| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
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The map label for this gene is aroF [H]
Identifier: 118580008
GI number: 118580008
Start: 1692178
End: 1693197
Strand: Direct
Name: aroF [H]
Synonym: Ppro_1585
Alternate gene names: 118580008
Gene position: 1692178-1693197 (Clockwise)
Preceding gene: 118580007
Following gene: 118580009
Centisome position: 42.22
GC content: 61.76
Gene sequence:
>1020_bases ATGATCATCGTCATGAAGGCCGGGGCAACCAAGAAGGAACGGGACGAGGTATTGAAGCGCATCAGGGAACTGGGCTACAA GCCGCATGTCATCCACGGTTCCACCAGGGACGTGATCGGGGCCATCGGAGACGAGCGGGGAAAGGCGGTGTTGCAGAAGG TGGAATCCATGCACGGAGTCGAGAATGTCCTGCCGATCCTCCAGCCGTACAAGTTGGCTTCCAAGGAGCTGAAGAAAGAG GCCAGTCTGGTGCGGGTCAACGATCAGGTCTGCATCGGCGGCCAGCAGTTGATCGTCATGGCCGGCCCCTGTTCCGTGGA GAGCGAGGAGCAGATCATCGAGTCGGCGATAGCGGTGAAGGCGGCCGGGGCGCAGATGCTGCGGGGCGGTGCCTTCAAGC CGCGCACCTCTCCCTACTCCTTCCAGGGGATGGAGGAAGAGGGGCTAAAACTCTTGGCCAAGGCGCGCGAGGTAACCGGT CTTCCCTTTGTCACCGAGGTGATCAACCCGGAGACCGCCGAACTGGTTGCCGAATACTCCGACATGCTGCAGATCGGCGC CCGCAACGCACAGAACTTCGCCCTATTGAAGAAGGTCGGTCAGCTCAAACGTCCTGTGCTGCTGAAACGGGGTATGTCCA TGACGATCCAGGAGTTCCTGATGAGCGCCGAGTACATCATGAGCGAGGGAAACCAGTCGGTGATCCTCTGCGAGCGGGGT ATCCGCACCTTCGAGACAGCCACCCGCAACACGCTGGACCTGTCGGCCATACCGGTGCTGAAAGGGAAGACCCATCTGCC GGTGGTGATCGATCCCTCCCACGGCACCGGCAACCACCACTATGTTGCGCCCATGTGCTACGCCGCCGTGGCGGCAGGAG CAGACGGGCTGATGGTGGAGGTGCACCCCGACCCGGAAAACGCCTCCAGCGACGGCGCCCAGTCGCTCAAGCCGGTTAAG TTCGCCGCCATGATGGAAAAGCTGAAGCTGTTCGCCGCGGCGGCAGGGAGGACCCTCTAG
Upstream 100 bases:
>100_bases TCTCCCCGGCTTTTTTTATGCAGCCGCACCAGGTGCGGGTTCAGGAGCCGGGGGGGAACCTTCCGGCTCCTGTTCGTTTT GTGGCCAAAAAGGAGCAGAG
Downstream 100 bases:
>100_bases GTCGGAGTGCCCAGCCAACCTCCCGCCCTCTCCCGGAGCGGGGAAGCTGCGTTATACTGGGAGAACGCCGTTCGATCGGG GGGCGGCGTTCCCTGTTTCC
Product: 3-deoxy-7-phosphoheptulonate synthase
Products: NA
Alternate protein names: 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase; DAHP synthase; Phospho-2-keto-3-deoxyheptonate aldolase [H]
Number of amino acids: Translated: 339; Mature: 339
Protein sequence:
>339_residues MIIVMKAGATKKERDEVLKRIRELGYKPHVIHGSTRDVIGAIGDERGKAVLQKVESMHGVENVLPILQPYKLASKELKKE ASLVRVNDQVCIGGQQLIVMAGPCSVESEEQIIESAIAVKAAGAQMLRGGAFKPRTSPYSFQGMEEEGLKLLAKAREVTG LPFVTEVINPETAELVAEYSDMLQIGARNAQNFALLKKVGQLKRPVLLKRGMSMTIQEFLMSAEYIMSEGNQSVILCERG IRTFETATRNTLDLSAIPVLKGKTHLPVVIDPSHGTGNHHYVAPMCYAAVAAGADGLMVEVHPDPENASSDGAQSLKPVK FAAMMEKLKLFAAAAGRTL
Sequences:
>Translated_339_residues MIIVMKAGATKKERDEVLKRIRELGYKPHVIHGSTRDVIGAIGDERGKAVLQKVESMHGVENVLPILQPYKLASKELKKE ASLVRVNDQVCIGGQQLIVMAGPCSVESEEQIIESAIAVKAAGAQMLRGGAFKPRTSPYSFQGMEEEGLKLLAKAREVTG LPFVTEVINPETAELVAEYSDMLQIGARNAQNFALLKKVGQLKRPVLLKRGMSMTIQEFLMSAEYIMSEGNQSVILCERG IRTFETATRNTLDLSAIPVLKGKTHLPVVIDPSHGTGNHHYVAPMCYAAVAAGADGLMVEVHPDPENASSDGAQSLKPVK FAAMMEKLKLFAAAAGRTL >Mature_339_residues MIIVMKAGATKKERDEVLKRIRELGYKPHVIHGSTRDVIGAIGDERGKAVLQKVESMHGVENVLPILQPYKLASKELKKE ASLVRVNDQVCIGGQQLIVMAGPCSVESEEQIIESAIAVKAAGAQMLRGGAFKPRTSPYSFQGMEEEGLKLLAKAREVTG LPFVTEVINPETAELVAEYSDMLQIGARNAQNFALLKKVGQLKRPVLLKRGMSMTIQEFLMSAEYIMSEGNQSVILCERG IRTFETATRNTLDLSAIPVLKGKTHLPVVIDPSHGTGNHHYVAPMCYAAVAAGADGLMVEVHPDPENASSDGAQSLKPVK FAAMMEKLKLFAAAAGRTL
Specific function: Catalyzes the condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP) [H]
COG id: COG2876
COG function: function code E; 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I DAHP synthase family [H]
Homologues:
Organism=Escherichia coli, GI1787466, Length=208, Percent_Identity=26.9230769230769, Blast_Score=82, Evalue=5e-17,
Paralogues:
None
Copy number: 200 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR006218 - InterPro: IPR006268 [H]
Pfam domain/function: PF00793 DAHP_synth_1 [H]
EC number: =2.5.1.54 [H]
Molecular weight: Translated: 36716; Mature: 36716
Theoretical pI: Translated: 8.59; Mature: 8.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIIVMKAGATKKERDEVLKRIRELGYKPHVIHGSTRDVIGAIGDERGKAVLQKVESMHGV CEEEEECCCCHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHCCHHHHHHHHHHHHHHCH ENVLPILQPYKLASKELKKEASLVRVNDQVCIGGQQLIVMAGPCSVESEEQIIESAIAVK HHHHHHHCCHHHHHHHHHHHHHEEEECCEEEECCCEEEEEECCCCCCHHHHHHHHHHHHH AAGAQMLRGGAFKPRTSPYSFQGMEEEGLKLLAKAREVTGLPFVTEVINPETAELVAEYS HHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHH DMLQIGARNAQNFALLKKVGQLKRPVLLKRGMSMTIQEFLMSAEYIMSEGNQSVILCERG HHHHHCCCCCHHHHHHHHHHHHHCHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEEECCC IRTFETATRNTLDLSAIPVLKGKTHLPVVIDPSHGTGNHHYVAPMCYAAVAAGADGLMVE CHHHHHHCCCCCCCEEEEEECCCCCCCEEEECCCCCCCCCCHHHHHHHHHHCCCCCEEEE VHPDPENASSDGAQSLKPVKFAAMMEKLKLFAAAAGRTL ECCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MIIVMKAGATKKERDEVLKRIRELGYKPHVIHGSTRDVIGAIGDERGKAVLQKVESMHGV CEEEEECCCCHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHCCHHHHHHHHHHHHHHCH ENVLPILQPYKLASKELKKEASLVRVNDQVCIGGQQLIVMAGPCSVESEEQIIESAIAVK HHHHHHHCCHHHHHHHHHHHHHEEEECCEEEECCCEEEEEECCCCCCHHHHHHHHHHHHH AAGAQMLRGGAFKPRTSPYSFQGMEEEGLKLLAKAREVTGLPFVTEVINPETAELVAEYS HHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHH DMLQIGARNAQNFALLKKVGQLKRPVLLKRGMSMTIQEFLMSAEYIMSEGNQSVILCERG HHHHHCCCCCHHHHHHHHHHHHHCHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEEECCC IRTFETATRNTLDLSAIPVLKGKTHLPVVIDPSHGTGNHHYVAPMCYAAVAAGADGLMVE CHHHHHHCCCCCCCEEEEEECCCCCCCEEEECCCCCCCCCCHHHHHHHHHHCCCCCEEEE VHPDPENASSDGAQSLKPVKFAAMMEKLKLFAAAAGRTL ECCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10360571; 12743122 [H]