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The map label for this gene is citE [H]

Identifier: 118579518

GI number: 118579518

Start: 1135856

End: 1136776

Strand: Reverse

Name: citE [H]

Synonym: Ppro_1085

Alternate gene names: 118579518

Gene position: 1136776-1135856 (Counterclockwise)

Preceding gene: 118579519

Following gene: 118579517

Centisome position: 28.36

GC content: 63.74

Gene sequence:

>921_bases
ATGCCGGAATTCCAGCTGCGCCGGTCGCTGCTCTACGTGCCGGGCAACATGCCGTCCATGCTGCAGAACGTGCCGCTGTT
CACCTGCGACGCCGTGATCATCGATCTTGAAGACGCCGTCCCGCTGAACGAAAAGGACGCCGCCCGCATCCTGGTGAAAC
GCTTCCTGGAGAGCCACACCAGGCGCAACAAGGAGATCCTGGTACGCATCAACCCCCTGGACAGCAAGTGGGCCTATCAC
GACCTGAAGGCGGTGCTCCCCTTTCTTCCCGACGGCATCCGCCTGCCCAAGGCCGACACGCCCGAGATCGTCGAGCACCT
GGACACCATGCTGACCGAATTCGAGGAAGAGCTGGGGCTGGAGATCGGCCGCTTCCGCATCCTCCCCTCCATCGAGAGCG
CCCAGGGGGTGATCAACGCCAACGACATCGCCCGCACCTCCAAACGGGTCTTCGGACTCGGCTTCGGCGCGGAGGATTAC
ACCGCCAGCATGGAGATCGAGCGCACCAAGGGGGGGGAGGAGCTGTTCAACGCCCGCATGACCATACTCTGGGCAGCAAA
GGCCGCCGGCATCCAGGCCATCGACACCATCTTCGCCGATCTCAACGACATGGAGGGACTGCGCCGGGAGACCGAGCTGG
CCAAGAAACTGGGCTACACCGGTAAGTGCATGGTCAACCCGCGCCAGATCGACGTGATCCACGACGTCTTCGCCCCCAAG
CAGGAAGAGGTGGACTATGCCCTGCAGGTCATCGACGCCATCAAGCGCGCCCGCACCATGGGCACCGGCGTCATCTCCCT
GAAGGGCAAGATGATCGACGCGCCGGTGGTCAAGCGCGCGGCGCGGGTGCTGCGCACCGCCTTTGCCCACGGCCTGGTGG
ACGAGATCATTCACGAGGAGGATATCCATGGCGCTGAATAG

Upstream 100 bases:

>100_bases
CTGCGAGATCGTGCTGACCGAGCTGGTGGTGGAGGGGGTCGAGCGTCACCACTCCACATCCGGCGGCATTCCCACCATCT
ATTTCAACGAGGAGTAAACC

Downstream 100 bases:

>100_bases
CCTGGGGCGCACCATCCCCGACAGCTTTGCCGGCAGTAAGCTGATCCCCTACCAGGATCCCTGGTCGCTCATGCCCCACA
CCCTGCGGGCCACCCGGCCG

Product: Citryl-CoA lyase

Products: NA

Alternate protein names: Citrase beta chain; Citrate (pro-3S)-lyase subunit beta; Citryl-CoA lyase subunit [H]

Number of amino acids: Translated: 306; Mature: 305

Protein sequence:

>306_residues
MPEFQLRRSLLYVPGNMPSMLQNVPLFTCDAVIIDLEDAVPLNEKDAARILVKRFLESHTRRNKEILVRINPLDSKWAYH
DLKAVLPFLPDGIRLPKADTPEIVEHLDTMLTEFEEELGLEIGRFRILPSIESAQGVINANDIARTSKRVFGLGFGAEDY
TASMEIERTKGGEELFNARMTILWAAKAAGIQAIDTIFADLNDMEGLRRETELAKKLGYTGKCMVNPRQIDVIHDVFAPK
QEEVDYALQVIDAIKRARTMGTGVISLKGKMIDAPVVKRAARVLRTAFAHGLVDEIIHEEDIHGAE

Sequences:

>Translated_306_residues
MPEFQLRRSLLYVPGNMPSMLQNVPLFTCDAVIIDLEDAVPLNEKDAARILVKRFLESHTRRNKEILVRINPLDSKWAYH
DLKAVLPFLPDGIRLPKADTPEIVEHLDTMLTEFEEELGLEIGRFRILPSIESAQGVINANDIARTSKRVFGLGFGAEDY
TASMEIERTKGGEELFNARMTILWAAKAAGIQAIDTIFADLNDMEGLRRETELAKKLGYTGKCMVNPRQIDVIHDVFAPK
QEEVDYALQVIDAIKRARTMGTGVISLKGKMIDAPVVKRAARVLRTAFAHGLVDEIIHEEDIHGAE
>Mature_305_residues
PEFQLRRSLLYVPGNMPSMLQNVPLFTCDAVIIDLEDAVPLNEKDAARILVKRFLESHTRRNKEILVRINPLDSKWAYHD
LKAVLPFLPDGIRLPKADTPEIVEHLDTMLTEFEEELGLEIGRFRILPSIESAQGVINANDIARTSKRVFGLGFGAEDYT
ASMEIERTKGGEELFNARMTILWAAKAAGIQAIDTIFADLNDMEGLRRETELAKKLGYTGKCMVNPRQIDVIHDVFAPKQ
EEVDYALQVIDAIKRARTMGTGVISLKGKMIDAPVVKRAARVLRTAFAHGLVDEIIHEEDIHGAE

Specific function: Represents a citryl-ACP lyase [H]

COG id: COG2301

COG function: function code G; Citrate lyase beta subunit

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HpcH/HpaI aldolase family. Citrate lyase beta subunit subfamily [H]

Homologues:

Organism=Homo sapiens, GI45545437, Length=291, Percent_Identity=32.3024054982818, Blast_Score=161, Evalue=8e-40,
Organism=Escherichia coli, GI87081764, Length=289, Percent_Identity=43.9446366782007, Blast_Score=238, Evalue=3e-64,
Organism=Caenorhabditis elegans, GI17557458, Length=296, Percent_Identity=30.7432432432432, Blast_Score=145, Evalue=3e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005000
- InterPro:   IPR011206
- InterPro:   IPR006475
- InterPro:   IPR015813 [H]

Pfam domain/function: PF03328 HpcH_HpaI [H]

EC number: =4.1.3.6; =4.1.3.34 [H]

Molecular weight: Translated: 34316; Mature: 34185

Theoretical pI: Translated: 5.30; Mature: 5.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPEFQLRRSLLYVPGNMPSMLQNVPLFTCDAVIIDLEDAVPLNEKDAARILVKRFLESHT
CCCHHHHHCEEECCCCCHHHHHCCCCEEECEEEEECCCCCCCCCHHHHHHHHHHHHHHHH
RRNKEILVRINPLDSKWAYHDLKAVLPFLPDGIRLPKADTPEIVEHLDTMLTEFEEELGL
CCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC
EIGRFRILPSIESAQGVINANDIARTSKRVFGLGFGAEDYTASMEIERTKGGEELFNARM
EEHHEEECCCCHHHCCCCCCHHHHHHHHHHEEECCCCCCCEEEEEEECCCCHHHHHHHHH
TILWAAKAAGIQAIDTIFADLNDMEGLRRETELAKKLGYTGKCMVNPRQIDVIHDVFAPK
HEEEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHCCC
QEEVDYALQVIDAIKRARTMGTGVISLKGKMIDAPVVKRAARVLRTAFAHGLVDEIIHEE
HHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
DIHGAE
CCCCCC
>Mature Secondary Structure 
PEFQLRRSLLYVPGNMPSMLQNVPLFTCDAVIIDLEDAVPLNEKDAARILVKRFLESHT
CCHHHHHCEEECCCCCHHHHHCCCCEEECEEEEECCCCCCCCCHHHHHHHHHHHHHHHH
RRNKEILVRINPLDSKWAYHDLKAVLPFLPDGIRLPKADTPEIVEHLDTMLTEFEEELGL
CCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC
EIGRFRILPSIESAQGVINANDIARTSKRVFGLGFGAEDYTASMEIERTKGGEELFNARM
EEHHEEECCCCHHHCCCCCCHHHHHHHHHHEEECCCCCCCEEEEEEECCCCHHHHHHHHH
TILWAAKAAGIQAIDTIFADLNDMEGLRRETELAKKLGYTGKCMVNPRQIDVIHDVFAPK
HEEEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHCCC
QEEVDYALQVIDAIKRARTMGTGVISLKGKMIDAPVVKRAARVLRTAFAHGLVDEIIHEE
HHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
DIHGAE
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]