| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
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The map label for this gene is 118580101
Identifier: 118580101
GI number: 118580101
Start: 1797748
End: 1798461
Strand: Direct
Name: 118580101
Synonym: Ppro_1679
Alternate gene names: NA
Gene position: 1797748-1798461 (Clockwise)
Preceding gene: 118580099
Following gene: 118580102
Centisome position: 44.85
GC content: 49.86
Gene sequence:
>714_bases ATGCTGAAGTATTTTGACAAGATCGTCAGGGGAACCGAGCAGGAGGATTCACGGGTCATCATCCAGTCACTGAAGGGTAT GATCGGCAATAATTTCACGCTCCTCAACTATTACAAGGAAATCCCGGTATCCTACGACGCGAAACTCCTCAGCGTGGAGA ACGAAATGGCCGAGTTCCAGGTTCACGAGTATCAGGCCAAAGTCATCAACCTTGAACGGACGGTCATGATCCAGTCCCGT AATACAAAGGCTTTTCTGGACGATATCTGTGGCGAGGCGTTTTACGTCAACAGTGCCAAAAAAAGAGTCATTATCTGCAG ATTCGCCTATGCCAAGATACGCTCCAGTCTGCGCCGTTTCGTGCGGGTTCGTCTGGACCGCCAAATCCAGGCTGAACTGA TGTATGAGGGGCAGTTTCTGTCAGGAAACGTAAAGGACCTGTCCTTGGGTGGGGCAGCCATTATCTTCGATTCCAATGAC ATTCTCCTGCCGGGCAGTGAGGTCAACCTGTCCCTGAAGATGCCGGACAGTTCAAGAGATACTATCACCGAAGTCGGTGT GATTGCGACGGTTGTCGATGTGTTTGGAGATGAGGCCCCCTTTACCTGTATCCTGGAATTTCATCCCGAAAAGCATTCCC AGCAGCAGATAGCCTATTTCATCAATCAGCGACAGGTTGAGATCATCAAGGAGTTGAAGGAACTTGTCGACTGA
Upstream 100 bases:
>100_bases TGTCGCTGGGAGAGATTTCTGATAAGCACATAAACATTTGCTCACTATAGAGCAATCATGCCGTTTGTCAATTCACAACC ACGCAATGGGAGTTTCCGGA
Downstream 100 bases:
>100_bases GATGTATGTCGCTGCCTAATTAAGGGGCATATTTCTCTCTTGCTGCCTATAATCAAGGCAGATGCACTGCTCGGGTCTGC CTTGATTTCCATCATCCACT
Product: type IV pilus assembly PilZ
Products: NA
Alternate protein names: PilZ Domain-Containing Protein
Number of amino acids: Translated: 237; Mature: 237
Protein sequence:
>237_residues MLKYFDKIVRGTEQEDSRVIIQSLKGMIGNNFTLLNYYKEIPVSYDAKLLSVENEMAEFQVHEYQAKVINLERTVMIQSR NTKAFLDDICGEAFYVNSAKKRVIICRFAYAKIRSSLRRFVRVRLDRQIQAELMYEGQFLSGNVKDLSLGGAAIIFDSND ILLPGSEVNLSLKMPDSSRDTITEVGVIATVVDVFGDEAPFTCILEFHPEKHSQQQIAYFINQRQVEIIKELKELVD
Sequences:
>Translated_237_residues MLKYFDKIVRGTEQEDSRVIIQSLKGMIGNNFTLLNYYKEIPVSYDAKLLSVENEMAEFQVHEYQAKVINLERTVMIQSR NTKAFLDDICGEAFYVNSAKKRVIICRFAYAKIRSSLRRFVRVRLDRQIQAELMYEGQFLSGNVKDLSLGGAAIIFDSND ILLPGSEVNLSLKMPDSSRDTITEVGVIATVVDVFGDEAPFTCILEFHPEKHSQQQIAYFINQRQVEIIKELKELVD >Mature_237_residues MLKYFDKIVRGTEQEDSRVIIQSLKGMIGNNFTLLNYYKEIPVSYDAKLLSVENEMAEFQVHEYQAKVINLERTVMIQSR NTKAFLDDICGEAFYVNSAKKRVIICRFAYAKIRSSLRRFVRVRLDRQIQAELMYEGQFLSGNVKDLSLGGAAIIFDSND ILLPGSEVNLSLKMPDSSRDTITEVGVIATVVDVFGDEAPFTCILEFHPEKHSQQQIAYFINQRQVEIIKELKELVD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27162; Mature: 27162
Theoretical pI: Translated: 5.44; Mature: 5.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKYFDKIVRGTEQEDSRVIIQSLKGMIGNNFTLLNYYKEIPVSYDAKLLSVENEMAEFQ CHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEEEHHHHCCCCCCCEEEEHHHHHHHHH VHEYQAKVINLERTVMIQSRNTKAFLDDICGEAFYVNSAKKRVIICRFAYAKIRSSLRRF HHHHHHHEEEEEEEEEEECCCCHHHHHHHCCCEEEECCCCCEEEEEEHHHHHHHHHHHHH VRVRLDRQIQAELMYEGQFLSGNVKDLSLGGAAIIFDSNDILLPGSEVNLSLKMPDSSRD HHHHHCHHHEEEHEECCEEECCCCEEEECCCEEEEECCCCEEECCCCEEEEEECCCCCCC TITEVGVIATVVDVFGDEAPFTCILEFHPEKHSQQQIAYFINQRQVEIIKELKELVD HHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLKYFDKIVRGTEQEDSRVIIQSLKGMIGNNFTLLNYYKEIPVSYDAKLLSVENEMAEFQ CHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEEEHHHHCCCCCCCEEEEHHHHHHHHH VHEYQAKVINLERTVMIQSRNTKAFLDDICGEAFYVNSAKKRVIICRFAYAKIRSSLRRF HHHHHHHEEEEEEEEEEECCCCHHHHHHHCCCEEEECCCCCEEEEEEHHHHHHHHHHHHH VRVRLDRQIQAELMYEGQFLSGNVKDLSLGGAAIIFDSNDILLPGSEVNLSLKMPDSSRD HHHHHCHHHEEEHEECCEEECCCCEEEECCCEEEEECCCCEEECCCCEEEEEECCCCCCC TITEVGVIATVVDVFGDEAPFTCILEFHPEKHSQQQIAYFINQRQVEIIKELKELVD HHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA