Click here to switch to the map view.

The map label for this gene is yoqW [H]

Identifier: 118580285

GI number: 118580285

Start: 2009212

End: 2009880

Strand: Reverse

Name: yoqW [H]

Synonym: Ppro_1866

Alternate gene names: 118580285

Gene position: 2009880-2009212 (Counterclockwise)

Preceding gene: 118580286

Following gene: 118580284

Centisome position: 50.15

GC content: 48.73

Gene sequence:

>669_bases
ATGTGTGGTCGATTCGTGACAATCATCCCCTATGAAGAGTTGAAGCAGATTTTTGACCTTGTGGAGAGTCAGACTCGCCC
CGAGCAACGCTACAATGTCGCCCCCACCCAGAGTGTTGGAGTAATCCGCCAAGCGGAGGACTCAACCAATCACTATGACC
AGTCGAAATGGGGACTGATTCCGTCTTGGTCAACGGACCCGTCAAAAGGAGCTTCACTGATAAATGCCCGATCGGAGACT
GTCGCAGAAAAACCCTCTTTTCGGCACGCTATCAAGAAAAACCGCTGTATCATCCCCGTGTCAGGTTTTTTTGAGTGGAG
CCATGCGGGGACGGAAAAGCATCCCCATTTCATTTGCTTGGCAGATAAATCAGTTATGGCACTGGCCGGTATCTGGGAAC
ATTGGAAATCTCCGGACGGAACCGTCTTGGAGACATTTTCCATTCTGACCACTTCCGCTAACAAGCTTATTTCAGGTCTT
CATGAACGCATGCCGGTAATTCTCCAGCCAGATACTTACGGATTATGGCTTGATAGAAACCTTCAGGACCCTCACCATTT
AGAACATCTCTATGCCCCTTTCCCGGATGAACTTATGACTTATTACATGGTTCCTGACCTTGTGAACAACCCTCGCTTCG
ATTCCCCGGCTTGCATAGTTTGTGTTTGA

Upstream 100 bases:

>100_bases
AGTCGATGAAATCCTTGATAACATGCAAGCGACAGTATAATCAGATGGAGTTAAAGCTAACGGCGATTATCAAACTGTAT
ATCACCTTGAGGTAATACAG

Downstream 100 bases:

>100_bases
TAAATCATATGACGGAGGCAGCGGCAAGCAAGATGACTATGTTTACTTCCAGTGAGAAGAAAAATATCATAAAGCTTCTC
AGTAGCGCCACAAACCAAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 222; Mature: 222

Protein sequence:

>222_residues
MCGRFVTIIPYEELKQIFDLVESQTRPEQRYNVAPTQSVGVIRQAEDSTNHYDQSKWGLIPSWSTDPSKGASLINARSET
VAEKPSFRHAIKKNRCIIPVSGFFEWSHAGTEKHPHFICLADKSVMALAGIWEHWKSPDGTVLETFSILTTSANKLISGL
HERMPVILQPDTYGLWLDRNLQDPHHLEHLYAPFPDELMTYYMVPDLVNNPRFDSPACIVCV

Sequences:

>Translated_222_residues
MCGRFVTIIPYEELKQIFDLVESQTRPEQRYNVAPTQSVGVIRQAEDSTNHYDQSKWGLIPSWSTDPSKGASLINARSET
VAEKPSFRHAIKKNRCIIPVSGFFEWSHAGTEKHPHFICLADKSVMALAGIWEHWKSPDGTVLETFSILTTSANKLISGL
HERMPVILQPDTYGLWLDRNLQDPHHLEHLYAPFPDELMTYYMVPDLVNNPRFDSPACIVCV
>Mature_222_residues
MCGRFVTIIPYEELKQIFDLVESQTRPEQRYNVAPTQSVGVIRQAEDSTNHYDQSKWGLIPSWSTDPSKGASLINARSET
VAEKPSFRHAIKKNRCIIPVSGFFEWSHAGTEKHPHFICLADKSVMALAGIWEHWKSPDGTVLETFSILTTSANKLISGL
HERMPVILQPDTYGLWLDRNLQDPHHLEHLYAPFPDELMTYYMVPDLVNNPRFDSPACIVCV

Specific function: Unknown

COG id: COG2135

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0361 family [H]

Homologues:

Organism=Homo sapiens, GI54607106, Length=272, Percent_Identity=30.8823529411765, Blast_Score=99, Evalue=2e-21,
Organism=Homo sapiens, GI54607104, Length=272, Percent_Identity=30.8823529411765, Blast_Score=99, Evalue=2e-21,
Organism=Escherichia coli, GI48994894, Length=188, Percent_Identity=32.4468085106383, Blast_Score=87, Evalue=1e-18,
Organism=Saccharomyces cerevisiae, GI6323761, Length=185, Percent_Identity=34.0540540540541, Blast_Score=100, Evalue=2e-22,
Organism=Drosophila melanogaster, GI21355761, Length=227, Percent_Identity=28.6343612334802, Blast_Score=84, Evalue=6e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003738 [H]

Pfam domain/function: PF02586 DUF159 [H]

EC number: NA

Molecular weight: Translated: 25265; Mature: 25265

Theoretical pI: Translated: 6.34; Mature: 6.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCGRFVTIIPYEELKQIFDLVESQTRPEQRYNVAPTQSVGVIRQAEDSTNHYDQSKWGLI
CCCCEEEEECHHHHHHHHHHHHHCCCCHHHCCCCCCCHHHHEECCCCCCCCCCCCCCCCC
PSWSTDPSKGASLINARSETVAEKPSFRHAIKKNRCIIPVSGFFEWSHAGTEKHPHFICL
CCCCCCCHHCHHHHHHHHHHHHCCCHHHHHHHCCCEEEEECCCEEECCCCCCCCCEEEEE
ADKSVMALAGIWEHWKSPDGTVLETFSILTTSANKLISGLHERMPVILQPDTYGLWLDRN
ECCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCEEEEECC
LQDPHHLEHLYAPFPDELMTYYMVPDLVNNPRFDSPACIVCV
CCCHHHHHHHCCCCCHHHHHHHHCHHHHCCCCCCCCEEEEEC
>Mature Secondary Structure
MCGRFVTIIPYEELKQIFDLVESQTRPEQRYNVAPTQSVGVIRQAEDSTNHYDQSKWGLI
CCCCEEEEECHHHHHHHHHHHHHCCCCHHHCCCCCCCHHHHEECCCCCCCCCCCCCCCCC
PSWSTDPSKGASLINARSETVAEKPSFRHAIKKNRCIIPVSGFFEWSHAGTEKHPHFICL
CCCCCCCHHCHHHHHHHHHHHHCCCHHHHHHHCCCEEEEECCCEEECCCCCCCCCEEEEE
ADKSVMALAGIWEHWKSPDGTVLETFSILTTSANKLISGLHERMPVILQPDTYGLWLDRN
ECCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCEEEEECC
LQDPHHLEHLYAPFPDELMTYYMVPDLVNNPRFDSPACIVCV
CCCHHHHHHHCCCCCHHHHHHHHCHHHHCCCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]