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The map label for this gene is 118579530

Identifier: 118579530

GI number: 118579530

Start: 1144835

End: 1145065

Strand: Reverse

Name: 118579530

Synonym: Ppro_1097

Alternate gene names: NA

Gene position: 1145065-1144835 (Counterclockwise)

Preceding gene: 118579531

Following gene: 118579529

Centisome position: 28.57

GC content: 51.08

Gene sequence:

>231_bases
ATGAAAGCACTTGTTGAAACCATTGCCAAGTCACTCGTCGATGACCCCAATCAGGTCCAGGCTGCTGAAGAGATGGAAGA
GGATACGCTGGTCATCAAGCTGACGGTTGCAAAAGAGGATATGGGGCGAATTATCGGCAAGGAAGGGCGCACGGCCAAGG
CCATCCGCACCATACTGAACGCGGTTTCCACCAAGGATAACAAGAAGGCTATCCTCAAGATCGTTGAATAG

Upstream 100 bases:

>100_bases
GGCCGGCATCCTGGACAAGGCAACGGCTTAAGCAGATCCGGCATATCCTTGCATCCACCTCCGGTACGCCGGATATTCTA
TATGAGCAGAGGAATCCGAC

Downstream 100 bases:

>100_bases
ATGATTGATTCCGAATCCTTGATTCCCGTGGGCAAGCTCGTCGCTACCCACGGGATCAGGGGAATGCTGAAGTTACACTC
CTATTCGGGCAGCGTGGAGA

Product: KH domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 76; Mature: 76

Protein sequence:

>76_residues
MKALVETIAKSLVDDPNQVQAAEEMEEDTLVIKLTVAKEDMGRIIGKEGRTAKAIRTILNAVSTKDNKKAILKIVE

Sequences:

>Translated_76_residues
MKALVETIAKSLVDDPNQVQAAEEMEEDTLVIKLTVAKEDMGRIIGKEGRTAKAIRTILNAVSTKDNKKAILKIVE
>Mature_76_residues
MKALVETIAKSLVDDPNQVQAAEEMEEDTLVIKLTVAKEDMGRIIGKEGRTAKAIRTILNAVSTKDNKKAILKIVE

Specific function: Unknown

COG id: COG1837

COG function: function code R; Predicted RNA-binding protein (contains KH domain)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 KH domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009019
- InterPro:   IPR018111
- InterPro:   IPR020627 [H]

Pfam domain/function: PF00013 KH_1 [H]

EC number: NA

Molecular weight: Translated: 8336; Mature: 8336

Theoretical pI: Translated: 6.84; Mature: 6.84

Prosite motif: PS50084 KH_TYPE_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKALVETIAKSLVDDPNQVQAAEEMEEDTLVIKLTVAKEDMGRIIGKEGRTAKAIRTILN
CHHHHHHHHHHHCCCCHHHHHHHHCCCCEEEEEEEECHHHHHHHHCCCCCHHHHHHHHHH
AVSTKDNKKAILKIVE
HHCCCCCCHHHHEECC
>Mature Secondary Structure
MKALVETIAKSLVDDPNQVQAAEEMEEDTLVIKLTVAKEDMGRIIGKEGRTAKAIRTILN
CHHHHHHHHHHHCCCCHHHHHHHHCCCCEEEEEEEECHHHHHHHHCCCCCHHHHHHHHHH
AVSTKDNKKAILKIVE
HHCCCCCCHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11466286 [H]