Click here to switch to the map view.

The map label for this gene is 118579600

Identifier: 118579600

GI number: 118579600

Start: 1219934

End: 1221598

Strand: Direct

Name: 118579600

Synonym: Ppro_1169

Alternate gene names: NA

Gene position: 1219934-1221598 (Clockwise)

Preceding gene: 118579587

Following gene: 118579601

Centisome position: 30.44

GC content: 64.14

Gene sequence:

>1665_bases
GTGAAGTCAGCCATGTTCCGTATCATGACCGTTATTGCGCTGCTGGCCTGTCTGCTCCCCGTGACAGCCCTGGCACGGGA
CAGCTCTGCCACGGTCGAGCTGACCGTGGTGAAGCGCGACACCCTGATTTCCATCTGCCGAACATACCTGCGGCAGCCGG
CGCGATGGCCTGAAATCGGCCGACTCAACCGGCTCGGGAACAACGATCTGATCAGGCCGGGACAGCGGCTGATCATACCC
GTGGAACTGCTTAAGGGGGTACCCCTTGACGGGTGGGTGGCGTTCGTCAGGTCGGAGGTCATGATCAGGGAGGCGCGCCG
GAAAGAGTGGAGAGCTCTCAGAAGCGGCGATCCTGTCCGGCAGGGGAGCCTGATCAGAACCGGCGGCGAGGGGGCAGTGG
AGATCGTCTTCGACGATGGCAGTTCCCTGTACCAACACCCTGACAGCACCCTGGATCTGAGCGCGTCCCAGCTGAAAGCC
GGCAATCACCTCTTCCGCAGGCTGTTTATCTCCGCGGGAAGGATCCTGGTCAAGGTGCGCAATGCCACGGGGCGGGACTC
GCGTATGGAGATCAGGACCCCTTCGGCCATGGCCGTGGCTCGGGGTACGGATTTTCGCGTTGCCGCCGATGCCCGGAAGG
CAACCACCGCGGAAGTCCTGCAGGGGGTCGTGCAGGTCGATGCCCTGTGCCGCACGGTCATGGTCAGGGAAGGGGAGGGA
ACCCTGGTCAGGAAGGGGGAGCCCCCCCTCCAGCCGCGCAAACTGCTGCCCCCACCCCGTCTGACCGAAGCGCCGCACCT
CTACCGCGGCACGCCGTTCAGGCTTTCATTCCAGCCGGTTGACGGCGCTGTTTCCCACCGTCTGCTGCTCTCGCGCGACC
GGGAGGGGCGGGACCTGGTCCGCGAACTGCTGTTCAGGGCGGGGGAAAGCCCGGAACTCTCCGGGCTTGAGGATGGAGTC
TATTACTGCCAGGCGCTGAGTATCGATGCCTACGGCCTGGAGGGCGCCTTTTCCGCTCCGGTGGCGGTTACCCTGCGCGC
CAATCCACTTTCCCCCTTTATCCAGGAACCGCATGACGGATCGACCTTCACGGGGGGAAGGGTCTCCTTTCGCTGGCTCA
AGGTTGGCGATGCTGCTTCCTACCAGCTGCAGATTTCGCCGGACTGCTCATTTGCCCCCTCGTCGGTCAGCCTGGTGGAT
GTGGCCGATACCTCCGTCCAACGCGAATTCAGCGACCTGGGCAAACAATGTTTCCGTATCCGTTCCATGGCCGTTGATGG
CTTTGCCGGAAACTGGTCTGATCCGCTTTCCTTTACCCTGCTCCCCCCGCCCCCCGCTCCCCCCCTGGAAAAACCGGACC
AACAGGGAAATAAACTCCACCTGCGCTGGCCAAGCCAGGGGGAGGGGGTCAGCTACCACGTGCAGCTTGCCGACAACGAA
CGCTTCGACTCTCCTCTTGTGGACCAGCGCCTGGCTGAGCCGGAGCTGAGCCTGGACGCTCCCCAACGGGGGGGCGTCTA
CTATGTGCGCACCAGCAGCATCGATCCCCAGGGGAACGAGGGGCCGTTCTCTCCGCCCCAGAGTTTCGAAGTCAGGCGCT
GGTGGCCGTTCGCGGCAGGAGGGGCGCTGGGCGCGGCGGGACTGATCCTGCTGCTGGTTCTCTAG

Upstream 100 bases:

>100_bases
CGTGGTCCCGTCGCCGCTGTTAGCTGTTGTAAAGTTGTTTTAAAAATGTATTATGTGTGGCGTGCAATATGTAGATTCAT
ACACAGAGGCCGGGAGAAGC

Downstream 100 bases:

>100_bases
CGCCTTCCCCCTTCCAGTGATCCCACACGAGAGGAGTGACGTGCGCTTTCTCAAGTCCTCCAACCATAGATACCTCCTGA
CACTTGCGGTCGGCTTTTTC

Product: peptidoglycan-binding LysM

Products: NA

Alternate protein names: LysM Domain-Containing Protein; LysM Cell Wall-Like Protein; LysM Domain-Containing; LysM Motif-Containing Protein; LysM Domain Protein

Number of amino acids: Translated: 554; Mature: 554

Protein sequence:

>554_residues
MKSAMFRIMTVIALLACLLPVTALARDSSATVELTVVKRDTLISICRTYLRQPARWPEIGRLNRLGNNDLIRPGQRLIIP
VELLKGVPLDGWVAFVRSEVMIREARRKEWRALRSGDPVRQGSLIRTGGEGAVEIVFDDGSSLYQHPDSTLDLSASQLKA
GNHLFRRLFISAGRILVKVRNATGRDSRMEIRTPSAMAVARGTDFRVAADARKATTAEVLQGVVQVDALCRTVMVREGEG
TLVRKGEPPLQPRKLLPPPRLTEAPHLYRGTPFRLSFQPVDGAVSHRLLLSRDREGRDLVRELLFRAGESPELSGLEDGV
YYCQALSIDAYGLEGAFSAPVAVTLRANPLSPFIQEPHDGSTFTGGRVSFRWLKVGDAASYQLQISPDCSFAPSSVSLVD
VADTSVQREFSDLGKQCFRIRSMAVDGFAGNWSDPLSFTLLPPPPAPPLEKPDQQGNKLHLRWPSQGEGVSYHVQLADNE
RFDSPLVDQRLAEPELSLDAPQRGGVYYVRTSSIDPQGNEGPFSPPQSFEVRRWWPFAAGGALGAAGLILLLVL

Sequences:

>Translated_554_residues
MKSAMFRIMTVIALLACLLPVTALARDSSATVELTVVKRDTLISICRTYLRQPARWPEIGRLNRLGNNDLIRPGQRLIIP
VELLKGVPLDGWVAFVRSEVMIREARRKEWRALRSGDPVRQGSLIRTGGEGAVEIVFDDGSSLYQHPDSTLDLSASQLKA
GNHLFRRLFISAGRILVKVRNATGRDSRMEIRTPSAMAVARGTDFRVAADARKATTAEVLQGVVQVDALCRTVMVREGEG
TLVRKGEPPLQPRKLLPPPRLTEAPHLYRGTPFRLSFQPVDGAVSHRLLLSRDREGRDLVRELLFRAGESPELSGLEDGV
YYCQALSIDAYGLEGAFSAPVAVTLRANPLSPFIQEPHDGSTFTGGRVSFRWLKVGDAASYQLQISPDCSFAPSSVSLVD
VADTSVQREFSDLGKQCFRIRSMAVDGFAGNWSDPLSFTLLPPPPAPPLEKPDQQGNKLHLRWPSQGEGVSYHVQLADNE
RFDSPLVDQRLAEPELSLDAPQRGGVYYVRTSSIDPQGNEGPFSPPQSFEVRRWWPFAAGGALGAAGLILLLVL
>Mature_554_residues
MKSAMFRIMTVIALLACLLPVTALARDSSATVELTVVKRDTLISICRTYLRQPARWPEIGRLNRLGNNDLIRPGQRLIIP
VELLKGVPLDGWVAFVRSEVMIREARRKEWRALRSGDPVRQGSLIRTGGEGAVEIVFDDGSSLYQHPDSTLDLSASQLKA
GNHLFRRLFISAGRILVKVRNATGRDSRMEIRTPSAMAVARGTDFRVAADARKATTAEVLQGVVQVDALCRTVMVREGEG
TLVRKGEPPLQPRKLLPPPRLTEAPHLYRGTPFRLSFQPVDGAVSHRLLLSRDREGRDLVRELLFRAGESPELSGLEDGV
YYCQALSIDAYGLEGAFSAPVAVTLRANPLSPFIQEPHDGSTFTGGRVSFRWLKVGDAASYQLQISPDCSFAPSSVSLVD
VADTSVQREFSDLGKQCFRIRSMAVDGFAGNWSDPLSFTLLPPPPAPPLEKPDQQGNKLHLRWPSQGEGVSYHVQLADNE
RFDSPLVDQRLAEPELSLDAPQRGGVYYVRTSSIDPQGNEGPFSPPQSFEVRRWWPFAAGGALGAAGLILLLVL

Specific function: Unknown

COG id: COG4254

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 60930; Mature: 60930

Theoretical pI: Translated: 8.96; Mature: 8.96

Prosite motif: PS50853 FN3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSAMFRIMTVIALLACLLPVTALARDSSATVELTVVKRDTLISICRTYLRQPARWPEIG
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHCCCCCCCCH
RLNRLGNNDLIRPGQRLIIPVELLKGVPLDGWVAFVRSEVMIREARRKEWRALRSGDPVR
HHHCCCCCCCCCCCCEEEEEHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
QGSLIRTGGEGAVEIVFDDGSSLYQHPDSTLDLSASQLKAGNHLFRRLFISAGRILVKVR
CCCEEEECCCCEEEEEECCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEEE
NATGRDSRMEIRTPSAMAVARGTDFRVAADARKATTAEVLQGVVQVDALCRTVMVREGEG
CCCCCCCEEEEECCCEEEEECCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHEEECCCC
TLVRKGEPPLQPRKLLPPPRLTEAPHLYRGTPFRLSFQPVDGAVSHRLLLSRDREGRDLV
CEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHCCCCCHHHH
RELLFRAGESPELSGLEDGVYYCQALSIDAYGLEGAFSAPVAVTLRANPLSPFIQEPHDG
HHHHHHCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCEEEEEECCCCCHHHCCCCCC
STFTGGRVSFRWLKVGDAASYQLQISPDCSFAPSSVSLVDVADTSVQREFSDLGKQCFRI
CCCCCCCEEEEEEEECCCCEEEEEECCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHH
RSMAVDGFAGNWSDPLSFTLLPPPPAPPLEKPDQQGNKLHLRWPSQGEGVSYHVQLADNE
HHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEECCCC
RFDSPLVDQRLAEPELSLDAPQRGGVYYVRTSSIDPQGNEGPFSPPQSFEVRRWWPFAAG
CCCCCHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCC
GALGAAGLILLLVL
CHHHHHHHHHHHCC
>Mature Secondary Structure
MKSAMFRIMTVIALLACLLPVTALARDSSATVELTVVKRDTLISICRTYLRQPARWPEIG
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHCCCCCCCCH
RLNRLGNNDLIRPGQRLIIPVELLKGVPLDGWVAFVRSEVMIREARRKEWRALRSGDPVR
HHHCCCCCCCCCCCCEEEEEHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
QGSLIRTGGEGAVEIVFDDGSSLYQHPDSTLDLSASQLKAGNHLFRRLFISAGRILVKVR
CCCEEEECCCCEEEEEECCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEEE
NATGRDSRMEIRTPSAMAVARGTDFRVAADARKATTAEVLQGVVQVDALCRTVMVREGEG
CCCCCCCEEEEECCCEEEEECCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHEEECCCC
TLVRKGEPPLQPRKLLPPPRLTEAPHLYRGTPFRLSFQPVDGAVSHRLLLSRDREGRDLV
CEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHCCCCCHHHH
RELLFRAGESPELSGLEDGVYYCQALSIDAYGLEGAFSAPVAVTLRANPLSPFIQEPHDG
HHHHHHCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCEEEEEECCCCCHHHCCCCCC
STFTGGRVSFRWLKVGDAASYQLQISPDCSFAPSSVSLVDVADTSVQREFSDLGKQCFRI
CCCCCCCEEEEEEEECCCCEEEEEECCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHH
RSMAVDGFAGNWSDPLSFTLLPPPPAPPLEKPDQQGNKLHLRWPSQGEGVSYHVQLADNE
HHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEECCCC
RFDSPLVDQRLAEPELSLDAPQRGGVYYVRTSSIDPQGNEGPFSPPQSFEVRRWWPFAAG
CCCCCHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCC
GALGAAGLILLLVL
CHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA