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The map label for this gene is ydjI [H]

Identifier: 118579568

GI number: 118579568

Start: 1179535

End: 1180617

Strand: Reverse

Name: ydjI [H]

Synonym: Ppro_1136

Alternate gene names: 118579568

Gene position: 1180617-1179535 (Counterclockwise)

Preceding gene: 118579569

Following gene: 118579567

Centisome position: 29.46

GC content: 63.9

Gene sequence:

>1083_bases
ATGGGAGTCATGGACAAGCTCAAGGGAGAATTGATCGACATTATCCAGTGGCTGGACGACACCCACGACACCCTGGTGTA
CCGTTTCGTACGCTACGACAACGAGATCAAGTACGGAGCCAGGCTGGTGGTGCGCGAAGGGCAGATGGCGGTGCTGATCA
GCGAGGGAAAACTGGCCGATGTGTTCCAGCCGGGCACCTACCGCCTGGAAACCCGCAACATGCCACTACTGGCCACCCTG
AAGGGATGGAAATACGGCTTTTCCAGCCCCTTCAAGACCGAGGTCTACTTCTGCAGCACGCGCCAGTTCACCAACCTGAA
ATGGGGCACCCCCGGACCGGTGACCATGCGCGACCCCGAACTGGGCGCGGTACGGGTCACTGCCTACGGCCTCTATGCCA
TCAAACTGAAAGATCCGGCCCTGTTCATCAGGGAAATCGTCGGCACCAGCGGCGTCTTTTCGACCGCCTCCATCGAGGAT
AACCTGCGGGGCAAGATCGCCAGCCACATCAAGGAGGCACTGCCCCAGGCGGGCATTGCGGTGATCGACCTGGAGGGAAA
GGTCGTGCTGCTGGGCGAGACGCTCAGGGACAGGATCGCCCCGGCCATGCAGGCCTTCGGGCTGGAGCTTATCGAGGTGC
AGGTGCAGGACATCGGGCTCCCGGCCGAGGTGGAGCAGGCCATCGACAAGGCCGGCGCCATGCGCGTCATCGGCAACATG
CAGGAATATACCAGTTATGAGACAGCCAGCGCCATCCGTGACGCGGCCAACAATCCGGGCGGTCTGGCCGCGGCCGGCGT
TGCCGCCGGCATCGGCTTCGGCATGGCCGGACAGATGGGAACAGCAGTGGGCGCGCTCCAGGGCGGAGCAACCGCCCCGC
CTCCCCTGCCCCGCTTCTTCGTCGCCGTCAACAACCAGCAGACCGGGCCGTTCGACCGGGCAGACCTTCTCCGCATGTCC
CAGGCCGGCGAACTAACCCGGGAGAGCCTGGTCTGGAAACAGGGGATGGAGGGATGGACAAAGGCGGGACAGCTCCAGGA
GCTTGCCGACCTGTTCGCACTCCTGCCGCCCCCCCTGCCGTAA

Upstream 100 bases:

>100_bases
TGCAACTTGACTTTACGCCGTAGGCCTTGCTATAAAATAACCCTTAATATCAACAATTTAACACACAGCACCAACCACAC
ACCCGGAAGGAGACCGACAG

Downstream 100 bases:

>100_bases
GAGCAGGCCCCAGCGGCAAAAACCGCAACCGCAACCGCACGCACGACAGCAGTCAGACAGAAAACAGCACGTGCCTCAAG
ACCGGCTGGCGGGTGCGGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 360; Mature: 359

Protein sequence:

>360_residues
MGVMDKLKGELIDIIQWLDDTHDTLVYRFVRYDNEIKYGARLVVREGQMAVLISEGKLADVFQPGTYRLETRNMPLLATL
KGWKYGFSSPFKTEVYFCSTRQFTNLKWGTPGPVTMRDPELGAVRVTAYGLYAIKLKDPALFIREIVGTSGVFSTASIED
NLRGKIASHIKEALPQAGIAVIDLEGKVVLLGETLRDRIAPAMQAFGLELIEVQVQDIGLPAEVEQAIDKAGAMRVIGNM
QEYTSYETASAIRDAANNPGGLAAAGVAAGIGFGMAGQMGTAVGALQGGATAPPPLPRFFVAVNNQQTGPFDRADLLRMS
QAGELTRESLVWKQGMEGWTKAGQLQELADLFALLPPPLP

Sequences:

>Translated_360_residues
MGVMDKLKGELIDIIQWLDDTHDTLVYRFVRYDNEIKYGARLVVREGQMAVLISEGKLADVFQPGTYRLETRNMPLLATL
KGWKYGFSSPFKTEVYFCSTRQFTNLKWGTPGPVTMRDPELGAVRVTAYGLYAIKLKDPALFIREIVGTSGVFSTASIED
NLRGKIASHIKEALPQAGIAVIDLEGKVVLLGETLRDRIAPAMQAFGLELIEVQVQDIGLPAEVEQAIDKAGAMRVIGNM
QEYTSYETASAIRDAANNPGGLAAAGVAAGIGFGMAGQMGTAVGALQGGATAPPPLPRFFVAVNNQQTGPFDRADLLRMS
QAGELTRESLVWKQGMEGWTKAGQLQELADLFALLPPPLP
>Mature_359_residues
GVMDKLKGELIDIIQWLDDTHDTLVYRFVRYDNEIKYGARLVVREGQMAVLISEGKLADVFQPGTYRLETRNMPLLATLK
GWKYGFSSPFKTEVYFCSTRQFTNLKWGTPGPVTMRDPELGAVRVTAYGLYAIKLKDPALFIREIVGTSGVFSTASIEDN
LRGKIASHIKEALPQAGIAVIDLEGKVVLLGETLRDRIAPAMQAFGLELIEVQVQDIGLPAEVEQAIDKAGAMRVIGNMQ
EYTSYETASAIRDAANNPGGLAAAGVAAGIGFGMAGQMGTAVGALQGGATAPPPLPRFFVAVNNQQTGPFDRADLLRMSQ
AGELTRESLVWKQGMEGWTKAGQLQELADLFALLPPPLP

Specific function: Unknown

COG id: COG4260

COG function: function code S; Putative virion core protein (lumpy skin disease virus)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001107 [H]

Pfam domain/function: PF01145 Band_7 [H]

EC number: NA

Molecular weight: Translated: 39021; Mature: 38889

Theoretical pI: Translated: 5.10; Mature: 5.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGVMDKLKGELIDIIQWLDDTHDTLVYRFVRYDNEIKYGARLVVREGQMAVLISEGKLAD
CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCEEEEEECCCEEEEEECCCEEE
VFQPGTYRLETRNMPLLATLKGWKYGFSSPFKTEVYFCSTRQFTNLKWGTPGPVTMRDPE
CCCCCCEEEECCCCCEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCEECCCC
LGAVRVTAYGLYAIKLKDPALFIREIVGTSGVFSTASIEDNLRGKIASHIKEALPQAGIA
CCEEEEEEEEEEEEEECCHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHCCCCCEE
VIDLEGKVVLLGETLRDRIAPAMQAFGLELIEVQVQDIGLPAEVEQAIDKAGAMRVIGNM
EEEECCCEEEECHHHHHHHHHHHHHHCCEEEEEEHHHCCCCHHHHHHHHHHCHHHHHCCH
QEYTSYETASAIRDAANNPGGLAAAGVAAGIGFGMAGQMGTAVGALQGGATAPPPLPRFF
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCEEE
VAVNNQQTGPFDRADLLRMSQAGELTRESLVWKQGMEGWTKAGQLQELADLFALLPPPLP
EEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
GVMDKLKGELIDIIQWLDDTHDTLVYRFVRYDNEIKYGARLVVREGQMAVLISEGKLAD
CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCEEEEEECCCEEEEEECCCEEE
VFQPGTYRLETRNMPLLATLKGWKYGFSSPFKTEVYFCSTRQFTNLKWGTPGPVTMRDPE
CCCCCCEEEECCCCCEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCEECCCC
LGAVRVTAYGLYAIKLKDPALFIREIVGTSGVFSTASIEDNLRGKIASHIKEALPQAGIA
CCEEEEEEEEEEEEEECCHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHCCCCCEE
VIDLEGKVVLLGETLRDRIAPAMQAFGLELIEVQVQDIGLPAEVEQAIDKAGAMRVIGNM
EEEECCCEEEECHHHHHHHHHHHHHHCCEEEEEEHHHCCCCHHHHHHHHHHCHHHHHCCH
QEYTSYETASAIRDAANNPGGLAAAGVAAGIGFGMAGQMGTAVGALQGGATAPPPLPRFF
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCEEE
VAVNNQQTGPFDRADLLRMSQAGELTRESLVWKQGMEGWTKAGQLQELADLFALLPPPLP
EEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9455482; 9384377 [H]