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The map label for this gene is selD

Identifier: 118580127

GI number: 118580127

Start: 1833071

End: 1834117

Strand: Direct

Name: selD

Synonym: Ppro_1707

Alternate gene names: 118580127

Gene position: 1833071-1834117 (Clockwise)

Preceding gene: 118580123

Following gene: 118580128

Centisome position: 45.74

GC content: 60.46

Gene sequence:

>1047_bases
ATGACTGACACAACCATACGACTCACCCAAACCGTCAAGGGAGCGGGGTGTGCCGCCAAACTTGCCCCCGGAGACCTGGA
TCGGGCCCTGTGCGGGCTGGACCTCCCCGTGGATCCCAATCTCCTTGTCGGCCTGGAACGTGCGGATGATGCCGGGGTCT
ACCGGATCTCGGACGATCTCGCCCTTGTCCAGACCATAGACTTCTTTCCACCCATGGTCGACGATCCCTACAGTTTCGGC
CAGATCGCCGCGGCCAATGCGCTGAGCGACATCTATGCCATGGGAGGGGTTCCCAAGACCGCCATGAACGTGGTGGCTTT
TCCGGCCAAAACCATGGATATCTCGGTCCTGCGCAGTGTTATCGAAGGCGGGCTGGACAAGATGCGGGAGGCCGGGGTTG
TTCTGGTTGGCGGGCATACCGTGGAGGACAGCGAGCTTAAGTACGGGCTTTCGGTAACGGGCTTCATCCACCCCGACCGC
ATCCTGACCAAGAAGAACCTGCAAACCGGCGATTGCCTGATTCTCACCAAGCCGCTGGGGACCGGGATCGTATCAACCGC
CATCAAGGCCGGCCTTGCCGGCAGTGATCTGACCGAAAGGGTCATCCGGAATATGACGGCTCTGAACCGTGACGCGGCTC
TGGTTATGGGGGATTTTACGGTGCATGCCTGCACGGATATCACCGGTTTCGGTTTTCTGGGGCATCTTGCCGAAATGGTG
GTGGATTCCGGCTGCGGGGTGCGCATAATTGCGGCGGATGTGCCGCACTACCCCGAAGCCCTGGAGTGGGCGGATATGGG
CCTGATTCCGGGAGGCGCCTACAACAACAGGGATTTCAGGGGGATGTTCGTCGATTTCGGAGCCGCTGTTTCCCGACGGT
TTCGTGATCTGCTTTTCGATCCCCAGACTTCCGGGGGCCTGCTGATCGCCGTTGCGCCCAACGAAGCTGAACAGCTCGTT
GCCGCGCTGAAGGCGACCGGAATCGAGTGCGCCGCGGTTGTGGGTGAGGTGGTTGAGGAGCCGCTGGAACGGATTGTCGT
GGAATAA

Upstream 100 bases:

>100_bases
CCGGTGAAGAAACGGTGTAATCCGCTACATGGCCTGTATCCGGGATACGCGATGATGTTTTGCCCTCTGCGCTATTTTGA
TCGTTGCAAGGAGCCTTTCA

Downstream 100 bases:

>100_bases
TAAACAGGGGGAAGTGTTATGCTGAACGATCTCGATTGCCGCGGTCTGGAATGTCCCGCCCCGGTGCTGCGGGTCAGACA
ATTCATCGAAGAGGAAAACC

Product: selenide, water dikinase

Products: NA

Alternate protein names: Selenium donor protein; Selenophosphate synthase

Number of amino acids: Translated: 348; Mature: 347

Protein sequence:

>348_residues
MTDTTIRLTQTVKGAGCAAKLAPGDLDRALCGLDLPVDPNLLVGLERADDAGVYRISDDLALVQTIDFFPPMVDDPYSFG
QIAAANALSDIYAMGGVPKTAMNVVAFPAKTMDISVLRSVIEGGLDKMREAGVVLVGGHTVEDSELKYGLSVTGFIHPDR
ILTKKNLQTGDCLILTKPLGTGIVSTAIKAGLAGSDLTERVIRNMTALNRDAALVMGDFTVHACTDITGFGFLGHLAEMV
VDSGCGVRIIAADVPHYPEALEWADMGLIPGGAYNNRDFRGMFVDFGAAVSRRFRDLLFDPQTSGGLLIAVAPNEAEQLV
AALKATGIECAAVVGEVVEEPLERIVVE

Sequences:

>Translated_348_residues
MTDTTIRLTQTVKGAGCAAKLAPGDLDRALCGLDLPVDPNLLVGLERADDAGVYRISDDLALVQTIDFFPPMVDDPYSFG
QIAAANALSDIYAMGGVPKTAMNVVAFPAKTMDISVLRSVIEGGLDKMREAGVVLVGGHTVEDSELKYGLSVTGFIHPDR
ILTKKNLQTGDCLILTKPLGTGIVSTAIKAGLAGSDLTERVIRNMTALNRDAALVMGDFTVHACTDITGFGFLGHLAEMV
VDSGCGVRIIAADVPHYPEALEWADMGLIPGGAYNNRDFRGMFVDFGAAVSRRFRDLLFDPQTSGGLLIAVAPNEAEQLV
AALKATGIECAAVVGEVVEEPLERIVVE
>Mature_347_residues
TDTTIRLTQTVKGAGCAAKLAPGDLDRALCGLDLPVDPNLLVGLERADDAGVYRISDDLALVQTIDFFPPMVDDPYSFGQ
IAAANALSDIYAMGGVPKTAMNVVAFPAKTMDISVLRSVIEGGLDKMREAGVVLVGGHTVEDSELKYGLSVTGFIHPDRI
LTKKNLQTGDCLILTKPLGTGIVSTAIKAGLAGSDLTERVIRNMTALNRDAALVMGDFTVHACTDITGFGFLGHLAEMVV
DSGCGVRIIAADVPHYPEALEWADMGLIPGGAYNNRDFRGMFVDFGAAVSRRFRDLLFDPQTSGGLLIAVAPNEAEQLVA
ALKATGIECAAVVGEVVEEPLERIVVE

Specific function: Synthesizes selenophosphate from selenide and ATP

COG id: COG0709

COG function: function code E; Selenophosphate synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the selenophosphate synthase 1 family. Class I subfamily

Homologues:

Organism=Homo sapiens, GI24797148, Length=355, Percent_Identity=30.9859154929577, Blast_Score=120, Evalue=1e-27,
Organism=Homo sapiens, GI15011844, Length=314, Percent_Identity=30.2547770700637, Blast_Score=115, Evalue=8e-26,
Organism=Escherichia coli, GI1788062, Length=352, Percent_Identity=40.625, Blast_Score=247, Evalue=1e-66,
Organism=Caenorhabditis elegans, GI17543426, Length=298, Percent_Identity=30.8724832214765, Blast_Score=118, Evalue=5e-27,
Organism=Drosophila melanogaster, GI24653602, Length=216, Percent_Identity=35.1851851851852, Blast_Score=116, Evalue=2e-26,
Organism=Drosophila melanogaster, GI24653604, Length=216, Percent_Identity=35.1851851851852, Blast_Score=116, Evalue=2e-26,
Organism=Drosophila melanogaster, GI28574119, Length=262, Percent_Identity=30.9160305343511, Blast_Score=101, Evalue=6e-22,
Organism=Drosophila melanogaster, GI28574118, Length=261, Percent_Identity=31.4176245210728, Blast_Score=101, Evalue=9e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SELD_PELPD (A1APP9)

Other databases:

- EMBL:   CP000482
- RefSeq:   YP_901377.1
- ProteinModelPortal:   A1APP9
- SMR:   A1APP9
- STRING:   A1APP9
- GeneID:   4572756
- GenomeReviews:   CP000482_GR
- KEGG:   ppd:Ppro_1707
- eggNOG:   COG0709
- HOGENOM:   HBG383791
- OMA:   CLVGGHT
- PhylomeDB:   A1APP9
- ProtClustDB:   CLSK961797
- HAMAP:   MF_00625
- InterPro:   IPR000728
- InterPro:   IPR010918
- InterPro:   IPR016188
- InterPro:   IPR004536
- InterPro:   IPR023061
- PIRSF:   PIRSF036407
- TIGRFAMs:   TIGR00476

Pfam domain/function: PF00586 AIRS; PF02769 AIRS_C; SSF56042 AIR_synth_C; SSF55326 PurM_N-like

EC number: =2.7.9.3

Molecular weight: Translated: 36779; Mature: 36648

Theoretical pI: Translated: 4.39; Mature: 4.39

Prosite motif: NA

Important sites: ACT_SITE 17-17

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDTTIRLTQTVKGAGCAAKLAPGDLDRALCGLDLPVDPNLLVGLERADDAGVYRISDDL
CCCCEEEEEEEECCCCCEEECCCCCHHHHHHCCCCCCCCCEEEEEECCCCCCEEEECCCH
ALVQTIDFFPPMVDDPYSFGQIAAANALSDIYAMGGVPKTAMNVVAFPAKTMDISVLRSV
HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHEEECCCCHHHHHHHHHH
IEGGLDKMREAGVVLVGGHTVEDSELKYGLSVTGFIHPDRILTKKNLQTGDCLILTKPLG
HHHHHHHHHHCCEEEECCEEECCCCEEECEEEEEEECCCHHEECCCCCCCCEEEEECCCC
TGIVSTAIKAGLAGSDLTERVIRNMTALNRDAALVMGDFTVHACTDITGFGFLGHLAEMV
CHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEEEECCEEEECCCCCHHHHHHHHHHHH
VDSGCGVRIIAADVPHYPEALEWADMGLIPGGAYNNRDFRGMFVDFGAAVSRRFRDLLFD
HCCCCCEEEEEECCCCCCCHHHHHHCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHCC
PQTSGGLLIAVAPNEAEQLVAALKATGIECAAVVGEVVEEPLERIVVE
CCCCCCEEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TDTTIRLTQTVKGAGCAAKLAPGDLDRALCGLDLPVDPNLLVGLERADDAGVYRISDDL
CCCEEEEEEEECCCCCEEECCCCCHHHHHHCCCCCCCCCEEEEEECCCCCCEEEECCCH
ALVQTIDFFPPMVDDPYSFGQIAAANALSDIYAMGGVPKTAMNVVAFPAKTMDISVLRSV
HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHEEECCCCHHHHHHHHHH
IEGGLDKMREAGVVLVGGHTVEDSELKYGLSVTGFIHPDRILTKKNLQTGDCLILTKPLG
HHHHHHHHHHCCEEEECCEEECCCCEEECEEEEEEECCCHHEECCCCCCCCEEEEECCCC
TGIVSTAIKAGLAGSDLTERVIRNMTALNRDAALVMGDFTVHACTDITGFGFLGHLAEMV
CHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEEEECCEEEECCCCCHHHHHHHHHHHH
VDSGCGVRIIAADVPHYPEALEWADMGLIPGGAYNNRDFRGMFVDFGAAVSRRFRDLLFD
HCCCCCEEEEEECCCCCCCHHHHHHCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHCC
PQTSGGLLIAVAPNEAEQLVAALKATGIECAAVVGEVVEEPLERIVVE
CCCCCCEEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA