Click here to switch to the map view.

The map label for this gene is hmeC [H]

Identifier: 118579958

GI number: 118579958

Start: 1638644

End: 1639432

Strand: Reverse

Name: hmeC [H]

Synonym: Ppro_1535

Alternate gene names: 118579958

Gene position: 1639432-1638644 (Counterclockwise)

Preceding gene: 118579959

Following gene: 118579957

Centisome position: 40.9

GC content: 66.29

Gene sequence:

>789_bases
ATGGAGCACATCTTCTACGGCATACTTCCCCTCGCGGCTGTTACGCTGTTCTTCTGCGCCAGCATCCTCCGCATCGCGGC
CTGGCTCTGGCGGCCGGTCCCCTACCAGCTGACCCTCTTCCCGGTCTCGACGAAGCGGCGCGGGAAGCTGGCGCTGGCGG
CCGGAGAGCTGTTCCTGTTCAGGACGCTCTTTCGCGAGAACAGGCTGCTCTGGTTCCTGGCTTGGCTGCTGCACCTCTCC
CTGGCCATGATCCTCGCCGGGCACGTCCTGGGAATCTCCCTCCTGCGCGGCCAGTTCACCGCTCTGGGCGCTTCCCTGGA
GACCAGCGCACTCATCTCCAGGACGCTGGGCGGAGTGGCCGGAGCAGTCATGGTTTCCTCGCTGGTCGCCCTCTTCTGCC
GTCGCCTGCTGGACCGGGAACTGCGCAGGCTCTCCGAGCCTCTGGTCTGGTTCGACCTGCTGCTCCTGCTCTCCGTCGCC
TCAAGCGGGCTCGGCATGTATCTGCCCGGCTTCCACCCTGACCTCCCGGCCGTCAGGTCCTGGATTGCATCACTCTTCCG
CTTCGATTCCGTGCCGCCCCCCCCCAACCCGCTGTTCACGCTCCACCTTTCACTGGCAGGCTTCCTGCTGGTCTATTTCC
CCTTCTCGCAGCTGATGCACGCGGCGGGCGCCCTGGTCAACCGGGCCATGCTGATGGAGGCGGCCCCCACCTTCCCCACG
CCGAAGGACAAACACCCCCGCTCCCCCTTTGCCGAAAAACGCGCACCCGGGGAGGAGTCCCGGCAATGA

Upstream 100 bases:

>100_bases
GAGGCGCTTTTCTCCTGCAAGACCGCCAGGACAGCCTGCAAGGTGGCGGGACTGCCCAAACCGGCGGGGTGCCTGTAGCC
GGACGACGGACGGAGTGTCC

Downstream 100 bases:

>100_bases
AGATTCCAATGCTTCTGGCCACAGCGGATGAGATGCGGAAGATCGGCATCACGCCGGTCCCCGAGGGAAAACGGGTAAGC
GCCGCTCTGCAGCTGCTGGA

Product: nitrate reductase subunit gamma

Products: nitrate; reduced acceptor

Alternate protein names: Hme subunit C [H]

Number of amino acids: Translated: 262; Mature: 262

Protein sequence:

>262_residues
MEHIFYGILPLAAVTLFFCASILRIAAWLWRPVPYQLTLFPVSTKRRGKLALAAGELFLFRTLFRENRLLWFLAWLLHLS
LAMILAGHVLGISLLRGQFTALGASLETSALISRTLGGVAGAVMVSSLVALFCRRLLDRELRRLSEPLVWFDLLLLLSVA
SSGLGMYLPGFHPDLPAVRSWIASLFRFDSVPPPPNPLFTLHLSLAGFLLVYFPFSQLMHAAGALVNRAMLMEAAPTFPT
PKDKHPRSPFAEKRAPGEESRQ

Sequences:

>Translated_262_residues
MEHIFYGILPLAAVTLFFCASILRIAAWLWRPVPYQLTLFPVSTKRRGKLALAAGELFLFRTLFRENRLLWFLAWLLHLS
LAMILAGHVLGISLLRGQFTALGASLETSALISRTLGGVAGAVMVSSLVALFCRRLLDRELRRLSEPLVWFDLLLLLSVA
SSGLGMYLPGFHPDLPAVRSWIASLFRFDSVPPPPNPLFTLHLSLAGFLLVYFPFSQLMHAAGALVNRAMLMEAAPTFPT
PKDKHPRSPFAEKRAPGEESRQ
>Mature_262_residues
MEHIFYGILPLAAVTLFFCASILRIAAWLWRPVPYQLTLFPVSTKRRGKLALAAGELFLFRTLFRENRLLWFLAWLLHLS
LAMILAGHVLGISLLRGQFTALGASLETSALISRTLGGVAGAVMVSSLVALFCRRLLDRELRRLSEPLVWFDLLLLLSVA
SSGLGMYLPGFHPDLPAVRSWIASLFRFDSVPPPPNPLFTLHLSLAGFLLVYFPFSQLMHAAGALVNRAMLMEAAPTFPT
PKDKHPRSPFAEKRAPGEESRQ

Specific function: Has menaquinol-oxidizing activity. HmeC and hmeD subunits may together mediate electron transfer from menaquinol to an unidentified electron acceptor on the cytoplasmic side of the membrane [H]

COG id: COG2181

COG function: function code C; Nitrate reductase gamma subunit

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003816 [H]

Pfam domain/function: PF02665 Nitrate_red_gam [H]

EC number: 1.7.99.4

Molecular weight: Translated: 29149; Mature: 29149

Theoretical pI: Translated: 10.96; Mature: 10.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEHIFYGILPLAAVTLFFCASILRIAAWLWRPVPYQLTLFPVSTKRRGKLALAAGELFLF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEHHHHHHHHH
RTLFRENRLLWFLAWLLHLSLAMILAGHVLGISLLRGQFTALGASLETSALISRTLGGVA
HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
GAVMVSSLVALFCRRLLDRELRRLSEPLVWFDLLLLLSVASSGLGMYLPGFHPDLPAVRS
HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH
WIASLFRFDSVPPPPNPLFTLHLSLAGFLLVYFPFSQLMHAAGALVNRAMLMEAAPTFPT
HHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PKDKHPRSPFAEKRAPGEESRQ
CCCCCCCCCCHHHCCCCCCCCC
>Mature Secondary Structure
MEHIFYGILPLAAVTLFFCASILRIAAWLWRPVPYQLTLFPVSTKRRGKLALAAGELFLF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEHHHHHHHHH
RTLFRENRLLWFLAWLLHLSLAMILAGHVLGISLLRGQFTALGASLETSALISRTLGGVA
HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
GAVMVSSLVALFCRRLLDRELRRLSEPLVWFDLLLLLSVASSGLGMYLPGFHPDLPAVRS
HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH
WIASLFRFDSVPPPPNPLFTLHLSLAGFLLVYFPFSQLMHAAGALVNRAMLMEAAPTFPT
HHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PKDKHPRSPFAEKRAPGEESRQ
CCCCCCCCCCHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: nitrite; acceptor

Specific reaction: nitrite + acceptor = nitrate + reduced acceptor

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9389475; 11952791 [H]