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The map label for this gene is ychE [C]

Identifier: 118579762

GI number: 118579762

Start: 1409724

End: 1410332

Strand: Reverse

Name: ychE [C]

Synonym: Ppro_1334

Alternate gene names: 118579762

Gene position: 1410332-1409724 (Counterclockwise)

Preceding gene: 118579763

Following gene: 118579761

Centisome position: 35.19

GC content: 61.25

Gene sequence:

>609_bases
ATGCAGATCTACGGCAGCTTTTTTTTCGGCATCTGGATAAAGTTCTTCTTCCTGCTGACCCCCTTCTTCGTACTCTCCAC
ATTCCTCTCCATGACCCAGCGATATGAGGCCAGGGAACGGAGGAAGCTGGCCCTGCGGGTAACCGTCGCCGTGCTGGTGG
CCTGCTTCACGCTCTACTTCTTCGGCAACACCCTCTTCTCCCTGTTCGGCATAACCCTGGACTCATTCCGCATCGGCGCG
GGGGCGCTTTTGTTCCTCTCGGCGGTGCAACTGGTGTACGGTGACGACAAGGCCCCGCCGGGGGGAGAACGGGAGGTCAT
CTCGGTTGTCCCCCTCGCCATTCCAATCACCGTGGGGCCGGGCACCACCGGAGCCCTGTTGGTCATGGGAGCGGAGATTC
AACAGAGCTGGGAGATCCTGGTGGGCTGCGCGGCCCTGGCAACCGCCGTGCTCTGCATCGGCCTGCTGCTCTTCTGCGCC
GCCTCCATCGAGCACCTGATCGGCAAGCGGGGGATCATCATCCTGAGCAAGATCACCGGCCTGTTTGTCGCCGCCCTGGC
AGCCCAGATCGTCTTCACCGGAATACGCAATTTCATGACAGCCGGATGA

Upstream 100 bases:

>100_bases
AAACAGGAATGCACCTGGAAGCAGCTGGAACTCGGCCTCTGAAGAGTCACACGTCCGTTTTCGTCCTTCCCCTTCCCCGC
CCGTCCGAGGATCCGACCAC

Downstream 100 bases:

>100_bases
ATCAGAACGCCATGGCAAAGGTTGACAGATTCGAAAAAATCAGCTAATGCTAGTCTTCCGTTTCCCAGCCGGTTTTATGG
CCAGAGACCGACAAAAGCAA

Product: multiple antibiotic resistance (MarC)-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 202; Mature: 202

Protein sequence:

>202_residues
MQIYGSFFFGIWIKFFFLLTPFFVLSTFLSMTQRYEARERRKLALRVTVAVLVACFTLYFFGNTLFSLFGITLDSFRIGA
GALLFLSAVQLVYGDDKAPPGGEREVISVVPLAIPITVGPGTTGALLVMGAEIQQSWEILVGCAALATAVLCIGLLLFCA
ASIEHLIGKRGIIILSKITGLFVAALAAQIVFTGIRNFMTAG

Sequences:

>Translated_202_residues
MQIYGSFFFGIWIKFFFLLTPFFVLSTFLSMTQRYEARERRKLALRVTVAVLVACFTLYFFGNTLFSLFGITLDSFRIGA
GALLFLSAVQLVYGDDKAPPGGEREVISVVPLAIPITVGPGTTGALLVMGAEIQQSWEILVGCAALATAVLCIGLLLFCA
ASIEHLIGKRGIIILSKITGLFVAALAAQIVFTGIRNFMTAG
>Mature_202_residues
MQIYGSFFFGIWIKFFFLLTPFFVLSTFLSMTQRYEARERRKLALRVTVAVLVACFTLYFFGNTLFSLFGITLDSFRIGA
GALLFLSAVQLVYGDDKAPPGGEREVISVVPLAIPITVGPGTTGALLVMGAEIQQSWEILVGCAALATAVLCIGLLLFCA
ASIEHLIGKRGIIILSKITGLFVAALAAQIVFTGIRNFMTAG

Specific function: Unknown

COG id: COG2095

COG function: function code U; Multiple antibiotic transporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0056 (marC) family [H]

Homologues:

Organism=Escherichia coli, GI1787494, Length=202, Percent_Identity=31.6831683168317, Blast_Score=94, Evalue=9e-21,
Organism=Escherichia coli, GI1789842, Length=193, Percent_Identity=26.4248704663212, Blast_Score=71, Evalue=4e-14,
Organism=Escherichia coli, GI1787809, Length=195, Percent_Identity=25.1282051282051, Blast_Score=64, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002771 [H]

Pfam domain/function: PF01914 MarC [H]

EC number: NA

Molecular weight: Translated: 21832; Mature: 21832

Theoretical pI: Translated: 8.96; Mature: 8.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQIYGSFFFGIWIKFFFLLTPFFVLSTFLSMTQRYEARERRKLALRVTVAVLVACFTLYF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FGNTLFSLFGITLDSFRIGAGALLFLSAVQLVYGDDKAPPGGEREVISVVPLAIPITVGP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHEEEHEEEEEEECC
GTTGALLVMGAEIQQSWEILVGCAALATAVLCIGLLLFCAASIEHLIGKRGIIILSKITG
CCCCHHHEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
LFVAALAAQIVFTGIRNFMTAG
HHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MQIYGSFFFGIWIKFFFLLTPFFVLSTFLSMTQRYEARERRKLALRVTVAVLVACFTLYF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FGNTLFSLFGITLDSFRIGAGALLFLSAVQLVYGDDKAPPGGEREVISVVPLAIPITVGP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHEEEHEEEEEEECC
GTTGALLVMGAEIQQSWEILVGCAALATAVLCIGLLLFCAASIEHLIGKRGIIILSKITG
CCCCHHHEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
LFVAALAAQIVFTGIRNFMTAG
HHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12089438 [H]