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The map label for this gene is intQ [C]

Identifier: 118579761

GI number: 118579761

Start: 1408298

End: 1409443

Strand: Reverse

Name: intQ [C]

Synonym: Ppro_1333

Alternate gene names: 118579761

Gene position: 1409443-1408298 (Counterclockwise)

Preceding gene: 118579762

Following gene: 118579756

Centisome position: 35.17

GC content: 49.3

Gene sequence:

>1146_bases
ATGTCTAAGCACCTCTTCACTCGTAACGGTAGGTATTACTTCCGTCAGTGGTTTCCCCTTGATCTCCGCCCCCTGTTTGG
CAATAAGACCGACATAGCCAAGTCGCTCAAGACCTCCAACAAGAAGGAAGCTCTGGCCCTCGCTGGTGGGCTTCAGCAGA
AATTCAGCGTTGCCTTCACATTGATCCGCACGGGCTTGCTCTCGCCTGAGATGCTTGATGGATTGATGGCATACACCCTA
CCCTGCAAGCATCACAAACCAGCTCCCCCCCACTCACCCGTTGTATCCCCCACTTCCCAAAGAGCTTCAGTAAAGCTCTC
TAAGCTCATTGATATGTACACAAAAGAGCACTCTCCGAACTGGACACCCAAGAGCCAACATGAAATTGACAGACAGCTAG
AACTTCTGATGATGGTTCTTGACAACAAACCTGTCTGCGACATTGATAGGGCATCTTGTGTAAGTTGTCGGGATATACTA
CGAAGGCTTCCTCCTGGTTTCATGAGAATCAACAGGTTCAAGAACCTCACTGTACCGGAACTGCTTAAGGTGAATACAGG
AAATGAAGGGATGCACCTCGCTACAGTAAACAAATATATGATCCTCCTTTCCTCGCTGCTCAAATGGGGAGCCAAACATG
GTCATACTGATAGTAATCCCGCTGAGGGTTTGACTCTTGGGAAAGATACCCGCACCGACGAGGAACGGAAGGCATACAGC
AACGATGACTTGCGGAAGGTTCTGGATCATTGCTCAGTTCAGGTTAAGCCATATAGACGATGGGTGCCTCTTATCGCTAT
GTACTCAGGGATGAGACTTGAAGAAATCTGCCAGCTCTCTACAGAGGACATAAGAACCATAGATGGGATTGTCTGCTTTG
ATGTTAACACGCAAGGAGATAAACGCCTGAAATCCAAGTCGTCAAAAAGGATTGTTCCCGTCCATCCTGACCTAATCAGC
ATGGGGTTGCTGGTGTATCTGGAGCAGAAGAGAGGCGCATCTCCTGCTGGGTGTAACCTGTGGGGGTTGTCAAAGGGCAG
ATGGGGATACGGGAAGAATGTTGGCAACTGGTACGGTAACAGCTTCAACAGGCAGTACATCACCGATGATCCGCTGAAGT
GCTTCCACTCCTTCCGACACTCCTGA

Upstream 100 bases:

>100_bases
ACAAACGGCTCCAGTTTAATTATTCCAATAGTTTAGTACTGTTAGAACAGAAAGACCCGTTTTTGTCACAGTTTTAGGAC
TGAGTGAAAGCGGGTTTTTT

Downstream 100 bases:

>100_bases
GAGTAAACACGATAATCGAGGGAGGTTCAGACTTGCTAATTGAGGGATCATTGCAGGCCCTGACCTGACGATCATGGATG
CTGGATGGGCGGCGGTTGAG

Product: hypothetical protein

Products: NA

Alternate protein names: Integrase; Phage Integrase; Phage Integrase Family Protein; Phage-Related Integrase; Phage Integrase Family Site Specific Recombinase; Site-Specific Recombinase Phage Integrase Family; Site-Specific Recombinase; Phage Integerase; Integrase/Resolvase Recombinase Protein; Site-Specific Recombinase Phage Integrase Family Protein; Integrase Domain-Containing Protein; Integrase Domain Protein SAM Domain Protein; Phage Integrase Family Recombinase Protein; Prolidase (Xaa-Pro Dipeptidase

Number of amino acids: Translated: 381; Mature: 380

Protein sequence:

>381_residues
MSKHLFTRNGRYYFRQWFPLDLRPLFGNKTDIAKSLKTSNKKEALALAGGLQQKFSVAFTLIRTGLLSPEMLDGLMAYTL
PCKHHKPAPPHSPVVSPTSQRASVKLSKLIDMYTKEHSPNWTPKSQHEIDRQLELLMMVLDNKPVCDIDRASCVSCRDIL
RRLPPGFMRINRFKNLTVPELLKVNTGNEGMHLATVNKYMILLSSLLKWGAKHGHTDSNPAEGLTLGKDTRTDEERKAYS
NDDLRKVLDHCSVQVKPYRRWVPLIAMYSGMRLEEICQLSTEDIRTIDGIVCFDVNTQGDKRLKSKSSKRIVPVHPDLIS
MGLLVYLEQKRGASPAGCNLWGLSKGRWGYGKNVGNWYGNSFNRQYITDDPLKCFHSFRHS

Sequences:

>Translated_381_residues
MSKHLFTRNGRYYFRQWFPLDLRPLFGNKTDIAKSLKTSNKKEALALAGGLQQKFSVAFTLIRTGLLSPEMLDGLMAYTL
PCKHHKPAPPHSPVVSPTSQRASVKLSKLIDMYTKEHSPNWTPKSQHEIDRQLELLMMVLDNKPVCDIDRASCVSCRDIL
RRLPPGFMRINRFKNLTVPELLKVNTGNEGMHLATVNKYMILLSSLLKWGAKHGHTDSNPAEGLTLGKDTRTDEERKAYS
NDDLRKVLDHCSVQVKPYRRWVPLIAMYSGMRLEEICQLSTEDIRTIDGIVCFDVNTQGDKRLKSKSSKRIVPVHPDLIS
MGLLVYLEQKRGASPAGCNLWGLSKGRWGYGKNVGNWYGNSFNRQYITDDPLKCFHSFRHS
>Mature_380_residues
SKHLFTRNGRYYFRQWFPLDLRPLFGNKTDIAKSLKTSNKKEALALAGGLQQKFSVAFTLIRTGLLSPEMLDGLMAYTLP
CKHHKPAPPHSPVVSPTSQRASVKLSKLIDMYTKEHSPNWTPKSQHEIDRQLELLMMVLDNKPVCDIDRASCVSCRDILR
RLPPGFMRINRFKNLTVPELLKVNTGNEGMHLATVNKYMILLSSLLKWGAKHGHTDSNPAEGLTLGKDTRTDEERKAYSN
DDLRKVLDHCSVQVKPYRRWVPLIAMYSGMRLEEICQLSTEDIRTIDGIVCFDVNTQGDKRLKSKSSKRIVPVHPDLISM
GLLVYLEQKRGASPAGCNLWGLSKGRWGYGKNVGNWYGNSFNRQYITDDPLKCFHSFRHS

Specific function: Integrase Is Necessary For Integration Of The Phage Into The Host Genome By Site-Specific Recombination. In Conjunction With Excisionase, Integrase Is Also Necessary For Excision Of The Prophage From The Host Genome (By Similarity). [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43389; Mature: 43258

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKHLFTRNGRYYFRQWFPLDLRPLFGNKTDIAKSLKTSNKKEALALAGGLQQKFSVAFT
CCCCEEECCCCEEEEEECCCCCEECCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
LIRTGLLSPEMLDGLMAYTLPCKHHKPAPPHSPVVSPTSQRASVKLSKLIDMYTKEHSPN
HHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC
WTPKSQHEIDRQLELLMMVLDNKPVCDIDRASCVSCRDILRRLPPGFMRINRFKNLTVPE
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHH
LLKVNTGNEGMHLATVNKYMILLSSLLKWGAKHGHTDSNPAEGLTLGKDTRTDEERKAYS
HEEECCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHCC
NDDLRKVLDHCSVQVKPYRRWVPLIAMYSGMRLEEICQLSTEDIRTIDGIVCFDVNTQGD
CHHHHHHHHHCCEEEEHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHCCEEEEECCCCCH
KRLKSKSSKRIVPVHPDLISMGLLVYLEQKRGASPAGCNLWGLSKGRWGYGKNVGNWYGN
HHHHHCCCCCEEECCCHHHHHHHHHEEHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCC
SFNRQYITDDPLKCFHSFRHS
CCCCCCCCCCHHHHHHHHCCC
>Mature Secondary Structure 
SKHLFTRNGRYYFRQWFPLDLRPLFGNKTDIAKSLKTSNKKEALALAGGLQQKFSVAFT
CCCEEECCCCEEEEEECCCCCEECCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
LIRTGLLSPEMLDGLMAYTLPCKHHKPAPPHSPVVSPTSQRASVKLSKLIDMYTKEHSPN
HHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC
WTPKSQHEIDRQLELLMMVLDNKPVCDIDRASCVSCRDILRRLPPGFMRINRFKNLTVPE
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHH
LLKVNTGNEGMHLATVNKYMILLSSLLKWGAKHGHTDSNPAEGLTLGKDTRTDEERKAYS
HEEECCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHCC
NDDLRKVLDHCSVQVKPYRRWVPLIAMYSGMRLEEICQLSTEDIRTIDGIVCFDVNTQGD
CHHHHHHHHHCCEEEEHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHCCEEEEECCCCCH
KRLKSKSSKRIVPVHPDLISMGLLVYLEQKRGASPAGCNLWGLSKGRWGYGKNVGNWYGN
HHHHHCCCCCEEECCCHHHHHHHHHEEHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCC
SFNRQYITDDPLKCFHSFRHS
CCCCCCCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA