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The map label for this gene is yddQ [H]

Identifier: 118580286

GI number: 118580286

Start: 2009941

End: 2010501

Strand: Reverse

Name: yddQ [H]

Synonym: Ppro_1867

Alternate gene names: 118580286

Gene position: 2010501-2009941 (Counterclockwise)

Preceding gene: 118580287

Following gene: 118580285

Centisome position: 50.16

GC content: 52.23

Gene sequence:

>561_bases
ATGAAAACCGCCTTACTCATTATCGACATCCAGAACGACTACTTCCCCGGCGGCAAGATGGAGCTGGTCGGCAGTACCGA
AGCTGCGGCAGCTGCGGCTCGACTGTTGGCGGCTTTCAGAAAGCAAGCCTGGTCAATCTTCCATGTTCAGCATATCGCTG
CCCAACCAAGCCCCACCTTTTTTCTACCGGGGACACCGGGAGCAGATATTCATACCAGTGTTGCCCCATTACCGGGTGAA
TCGGTCATCACCAAACACTACCCTAGCAGTTTCCGCAACACCGACCTGCTGGAACAACTGAAATCTGCCGGTGTCGATAC
TCTGCTGATATGCGGTATGATGAGCCATATGTGCGTTGATACAACCGTCCGTGCTGCATTTGACCTTGGCTTCTCCTGCA
TTGTCACCCATGACGCTTGCGCAACCAGAGAACTGTCGTTCAAAGGCATCACAGTACCGGCAGAGCAGGTACATGCCTCA
TACATGTCAGCTCTTGGAGCGGTGTTTGCCCAAGTAAAGGGAGTCGATGAAATCCTTGATAACATGCAAGCGACAGTATA
A

Upstream 100 bases:

>100_bases
CATCAAGGAGCTTGACCAGAAGCTGAAGCAGGTTGAAACAGAGGTGTTGGATGCCTTCAAAGAACTGGAAAACAGCAATA
ATGCTTAAACGAGGAACCCT

Downstream 100 bases:

>100_bases
TCAGATGGAGTTAAAGCTAACGGCGATTATCAAACTGTATATCACCTTGAGGTAATACAGATGTGTGGTCGATTCGTGAC
AATCATCCCCTATGAAGAGT

Product: isochorismatase hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 186; Mature: 186

Protein sequence:

>186_residues
MKTALLIIDIQNDYFPGGKMELVGSTEAAAAAARLLAAFRKQAWSIFHVQHIAAQPSPTFFLPGTPGADIHTSVAPLPGE
SVITKHYPSSFRNTDLLEQLKSAGVDTLLICGMMSHMCVDTTVRAAFDLGFSCIVTHDACATRELSFKGITVPAEQVHAS
YMSALGAVFAQVKGVDEILDNMQATV

Sequences:

>Translated_186_residues
MKTALLIIDIQNDYFPGGKMELVGSTEAAAAAARLLAAFRKQAWSIFHVQHIAAQPSPTFFLPGTPGADIHTSVAPLPGE
SVITKHYPSSFRNTDLLEQLKSAGVDTLLICGMMSHMCVDTTVRAAFDLGFSCIVTHDACATRELSFKGITVPAEQVHAS
YMSALGAVFAQVKGVDEILDNMQATV
>Mature_186_residues
MKTALLIIDIQNDYFPGGKMELVGSTEAAAAAARLLAAFRKQAWSIFHVQHIAAQPSPTFFLPGTPGADIHTSVAPLPGE
SVITKHYPSSFRNTDLLEQLKSAGVDTLLICGMMSHMCVDTTVRAAFDLGFSCIVTHDACATRELSFKGITVPAEQVHAS
YMSALGAVFAQVKGVDEILDNMQATV

Specific function: Unknown

COG id: COG1335

COG function: function code Q; Amidases related to nicotinamidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the isochorismatase family [H]

Homologues:

Organism=Escherichia coli, GI87081992, Length=202, Percent_Identity=28.7128712871287, Blast_Score=74, Evalue=6e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000868 [H]

Pfam domain/function: PF00857 Isochorismatase [H]

EC number: NA

Molecular weight: Translated: 19883; Mature: 19883

Theoretical pI: Translated: 6.13; Mature: 6.13

Prosite motif: PS00290 IG_MHC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTALLIIDIQNDYFPGGKMELVGSTEAAAAAARLLAAFRKQAWSIFHVQHIAAQPSPTF
CCEEEEEEEECCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE
FLPGTPGADIHTSVAPLPGESVITKHYPSSFRNTDLLEQLKSAGVDTLLICGMMSHMCVD
EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHH
TTVRAAFDLGFSCIVTHDACATRELSFKGITVPAEQVHASYMSALGAVFAQVKGVDEILD
HHHHHHHHCCCEEEEECCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHH
NMQATV
HHHCCC
>Mature Secondary Structure
MKTALLIIDIQNDYFPGGKMELVGSTEAAAAAARLLAAFRKQAWSIFHVQHIAAQPSPTF
CCEEEEEEEECCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE
FLPGTPGADIHTSVAPLPGESVITKHYPSSFRNTDLLEQLKSAGVDTLLICGMMSHMCVD
EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHH
TTVRAAFDLGFSCIVTHDACATRELSFKGITVPAEQVHASYMSALGAVFAQVKGVDEILD
HHHHHHHHCCCEEEEECCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHH
NMQATV
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]