGGTGCGCCGTTCAGGGCCGTTCAGGATGGTGGAATGCACCATCGAGAGCAACCCGAACCTCCCGCTCTACCGTGCCCA
TGAACTGGCGGACAAGATCGAGGATGTCGTAACCGGCGAGTACCGGGATATCGAGACGGTTTTCGTCCATGTCGAACCGT
CGCGGGACAGAGCTATTACCGCCCTTATCCCGGTGGCGGAGATGAACGGTATCGACTCCAGAATCCACGCCCACTTCGGT
CGGAGCCCCTATTTCGTCGTAATCAGTATTTCGGAGCATGATACTGAAATCATTGACTTCTATCTTAACGAGTTCCTCGG
CGAGAAGATCCATATCGGGGTGAAGATCATAAAAGCGCTGCTCCAATGCAAACTGGGCCTGCTCTTCACCCGCGGCATCG
GAGAACTCTCCTTTTACATGCTCAAGGAGAATTTCATCGATATCTATGCCGTTACGGAAGAGCTCACCGTGGGTGAAATT
GTCCAGACCTACCGGGACGGCCGCCTTCCCCGACTGACGACGCCTACGCACTCGCTGGAAGAATCGGAAACCGTAACAAA
TGAAACCGGAGAGACCATGAGAATACAACCATGA

Upstream 100 bases:

>100_bases
GAAACAACCCGGTTCACCCTGTTTTCTCACGCCATGCCCCAAGTGCGGGGCGCGTATGGCCCGCAAATTCGAGAGCGAAA
ACTGACGGTGCATATCGGGT

Downstream 100 bases:

>100_bases
AAGCTTTTGGGCCGGTACCATCGCGACGATTGGGGCGCAGCCTGGGCATCAATTCCATCCCACCCAAGGCATGCACCTAC
TCCTGTGTCTATTGCCAGGT

Product: cation diffusion facilitator family transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 437; Mature: 437

Protein sequence:

>437_residues
MNSETARLQRLGQGQRIALIATLLTLLLAIVKGIVGHWFESPLLVADAVHSAGDVVTIAASGFGLWLAARKKSEQFPYGL
YKAETLAGLFIGVVVLWAGIEMAREGYDKFFHAGTAIDFPLLPVLASALSIGVDYVLARKEREVGLAINSQSLQIKASDT
LLDTYVSCAVLVGLILAYLRIPHVEGCLILVISLLILKLGGETVWVCLLSLLDANLDPDVRSQIVGRIEEINGVMGTPQV
RVRRSGPFRMVECTIESNPNLPLYRAHELADKIEDVVTGEYRDIETVFVHVEPSRDRAITALIPVAEMNGIDSRIHAHFG
RSPYFVVISISEHDTEIIDFYLNEFLGEKIHIGVKIIKALLQCKLGLLFTRGIGELSFYMLKENFIDIYAVTEELTVGEI
VQTYRDGRLPRLTTPTHSLEESETVTNETGETMRIQP

Sequences:

>Translated_437_residues
MNSETARLQRLGQGQRIALIATLLTLLLAIVKGIVGHWFESPLLVADAVHSAGDVVTIAASGFGLWLAARKKSEQFPYGL
YKAETLAGLFIGVVVLWAGIEMAREGYDKFFHAGTAIDFPLLPVLASALSIGVDYVLARKEREVGLAINSQSLQIKASDT
LLDTYVSCAVLVGLILAYLRIPHVEGCLILVISLLILKLGGETVWVCLLSLLDANLDPDVRSQIVGRIEEINGVMGTPQV
RVRRSGPFRMVECTIESNPNLPLYRAHELADKIEDVVTGEYRDIETVFVHVEPSRDRAITALIPVAEMNGIDSRIHAHFG
RSPYFVVISISEHDTEIIDFYLNEFLGEKIHIGVKIIKALLQCKLGLLFTRGIGELSFYMLKENFIDIYAVTEELTVGEI
VQTYRDGRLPRLTTPTHSLEESETVTNETGETMRIQP
>Mature_437_residues
MNSETARLQRLGQGQRIALIATLLTLLLAIVKGIVGHWFESPLLVADAVHSAGDVVTIAASGFGLWLAARKKSEQFPYGL
YKAETLAGLFIGVVVLWAGIEMAREGYDKFFHAGTAIDFPLLPVLASALSIGVDYVLARKEREVGLAINSQSLQIKASDT
LLDTYVSCAVLVGLILAYLRIPHVEGCLILVISLLILKLGGETVWVCLLSLLDANLDPDVRSQIVGRIEEINGVMGTPQV
RVRRSGPFRMVECTIESNPNLPLYRAHELADKIEDVVTGEYRDIETVFVHVEPSRDRAITALIPVAEMNGIDSRIHAHFG
RSPYFVVISISEHDTEIIDFYLNEFLGEKIHIGVKIIKALLQCKLGLLFTRGIGELSFYMLKENFIDIYAVTEELTVGEI
VQTYRDGRLPRLTTPTHSLEESETVTNETGETMRIQP

Specific function: Unknown

COG id: COG0053

COG function: function code P; Predicted Co/Zn/Cd cation transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family [H]

Homologues:

Organism=Escherichia coli, GI1790349, Length=224, Percent_Identity=23.6607142857143, Blast_Score=65, Evalue=1e-11,
Organism=Saccharomyces cerevisiae, GI6323831, Length=240, Percent_Identity=25.8333333333333, Blast_Score=64, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002524 [H]

Pfam domain/function: PF01545 Cation_efflux [H]

EC number: NA

Molecular weight: Translated: 48296; Mature: 48296

Theoretical pI: Translated: 5.19; Mature: 5.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSETARLQRLGQGQRIALIATLLTLLLAIVKGIVGHWFESPLLVADAVHSAGDVVTIAA
CCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCEEEEEE
SGFGLWLAARKKSEQFPYGLYKAETLAGLFIGVVVLWAGIEMAREGYDKFFHAGTAIDFP
CCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
LLPVLASALSIGVDYVLARKEREVGLAINSQSLQIKASDTLLDTYVSCAVLVGLILAYLR
HHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEEEECHHHHHHHHHHHHHHHHHHHHHH
IPHVEGCLILVISLLILKLGGETVWVCLLSLLDANLDPDVRSQIVGRIEEINGVMGTPQV
CCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCE
RVRRSGPFRMVECTIESNPNLPLYRAHELADKIEDVVTGEYRDIETVFVHVEPSRDRAIT
EEECCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCEEE
ALIPVAEMNGIDSRIHAHFGRSPYFVVISISEHDTEIIDFYLNEFLGEKIHIGVKIIKAL
EEEEHHHHCCCHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCEEHHHHHHHHH
LQCKLGLLFTRGIGELSFYMLKENFIDIYAVTEELTVGEIVQTYRDGRLPRLTTPTHSLE
HHHHHHHHHHCCCHHHHHHHHHHCCEEEEEEECCCHHHHHHHHHHCCCCCEECCCCCCCC
ESETVTNETGETMRIQP
CCHHHCCCCCCEEEECC
>Mature Secondary Structure
MNSETARLQRLGQGQRIALIATLLTLLLAIVKGIVGHWFESPLLVADAVHSAGDVVTIAA
CCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCEEEEEE
SGFGLWLAARKKSEQFPYGLYKAETLAGLFIGVVVLWAGIEMAREGYDKFFHAGTAIDFP
CCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
LLPVLASALSIGVDYVLARKEREVGLAINSQSLQIKASDTLLDTYVSCAVLVGLILAYLR
HHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEEEECHHHHHHHHHHHHHHHHHHHHHH
IPHVEGCLILVISLLILKLGGETVWVCLLSLLDANLDPDVRSQIVGRIEEINGVMGTPQV
CCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCE
RVRRSGPFRMVECTIESNPNLPLYRAHELADKIEDVVTGEYRDIETVFVHVEPSRDRAIT
EEECCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCEEE
ALIPVAEMNGIDSRIHAHFGRSPYFVVISISEHDTEIIDFYLNEFLGEKIHIGVKIIKAL
EEEEHHHHCCCHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCEEHHHHHHHHH
LQCKLGLLFTRGIGELSFYMLKENFIDIYAVTEELTVGEIVQTYRDGRLPRLTTPTHSLE
HHHHHHHHHHCCCHHHHHHHHHHCCEEEEEEECCCHHHHHHHHHHCCCCCEECCCCCCCC
ESETVTNETGETMRIQP
CCHHHCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]