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The map label for this gene is yuxH [H]

Identifier: 118580035

GI number: 118580035

Start: 1727247

End: 1728479

Strand: Direct

Name: yuxH [H]

Synonym: Ppro_1612

Alternate gene names: 118580035

Gene position: 1727247-1728479 (Clockwise)

Preceding gene: 118580034

Following gene: 118580036

Centisome position: 43.09

GC content: 57.18

Gene sequence:

>1233_bases
GTGGAAAAAAGATCGGACAAGTTCTTCCTCGGGCGCCAGCCCATCCTGAATCGCCATCAGGAGATCATCGGTTTCGAGCT
GCTTTTCAGGTCCACCGATTTTAATGCAGCCAGTTTCACCAACTACTCCCACGCCAGCGCCAGTGTCATCAGCAACGTCA
TGTCCAGCTTCGGCATCGAGGAGGTTTTGGGGGGAAAGCTCGGCTTCATCAATGTCAACCTCGAAGTGCTCTTCTCCGAA
TTCATCGAACTGCTCCCCATCGGCCAGACGGTCATCGAACTGCTGGAGATCATCGATCTGAACGAACATGTGGTGGAACG
TTGCCGGGAACTGAGAAAGCTCGGTTTCCAGCTGGCGTTGGACGATCATGAGTACAGCGAGGAGCATGACGAGATCTACA
AGGTCATTCATATCGTCAAGATCGATATCCTGCAGAGCGATATGAGCAAACTGCCTGAGATCGTGCGCACCTTCCGCCGC
CGTCGCATACGGGTGCTGGCTGAGAAGGTGGAGACGGTGGAGCAGTTCGAGGCCTGTTTCAGGATGGGCTTCGACTATTT
CCAGGGCTACTTCTTCGAGCGGCCGGTGATCCTCAACAGAAAGCGCATCGACGTGTCGGCCATGGCCATGATGAAGCTTC
TGCAGCAGTTGATCATGGATGCCTCGCTGTCGGAGCTGGAACAGACCTTCAAGGAGAACCCCGGCCTTTCCTACAACCTA
CTGCGTCTGGTCAATTCCGTGGGCATTGGCCTGCGCAACAAGATCAAGAACCTGCGTCATGCCATCGTGCTCCTGGGACT
CAACCAGCTCAGACGCTGGGCTCAACTGTCGTTGTTCGCCATCAACGACAGCCGCGGTCTGAACCACCCCCTGCTGGAGA
TGGCGGTGGTGCGGGGGCATATGATGGAACATCTGACTGACGGTAAACGCTCCCAGGACGAATACGGTGAGGCCGCCTTC
ATGACCGGCATCCTGTCGCTTTTGGATGTGCTCTTCGAAACTCCCATGGAGGAGATCGTGGAGGGGCTGCATCTGAGCGA
CGACGTGAGCGCGGCGCTGCTCTCCCGTCAGGGGAAGCTGGGCATGCTGCTGGCCCTGGCGGAGAAGGTGGAAACCACCG
ATTTCGATGCCGTCATCCCCATGTTGGATGAGTGCAATGTCACCATGACTCAGCTGCTGGCGGCCCAGATGGAGGCCTTT
GGCTGGCGGGCGGGGGTGATCGCGCAGAAGTAG

Upstream 100 bases:

>100_bases
GCCGTGCGAGGCGGTAAAGCAGGGAGGTGTCCACAAGATAACGCCGCTTCAACATATTGCAGCCGAGGTGCTGCGACTCT
GCTGCTAAAGGATTGTTTTT

Downstream 100 bases:

>100_bases
GTCTTGCATGGGGGTGGTGTACTCCGTTCCGGCGTTCCCCTTTGCTCTGACCTCTGTTTTCCTCCCGACCAACGGTTCTT
TCCTTTCTTGACACCCCCAG

Product: diguanylate phosphodiesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 410; Mature: 410

Protein sequence:

>410_residues
MEKRSDKFFLGRQPILNRHQEIIGFELLFRSTDFNAASFTNYSHASASVISNVMSSFGIEEVLGGKLGFINVNLEVLFSE
FIELLPIGQTVIELLEIIDLNEHVVERCRELRKLGFQLALDDHEYSEEHDEIYKVIHIVKIDILQSDMSKLPEIVRTFRR
RRIRVLAEKVETVEQFEACFRMGFDYFQGYFFERPVILNRKRIDVSAMAMMKLLQQLIMDASLSELEQTFKENPGLSYNL
LRLVNSVGIGLRNKIKNLRHAIVLLGLNQLRRWAQLSLFAINDSRGLNHPLLEMAVVRGHMMEHLTDGKRSQDEYGEAAF
MTGILSLLDVLFETPMEEIVEGLHLSDDVSAALLSRQGKLGMLLALAEKVETTDFDAVIPMLDECNVTMTQLLAAQMEAF
GWRAGVIAQK

Sequences:

>Translated_410_residues
MEKRSDKFFLGRQPILNRHQEIIGFELLFRSTDFNAASFTNYSHASASVISNVMSSFGIEEVLGGKLGFINVNLEVLFSE
FIELLPIGQTVIELLEIIDLNEHVVERCRELRKLGFQLALDDHEYSEEHDEIYKVIHIVKIDILQSDMSKLPEIVRTFRR
RRIRVLAEKVETVEQFEACFRMGFDYFQGYFFERPVILNRKRIDVSAMAMMKLLQQLIMDASLSELEQTFKENPGLSYNL
LRLVNSVGIGLRNKIKNLRHAIVLLGLNQLRRWAQLSLFAINDSRGLNHPLLEMAVVRGHMMEHLTDGKRSQDEYGEAAF
MTGILSLLDVLFETPMEEIVEGLHLSDDVSAALLSRQGKLGMLLALAEKVETTDFDAVIPMLDECNVTMTQLLAAQMEAF
GWRAGVIAQK
>Mature_410_residues
MEKRSDKFFLGRQPILNRHQEIIGFELLFRSTDFNAASFTNYSHASASVISNVMSSFGIEEVLGGKLGFINVNLEVLFSE
FIELLPIGQTVIELLEIIDLNEHVVERCRELRKLGFQLALDDHEYSEEHDEIYKVIHIVKIDILQSDMSKLPEIVRTFRR
RRIRVLAEKVETVEQFEACFRMGFDYFQGYFFERPVILNRKRIDVSAMAMMKLLQQLIMDASLSELEQTFKENPGLSYNL
LRLVNSVGIGLRNKIKNLRHAIVLLGLNQLRRWAQLSLFAINDSRGLNHPLLEMAVVRGHMMEHLTDGKRSQDEYGEAAF
MTGILSLLDVLFETPMEEIVEGLHLSDDVSAALLSRQGKLGMLLALAEKVETTDFDAVIPMLDECNVTMTQLLAAQMEAF
GWRAGVIAQK

Specific function: Unknown

COG id: COG3434

COG function: function code T; Predicted signal transduction protein containing EAL and modified HD-GYP domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 EAL domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014408
- InterPro:   IPR001633
- InterPro:   IPR013976 [H]

Pfam domain/function: PF00563 EAL; PF08668 HDOD [H]

EC number: NA

Molecular weight: Translated: 46829; Mature: 46829

Theoretical pI: Translated: 5.23; Mature: 5.23

Prosite motif: PS50883 EAL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKRSDKFFLGRQPILNRHQEIIGFELLFRSTDFNAASFTNYSHASASVISNVMSSFGIE
CCCCCCCEEECCCHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCHHHHHHHHHHHHHCCHH
EVLGGKLGFINVNLEVLFSEFIELLPIGQTVIELLEIIDLNEHVVERCRELRKLGFQLAL
HHHCCCCEEEECHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEE
DDHEYSEEHDEIYKVIHIVKIDILQSDMSKLPEIVRTFRRRRIRVLAEKVETVEQFEACF
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RMGFDYFQGYFFERPVILNRKRIDVSAMAMMKLLQQLIMDASLSELEQTFKENPGLSYNL
HHCHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHH
LRLVNSVGIGLRNKIKNLRHAIVLLGLNQLRRWAQLSLFAINDSRGLNHPLLEMAVVRGH
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCHHHHHHHHHHH
MMEHLTDGKRSQDEYGEAAFMTGILSLLDVLFETPMEEIVEGLHLSDDVSAALLSRQGKL
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHCCCCH
GMLLALAEKVETTDFDAVIPMLDECNVTMTQLLAAQMEAFGWRAGVIAQK
HHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MEKRSDKFFLGRQPILNRHQEIIGFELLFRSTDFNAASFTNYSHASASVISNVMSSFGIE
CCCCCCCEEECCCHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCHHHHHHHHHHHHHCCHH
EVLGGKLGFINVNLEVLFSEFIELLPIGQTVIELLEIIDLNEHVVERCRELRKLGFQLAL
HHHCCCCEEEECHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEE
DDHEYSEEHDEIYKVIHIVKIDILQSDMSKLPEIVRTFRRRRIRVLAEKVETVEQFEACF
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RMGFDYFQGYFFERPVILNRKRIDVSAMAMMKLLQQLIMDASLSELEQTFKENPGLSYNL
HHCHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHH
LRLVNSVGIGLRNKIKNLRHAIVLLGLNQLRRWAQLSLFAINDSRGLNHPLLEMAVVRGH
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCHHHHHHHHHHH
MMEHLTDGKRSQDEYGEAAFMTGILSLLDVLFETPMEEIVEGLHLSDDVSAALLSRQGKL
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHCCCCH
GMLLALAEKVETTDFDAVIPMLDECNVTMTQLLAAQMEAFGWRAGVIAQK
HHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2507523; 9274030; 9384377; 1943994 [H]