| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
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The map label for this gene is ygfJ [C]
Identifier: 118579968
GI number: 118579968
Start: 1649081
End: 1650262
Strand: Reverse
Name: ygfJ [C]
Synonym: Ppro_1545
Alternate gene names: 118579968
Gene position: 1650262-1649081 (Counterclockwise)
Preceding gene: 118579969
Following gene: 118579967
Centisome position: 41.17
GC content: 64.89
Gene sequence:
>1182_bases ATGGATAGCAACGCCAGCGGGGCGTCTGAACACGTCCCCGAGTCCGGAAAGGGAACCGACATGACCCATACCAGCACGAC CCTGATCCTCTCGGCCGGTTTTTCCTCGCGCATGGGCGACTTCAAGCCGCTGCTCCCCCTGGGGGGGATGACGGTTCTGG AGCGCAGCGTTTCCCTGTTCCGCTCGGCCGGCGTGGAGGATATCCGCGTGGTCATCGGCCACCGTGCGGAAGAGTTGCAA CCGCTGCTCACCCACCTGGGGGTCCGGGGAATCCTGAATCCCCGCTACCGGGAGGGGATGTTCACTTCCGTGGTGGCTGG TGCGGAAACCATTGCCGACGGCCGCGCCCCCTTTTTCGTCATCCCGGTGGATATCCCGCTGGTCAGGACGGCCACCATCC GCCACCTGCTGGAGGAGTACGAGGAAGGAAGAGATGATGTGCTCTACCCCGCCTTTCAGGGGGTGCGCGGCCACCCGCCG CTGATCGCCGCCAGGCACGCCCGGGAGATCGTGAAGTGGCGCGGAAACGACGGTCTGCGGGGAGCGCTGGGACAGTGGGA AGACGGCTCCCGGAGCATAGCGGTCAGCGACGGGCACATCCTCAATGACATGGACACCCCCGAGGCCTATGCCGGGCTTC TGGAGAAGGTCACCCGCTACGAGATTCCCACTGAAGCGGAATGCATGGCGTTGCTGGAAATGCTCTTGCCGGCGGATTCC CCCATCATCCGTCACGGACGGGCCGTGGCTGACCTGGCGCTGACGATGGCCGGCAGACTTAACCGCCACGACTATGACCT GGACACCCGACTCCTGGAGGCGGCCGGTCTGCTGCACGACCTTGCCAGGGCCGAGGCGGACCATGCCCAGGCCGGAGCCC GCCTGCTGCGGGAGGCCGGTTTCGGAGCGGTGGCGGAACTGGTGGCCAGCCACATGGATATCACGCCAGGCACGGGAGTG CGGATCACCCCCCATGAGCTGCTCTACCTGGCGGACAAGCTGGTGCAGGGGGATCGCCGCGTCACCCTGTCCGAACGCTT CCGTGTCGCCCTGGAGCGCCATGGCCATGACCCTGCTATTTTAAAGAACGTTACCAACCGGTTACACGCGGCACTCAGCA TACAAACACGCCTGGAAGCCACTCTGGGGTGCCCCATGGCAGAGGTTATCAGCAGACAATGA
Upstream 100 bases:
>100_bases GTCCTGACCCTGGACACTGACGGGACGGGATGCTCTGCACCGTCGCCCACCATCAAGCGGGCCATCATCGATACCCGGCA AGGCTCCGGTCCATGACCCC
Downstream 100 bases:
>100_bases GCGACACACACAACCGCAACTACCCCACCACCGTCTTTCTCATGCGCCATGGCGATATCCGCCAGGACAACGTCAGACGG TACATCGGACAGGCGGACAT
Product: metal dependent phosphohydrolase
Products: NA
Alternate protein names: 4-Diphosphocytidyl-2C-Methyl-D-Erythritol Synthase; Molybdenum Cofactor Cytidylyltransferase; Molybdopterin-Guanine Dinucleotide Biosynthesis Protein A; 4-Diphosphocytidyl-2C-Methyl-D-Erythritolsynthas E; Molybdenum Hydroxylase Accessory Protein YgfJ Family; MobA-Like Protein-Like Protein; MobA-Like Protein-Like; Molybdenum Cofactor Biosynthesis Protein; Transcriptional Regulator LysR Family; HD Domain-Containing Protein; Metal-Dependent Phosphohydrolase HD Sub Domain Protein; Hypotehtical YgfJ; Hydrolase HD Superfamily Protein; MobA-Like Protein; L-Seryl-TRNA(Ser) Selenium Transferase Protein; Regulatory Protein; Molybdopterin-Guanine Dinucleotide Biosynthesis Protein; Molybdopterin-Guanine Dinucleotide Synthase; MobA-Related Protein; Purine Catabolism Protein PucB; Phosphoglycerate/Bisphosphoglycerate Mutase; Nucleotide-Diphospho-Sugar Transferase; Domain HDIG Containing Protein; HD Domain Protein; Regulatory Protein LysR; Molybdopterin Biosynthesis
Number of amino acids: Translated: 393; Mature: 393
Protein sequence:
>393_residues MDSNASGASEHVPESGKGTDMTHTSTTLILSAGFSSRMGDFKPLLPLGGMTVLERSVSLFRSAGVEDIRVVIGHRAEELQ PLLTHLGVRGILNPRYREGMFTSVVAGAETIADGRAPFFVIPVDIPLVRTATIRHLLEEYEEGRDDVLYPAFQGVRGHPP LIAARHAREIVKWRGNDGLRGALGQWEDGSRSIAVSDGHILNDMDTPEAYAGLLEKVTRYEIPTEAECMALLEMLLPADS PIIRHGRAVADLALTMAGRLNRHDYDLDTRLLEAAGLLHDLARAEADHAQAGARLLREAGFGAVAELVASHMDITPGTGV RITPHELLYLADKLVQGDRRVTLSERFRVALERHGHDPAILKNVTNRLHAALSIQTRLEATLGCPMAEVISRQ
Sequences:
>Translated_393_residues MDSNASGASEHVPESGKGTDMTHTSTTLILSAGFSSRMGDFKPLLPLGGMTVLERSVSLFRSAGVEDIRVVIGHRAEELQ PLLTHLGVRGILNPRYREGMFTSVVAGAETIADGRAPFFVIPVDIPLVRTATIRHLLEEYEEGRDDVLYPAFQGVRGHPP LIAARHAREIVKWRGNDGLRGALGQWEDGSRSIAVSDGHILNDMDTPEAYAGLLEKVTRYEIPTEAECMALLEMLLPADS PIIRHGRAVADLALTMAGRLNRHDYDLDTRLLEAAGLLHDLARAEADHAQAGARLLREAGFGAVAELVASHMDITPGTGV RITPHELLYLADKLVQGDRRVTLSERFRVALERHGHDPAILKNVTNRLHAALSIQTRLEATLGCPMAEVISRQ >Mature_393_residues MDSNASGASEHVPESGKGTDMTHTSTTLILSAGFSSRMGDFKPLLPLGGMTVLERSVSLFRSAGVEDIRVVIGHRAEELQ PLLTHLGVRGILNPRYREGMFTSVVAGAETIADGRAPFFVIPVDIPLVRTATIRHLLEEYEEGRDDVLYPAFQGVRGHPP LIAARHAREIVKWRGNDGLRGALGQWEDGSRSIAVSDGHILNDMDTPEAYAGLLEKVTRYEIPTEAECMALLEMLLPADS PIIRHGRAVADLALTMAGRLNRHDYDLDTRLLEAAGLLHDLARAEADHAQAGARLLREAGFGAVAELVASHMDITPGTGV RITPHELLYLADKLVQGDRRVTLSERFRVALERHGHDPAILKNVTNRLHAALSIQTRLEATLGCPMAEVISRQ
Specific function: Unknown
COG id: COG2068
COG function: function code R; Uncharacterized MobA-related protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789242, Length=195, Percent_Identity=27.6923076923077, Blast_Score=65, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42855; Mature: 42855
Theoretical pI: Translated: 6.27; Mature: 6.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDSNASGASEHVPESGKGTDMTHTSTTLILSAGFSSRMGDFKPLLPLGGMTVLERSVSLF CCCCCCCCHHCCCCCCCCCCCCCCCEEEEEECCCHHCCCCCCCCCCCCCHHHHHHHHHHH RSAGVEDIRVVIGHRAEELQPLLTHLGVRGILNPRYREGMFTSVVAGAETIADGRAPFFV HHCCHHHHHHHHCCCHHHHHHHHHHHCHHHCCCCHHHHCHHHHHHHHHHHHCCCCCCEEE IPVDIPLVRTATIRHLLEEYEEGRDDVLYPAFQGVRGHPPLIAARHAREIVKWRGNDGLR EECCCCHHHHHHHHHHHHHHHCCCCCEEHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCC GALGQWEDGSRSIAVSDGHILNDMDTPEAYAGLLEKVTRYEIPTEAECMALLEMLLPADS CCCCCCCCCCCEEEECCCCEECCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCC PIIRHGRAVADLALTMAGRLNRHDYDLDTRLLEAAGLLHDLARAEADHAQAGARLLREAG CHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC FGAVAELVASHMDITPGTGVRITPHELLYLADKLVQGDRRVTLSERFRVALERHGHDPAI CHHHHHHHHHHCCCCCCCCCEECHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHCCCCHHH LKNVTNRLHAALSIQTRLEATLGCPMAEVISRQ HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCC >Mature Secondary Structure MDSNASGASEHVPESGKGTDMTHTSTTLILSAGFSSRMGDFKPLLPLGGMTVLERSVSLF CCCCCCCCHHCCCCCCCCCCCCCCCEEEEEECCCHHCCCCCCCCCCCCCHHHHHHHHHHH RSAGVEDIRVVIGHRAEELQPLLTHLGVRGILNPRYREGMFTSVVAGAETIADGRAPFFV HHCCHHHHHHHHCCCHHHHHHHHHHHCHHHCCCCHHHHCHHHHHHHHHHHHCCCCCCEEE IPVDIPLVRTATIRHLLEEYEEGRDDVLYPAFQGVRGHPPLIAARHAREIVKWRGNDGLR EECCCCHHHHHHHHHHHHHHHCCCCCEEHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCC GALGQWEDGSRSIAVSDGHILNDMDTPEAYAGLLEKVTRYEIPTEAECMALLEMLLPADS CCCCCCCCCCCEEEECCCCEECCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCC PIIRHGRAVADLALTMAGRLNRHDYDLDTRLLEAAGLLHDLARAEADHAQAGARLLREAG CHHHCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC FGAVAELVASHMDITPGTGVRITPHELLYLADKLVQGDRRVTLSERFRVALERHGHDPAI CHHHHHHHHHHCCCCCCCCCEECHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHCCCCHHH LKNVTNRLHAALSIQTRLEATLGCPMAEVISRQ HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA