Definition Pelobacter propionicus DSM 2379 chromosome, complete genome.
Accession NC_008609
Length 4,008,000

Click here to switch to the map view.

The map label for this gene is cbpA [C]

Identifier: 118580376

GI number: 118580376

Start: 2104844

End: 2105161

Strand: Direct

Name: cbpA [C]

Synonym: Ppro_1959

Alternate gene names: 118580376

Gene position: 2104844-2105161 (Clockwise)

Preceding gene: 118580375

Following gene: 118580377

Centisome position: 52.52

GC content: 56.29

Gene sequence:

>318_bases
ATGACCTACGTTGAACTGCAGGAAGCGCTGCTGGTGTTCGGGATTGGCGAGCGTGCCTCACGCGGGGAGATCAGGGCACG
GCACCGCCACCTGGTCAAGAAATATCATCCCGACGCCGGTGCCGAACCTGATCACGACCGGATCAGTAAAATCAACGCGG
CCTACCGGGTGCTGCTGGATTACATCGAATCATACCGGTTCTCCTTTGCAGAGGATGAGTTCTACGAGCAGAATACGGAC
GAACGGTTGAGGAGGCAGTTCATGGACGATCCGTTGTGGGGAAATAGCATGGGGACTCGGCATCACGAGGAAGAGTAA

Upstream 100 bases:

>100_bases
TCTGTACGGCATGCGCCGGGACGAACGCCGCGCCCTACTGGAAGAGTTTGACCTAAAGAATGCACAGGAGCGGGACGCGA
TACTCTGAAAGGGCATTTTC

Downstream 100 bases:

>100_bases
TGATCCTCGCATGGATACTACTTTTCAGCACCCTGGGGAGTGTGGGTGCTATGTCCGGTGGCGCCTTGTTGCTCTTGTTC
CCCCGGCATGTCATAAAAAA

Product: heat shock protein DnaJ domain-containing protein

Products: NA

Alternate protein names: Heat Shock Protein DNAJ Domain-Containing Protein; DNAJ Domain-Containing Protein; Heat Shock Protein DNAJ-Like; DNAJ-Like Protein; Chaperone DNAJ Domain-Containing Protein

Number of amino acids: Translated: 105; Mature: 104

Protein sequence:

>105_residues
MTYVELQEALLVFGIGERASRGEIRARHRHLVKKYHPDAGAEPDHDRISKINAAYRVLLDYIESYRFSFAEDEFYEQNTD
ERLRRQFMDDPLWGNSMGTRHHEEE

Sequences:

>Translated_105_residues
MTYVELQEALLVFGIGERASRGEIRARHRHLVKKYHPDAGAEPDHDRISKINAAYRVLLDYIESYRFSFAEDEFYEQNTD
ERLRRQFMDDPLWGNSMGTRHHEEE
>Mature_104_residues
TYVELQEALLVFGIGERASRGEIRARHRHLVKKYHPDAGAEPDHDRISKINAAYRVLLDYIESYRFSFAEDEFYEQNTDE
RLRRQFMDDPLWGNSMGTRHHEEE

Specific function: DNA-Binding Protein That Preferentially Recognizes A Curved DNA Sequence. It Is Probably A Functional Analog Of Dnaj; Displays Overlapping Activities With Dnaj, But Functions Under Different Conditions, Probably Acting As A Molecular Chaperone In An Adapt

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12529; Mature: 12398

Theoretical pI: Translated: 5.56; Mature: 5.56

Prosite motif: PS50076 DNAJ_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTYVELQEALLVFGIGERASRGEIRARHRHLVKKYHPDAGAEPDHDRISKINAAYRVLLD
CCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH
YIESYRFSFAEDEFYEQNTDERLRRQFMDDPLWGNSMGTRHHEEE
HHHHHHCCCCCHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TYVELQEALLVFGIGERASRGEIRARHRHLVKKYHPDAGAEPDHDRISKINAAYRVLLD
CHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH
YIESYRFSFAEDEFYEQNTDERLRRQFMDDPLWGNSMGTRHHEEE
HHHHHHCCCCCHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA