| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
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The map label for this gene is glnD [H]
Identifier: 118579771
GI number: 118579771
Start: 1423239
End: 1425956
Strand: Direct
Name: glnD [H]
Synonym: Ppro_1343
Alternate gene names: 118579771
Gene position: 1423239-1425956 (Clockwise)
Preceding gene: 118579768
Following gene: 118579773
Centisome position: 35.51
GC content: 59.23
Gene sequence:
>2718_bases ATGCACTTTTCCATTGATTCCTATTTTCCCGACGACATTCACGAGGTGGGCGATACCGGCATGGCCGGTTTCGAGGAGAA ACGACCGCTCTATTTTTCGGGCAGCAAGAATTTTCTTTCCCATTACCGCGAAGAGATCAGGAAACGGCACAATGCCGGCG CATCGGGCAGCGAGGTGACACATCTGATCAGCCGCATGATGGATGAGCTGATCAAGCGGCTGTTCCATTCCATCGTCGAT GACCTGGACATCAGCGGCGGCTACATGGATCATATCAACCTGGTGGCGGTGGGGGGCTATGGCCGTGGCGAGTTGAATCC CTATTCCGACATCGATATCATGTTCCTTCACGATGGCGACATTCCGGTGGCAACGGTGGAGGATATCGCCCAGAAGCTGC TCTACTTCCTCTGGGACATGCGGCTGGATGTGGGCTATTCGGTACGCACCATCGGCGACTGCATCGAGATGGCAGCCAGC GACGGGACGGTCAAGACCGCCCTGATGGATGCCCGCAACCTGAAGGGAAGCACGTCGCTCTTCACTGATCTGCACAAGAC GATTTTCAGCCAGATCCTGCCCCGCTCCAGCGACAAATTCATCAAGTCCAAGGTCGAGGAGATGAAGGCCCGCCGGGAAA AGTACGGTTCCACCGTCTACCTGCTGGAGCCCAACCTGAAAGAGGGGGAGGGGGGGCTGCGCGACCTGCAGACCGCCCTC TGGGTGGCGCGTATCAAGTACAAGTTCAGTGATCCCCGGGAGCTGATCGTCAAGGGTGTCGTCACCGAGGAGGAGCTGGA CAGTTACTTCAGCGCCCTGGATTTTCTCTGGCGCATCCGCAACGAACTGCACTACTTCAGCGGGCGCAAGAACGAGCAGC TGACCTTCGATGCCCAGGTGCATCTGGCGCAGTTCTTCGGATATAAGCAGCATGAACGGGTCCTGGCGGTGGAGGACTTC ATGCGCGACTACTACCGCCATGCCAACCGGGTGGAATACCTGGTCTCCACCCTGGTGTCTCGCTGCGTCTGGCGCGACGA GGGGGCGCTTAAGATTCTGGGCTATTTCGTGCGCCGTCCCATCGGCGACGGCTGCTTCATCCTCAAGGGGGAGCTGATCG TTCCCGACGAGGGGGTGGTGGAACGCCAGCCGGTGGTGCTGATGCGCATTTTCGAGCTTGCCCAGAAGCATGGCGTCGAG CTGGGTATTCCGGTCATGGGACTGGTGCGCAGGAGCCTGCATATGGTTAATGACAAGTTCCGGCGCAGCCGCGAGGTGGG CACGTCGTTCATGAACATCCTGCGGGCCCCCCGGGGTGTGGCCAGGACGCTGCGCCTGATGCACCACCTGGAGTTTCTCA ATCACTTCATCCCCGAGATGGAACTGATCTACTGCAAGGTGCAGCACGATGTCTACCATATCTTTACCGTGGACATCCAT ACGCTGTTCGCCGTGGAACAGGCCGAGAAAATGCTTGCGGGGGAACTGAAGAACGAACTGCGCTTCCCCTGTCAGGTGGC GGCCCAGGTCAACAAGCCGGAGCTGCTCTACCTGGCGGTGCTGCTGCATGACATCGGCAAGGGGAGTGGCGGCAGTCACG CCGACAAGGGAGCTGCCATGATACCCACCATCGCGCGGCGGCTGGGACTGTCCCGGGAGTGCAGCGAGCGGTTGGAGTTC CTGGTGCGGCGGCATCTCTATTTCGCCCATATCGCCCAGCGCCGCGACCTGGGCGACGAGAAGATGATCATTCAGTTCGC CCGGCACATGGAAACCAGTGAAAACCTGAAGATGCTCTATCTGCTGACCGTGGCCGACATCAGGGCAGTGGGGGTCGATG TCTGGACCACCTGGAAGGCGCTGCTCTTCCAGGAACTGTATGAACGTGCATTCGATGTGCTGGAGCGGGGCGACTTTCGC CTTGAGGCCAGCAGTGAACGGGTCAAGTCGGTCATGCGCAAGGTGGCGGGACTCCTTGGAAATGAATGTGCCCCCACTGC GGTTCAGGCGGAACTCAGGGCCATGCCCATGCGGCTTTTGCTCTCCCATGACCCCGATCAGATTGCCGGTCATATCCGCC TGTTGCTGGGGCTGGGGCTGGGGGGGGCTCCGGTCCTGACCCGGCTCGTTCACAACCGGGAGAGCGGCTATTCGGAGTTC ACCATCTGCACCCATGACATGCCGGGGCTCTTTTCGCGTATCACCGGCGTCATGGCGGCCAACGGAATCAATATCCTGGG GGCGCAGATCAACACCAGCAGAAACGGCAAGGTTCTGGATATCCTTCAGGTCAACTCGCCCAGGGGAAAGATCATCGGTG ACGAGAACTGCTGGAAGAAGGTGCGCGACGACACGGAACGGGTCCTTCTGGGCGAGGCCGACGTGGCGGCCATGGTGGAT AAGCGACAGCGCCCCTCGCAGCTCATGGTTCGTCCCGCGCCTCGCTTTCCCACGCGTATCGACTTCGACAACCAGGTCTC CGAAGGGTACACGGTCATAGATATCTACACCCACGACAAGGTCGGGTTGCTCTACCTGATCACCAGCACGCTGACCCAGT TGGGGCTCTACATCGGTGTCTCCAAGATATCAACCAAGGTGGATCAGGTTGCCGACGTGTTTTATGTGCGCGATATCTTT GGGCATAAGATTATGGACGAGGCAAAGCTGGAAAGCGTCAGGGAACGTCTCAAATCTGCCATTGACGGGTGGGTGTGA
Upstream 100 bases:
>100_bases GTCCACTGATGGGTATGCTTCATGCATTCAAAAAACGGTTGCCATGACGGGACGATTCATAGCATACATAACAAACCGCA GCCCAGACAGGGGAGATGAC
Downstream 100 bases:
>100_bases GAGGAAAATGAAAGGCACATGAAAAGCCCGCCAAAATTGTTCGGCGGGCTTCTGCGTTTTTACTTCTGATTTTTCCTTTT CAAGGAATCAGTCCGGCTCC
Product: UTP-GlnB uridylyltransferase GlnD
Products: NA
Alternate protein names: PII uridylyl-transferase; UTase; Uridylyl-removing enzyme [H]
Number of amino acids: Translated: 905; Mature: 905
Protein sequence:
>905_residues MHFSIDSYFPDDIHEVGDTGMAGFEEKRPLYFSGSKNFLSHYREEIRKRHNAGASGSEVTHLISRMMDELIKRLFHSIVD DLDISGGYMDHINLVAVGGYGRGELNPYSDIDIMFLHDGDIPVATVEDIAQKLLYFLWDMRLDVGYSVRTIGDCIEMAAS DGTVKTALMDARNLKGSTSLFTDLHKTIFSQILPRSSDKFIKSKVEEMKARREKYGSTVYLLEPNLKEGEGGLRDLQTAL WVARIKYKFSDPRELIVKGVVTEEELDSYFSALDFLWRIRNELHYFSGRKNEQLTFDAQVHLAQFFGYKQHERVLAVEDF MRDYYRHANRVEYLVSTLVSRCVWRDEGALKILGYFVRRPIGDGCFILKGELIVPDEGVVERQPVVLMRIFELAQKHGVE LGIPVMGLVRRSLHMVNDKFRRSREVGTSFMNILRAPRGVARTLRLMHHLEFLNHFIPEMELIYCKVQHDVYHIFTVDIH TLFAVEQAEKMLAGELKNELRFPCQVAAQVNKPELLYLAVLLHDIGKGSGGSHADKGAAMIPTIARRLGLSRECSERLEF LVRRHLYFAHIAQRRDLGDEKMIIQFARHMETSENLKMLYLLTVADIRAVGVDVWTTWKALLFQELYERAFDVLERGDFR LEASSERVKSVMRKVAGLLGNECAPTAVQAELRAMPMRLLLSHDPDQIAGHIRLLLGLGLGGAPVLTRLVHNRESGYSEF TICTHDMPGLFSRITGVMAANGINILGAQINTSRNGKVLDILQVNSPRGKIIGDENCWKKVRDDTERVLLGEADVAAMVD KRQRPSQLMVRPAPRFPTRIDFDNQVSEGYTVIDIYTHDKVGLLYLITSTLTQLGLYIGVSKISTKVDQVADVFYVRDIF GHKIMDEAKLESVRERLKSAIDGWV
Sequences:
>Translated_905_residues MHFSIDSYFPDDIHEVGDTGMAGFEEKRPLYFSGSKNFLSHYREEIRKRHNAGASGSEVTHLISRMMDELIKRLFHSIVD DLDISGGYMDHINLVAVGGYGRGELNPYSDIDIMFLHDGDIPVATVEDIAQKLLYFLWDMRLDVGYSVRTIGDCIEMAAS DGTVKTALMDARNLKGSTSLFTDLHKTIFSQILPRSSDKFIKSKVEEMKARREKYGSTVYLLEPNLKEGEGGLRDLQTAL WVARIKYKFSDPRELIVKGVVTEEELDSYFSALDFLWRIRNELHYFSGRKNEQLTFDAQVHLAQFFGYKQHERVLAVEDF MRDYYRHANRVEYLVSTLVSRCVWRDEGALKILGYFVRRPIGDGCFILKGELIVPDEGVVERQPVVLMRIFELAQKHGVE LGIPVMGLVRRSLHMVNDKFRRSREVGTSFMNILRAPRGVARTLRLMHHLEFLNHFIPEMELIYCKVQHDVYHIFTVDIH TLFAVEQAEKMLAGELKNELRFPCQVAAQVNKPELLYLAVLLHDIGKGSGGSHADKGAAMIPTIARRLGLSRECSERLEF LVRRHLYFAHIAQRRDLGDEKMIIQFARHMETSENLKMLYLLTVADIRAVGVDVWTTWKALLFQELYERAFDVLERGDFR LEASSERVKSVMRKVAGLLGNECAPTAVQAELRAMPMRLLLSHDPDQIAGHIRLLLGLGLGGAPVLTRLVHNRESGYSEF TICTHDMPGLFSRITGVMAANGINILGAQINTSRNGKVLDILQVNSPRGKIIGDENCWKKVRDDTERVLLGEADVAAMVD KRQRPSQLMVRPAPRFPTRIDFDNQVSEGYTVIDIYTHDKVGLLYLITSTLTQLGLYIGVSKISTKVDQVADVFYVRDIF GHKIMDEAKLESVRERLKSAIDGWV >Mature_905_residues MHFSIDSYFPDDIHEVGDTGMAGFEEKRPLYFSGSKNFLSHYREEIRKRHNAGASGSEVTHLISRMMDELIKRLFHSIVD DLDISGGYMDHINLVAVGGYGRGELNPYSDIDIMFLHDGDIPVATVEDIAQKLLYFLWDMRLDVGYSVRTIGDCIEMAAS DGTVKTALMDARNLKGSTSLFTDLHKTIFSQILPRSSDKFIKSKVEEMKARREKYGSTVYLLEPNLKEGEGGLRDLQTAL WVARIKYKFSDPRELIVKGVVTEEELDSYFSALDFLWRIRNELHYFSGRKNEQLTFDAQVHLAQFFGYKQHERVLAVEDF MRDYYRHANRVEYLVSTLVSRCVWRDEGALKILGYFVRRPIGDGCFILKGELIVPDEGVVERQPVVLMRIFELAQKHGVE LGIPVMGLVRRSLHMVNDKFRRSREVGTSFMNILRAPRGVARTLRLMHHLEFLNHFIPEMELIYCKVQHDVYHIFTVDIH TLFAVEQAEKMLAGELKNELRFPCQVAAQVNKPELLYLAVLLHDIGKGSGGSHADKGAAMIPTIARRLGLSRECSERLEF LVRRHLYFAHIAQRRDLGDEKMIIQFARHMETSENLKMLYLLTVADIRAVGVDVWTTWKALLFQELYERAFDVLERGDFR LEASSERVKSVMRKVAGLLGNECAPTAVQAELRAMPMRLLLSHDPDQIAGHIRLLLGLGLGGAPVLTRLVHNRESGYSEF TICTHDMPGLFSRITGVMAANGINILGAQINTSRNGKVLDILQVNSPRGKIIGDENCWKKVRDDTERVLLGEADVAAMVD KRQRPSQLMVRPAPRFPTRIDFDNQVSEGYTVIDIYTHDKVGLLYLITSTLTQLGLYIGVSKISTKVDQVADVFYVRDIF GHKIMDEAKLESVRERLKSAIDGWV
Specific function: Modifies, by uridylylation or deuridylylation the PII (glnB) regulatory protein [H]
COG id: COG2844
COG function: function code O; UTP:GlnB (protein PII) uridylyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glnD family [H]
Homologues:
Organism=Escherichia coli, GI1786363, Length=890, Percent_Identity=32.0224719101124, Blast_Score=374, Evalue=1e-104,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002912 - InterPro: IPR010043 - InterPro: IPR003607 - InterPro: IPR002934 - InterPro: IPR013546 [H]
Pfam domain/function: PF01842 ACT; PF08335 GlnD_UR_UTase; PF01909 NTP_transf_2 [H]
EC number: =2.7.7.59 [H]
Molecular weight: Translated: 103068; Mature: 103068
Theoretical pI: Translated: 7.19; Mature: 7.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHFSIDSYFPDDIHEVGDTGMAGFEEKRPLYFSGSKNFLSHYREEIRKRHNAGASGSEVT CCCCCCCCCCHHHHHHCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHCCCCCHHHHH HLISRMMDELIKRLFHSIVDDLDISGGYMDHINLVAVGGYGRGELNPYSDIDIMFLHDGD HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEEECCC IPVATVEDIAQKLLYFLWDMRLDVGYSVRTIGDCIEMAASDGTVKTALMDARNLKGSTSL CCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHH FTDLHKTIFSQILPRSSDKFIKSKVEEMKARREKYGSTVYLLEPNLKEGEGGLRDLQTAL HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCHHHHHHHHH WVARIKYKFSDPRELIVKGVVTEEELDSYFSALDFLWRIRNELHYFSGRKNEQLTFDAQV HHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHH HLAQFFGYKQHERVLAVEDFMRDYYRHANRVEYLVSTLVSRCVWRDEGALKILGYFVRRP HHHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCC IGDGCFILKGELIVPDEGVVERQPVVLMRIFELAQKHGVELGIPVMGLVRRSLHMVNDKF CCCCEEEEECCEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH RRSREVGTSFMNILRAPRGVARTLRLMHHLEFLNHFIPEMELIYCKVQHDVYHIFTVDIH HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCEEEEEEEHHH TLFAVEQAEKMLAGELKNELRFPCQVAAQVNKPELLYLAVLLHDIGKGSGGSHADKGAAM HHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHH IPTIARRLGLSRECSERLEFLVRRHLYFAHIAQRRDLGDEKMIIQFARHMETSENLKMLY HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEE LLTVADIRAVGVDVWTTWKALLFQELYERAFDVLERGDFRLEASSERVKSVMRKVAGLLG EEEHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHC NECAPTAVQAELRAMPMRLLLSHDPDQIAGHIRLLLGLGLGGAPVLTRLVHNRESGYSEF CCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCEE TICTHDMPGLFSRITGVMAANGINILGAQINTSRNGKVLDILQVNSPRGKIIGDENCWKK EEEECCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCCEEEEEEECCCCCCEECCHHHHHH VRDDTERVLLGEADVAAMVDKRQRPSQLMVRPAPRFPTRIDFDNQVSEGYTVIDIYTHDK HHCCHHHEEECCCHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCCCCCCEEEEEEEECCC VGLLYLITSTLTQLGLYIGVSKISTKVDQVADVFYVRDIFGHKIMDEAKLESVRERLKSA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IDGWV HCCCC >Mature Secondary Structure MHFSIDSYFPDDIHEVGDTGMAGFEEKRPLYFSGSKNFLSHYREEIRKRHNAGASGSEVT CCCCCCCCCCHHHHHHCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHCCCCCHHHHH HLISRMMDELIKRLFHSIVDDLDISGGYMDHINLVAVGGYGRGELNPYSDIDIMFLHDGD HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEEECCC IPVATVEDIAQKLLYFLWDMRLDVGYSVRTIGDCIEMAASDGTVKTALMDARNLKGSTSL CCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHH FTDLHKTIFSQILPRSSDKFIKSKVEEMKARREKYGSTVYLLEPNLKEGEGGLRDLQTAL HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCHHHHHHHHH WVARIKYKFSDPRELIVKGVVTEEELDSYFSALDFLWRIRNELHYFSGRKNEQLTFDAQV HHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHH HLAQFFGYKQHERVLAVEDFMRDYYRHANRVEYLVSTLVSRCVWRDEGALKILGYFVRRP HHHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCC IGDGCFILKGELIVPDEGVVERQPVVLMRIFELAQKHGVELGIPVMGLVRRSLHMVNDKF CCCCEEEEECCEECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH RRSREVGTSFMNILRAPRGVARTLRLMHHLEFLNHFIPEMELIYCKVQHDVYHIFTVDIH HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCEEEEEEEHHH TLFAVEQAEKMLAGELKNELRFPCQVAAQVNKPELLYLAVLLHDIGKGSGGSHADKGAAM HHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHH IPTIARRLGLSRECSERLEFLVRRHLYFAHIAQRRDLGDEKMIIQFARHMETSENLKMLY HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEE LLTVADIRAVGVDVWTTWKALLFQELYERAFDVLERGDFRLEASSERVKSVMRKVAGLLG EEEHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHC NECAPTAVQAELRAMPMRLLLSHDPDQIAGHIRLLLGLGLGGAPVLTRLVHNRESGYSEF CCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCEE TICTHDMPGLFSRITGVMAANGINILGAQINTSRNGKVLDILQVNSPRGKIIGDENCWKK EEEECCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCCEEEEEEECCCCCCEECCHHHHHH VRDDTERVLLGEADVAAMVDKRQRPSQLMVRPAPRFPTRIDFDNQVSEGYTVIDIYTHDK HHCCHHHEEECCCHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCCCCCCEEEEEEEECCC VGLLYLITSTLTQLGLYIGVSKISTKVDQVADVFYVRDIFGHKIMDEAKLESVRERLKSA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IDGWV HCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA