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The map label for this gene is pilQ [H]

Identifier: 118579431

GI number: 118579431

Start: 1040015

End: 1042609

Strand: Direct

Name: pilQ [H]

Synonym: Ppro_0996

Alternate gene names: 118579431

Gene position: 1040015-1042609 (Clockwise)

Preceding gene: 118579430

Following gene: 118579433

Centisome position: 25.95

GC content: 51.83

Gene sequence:

>2595_bases
ATGCCGAATTCCGCCGAATCCGCACAGGATATGTCGCAAGTTACTCACAAAACTCTTGCCGCAATCGAGTCGATAACGGT
GCTCGGGGAAGGGAGCGCGGCGGAACTTGTTATCAAACTGTCCGCACCGACCACCTACACCAGTTACAGGACCACGTCTC
CCTTGCGGCTTGTTATAGACCTTTCCCAGTCAGGCCAAGGTGCGATCATGGCGCCGGTAGTGCTGAACAGTGGCAATTTC
AAGGCTGTTACAGTAAGCAGTTATGACACCGACGCCGGAGTGTTGACCCGCCTGGATGTAGAACTTGTTAAGGATGCTGA
TGCCGTTCTGAGTGTGTCAAAAGAAAAACCGACTGAAATCCGGGTCTCATTCCCGTCGCTATCTTCTCCCATCACGGAAA
CGCCCGTTTCAGCTGCTGTTACGGACAATTCCGTAGTTACAGGAAATTCTTCGCCGCAGCCCCAGGAAACCACGGCAGCT
ATACCGGAACCGGTCCCGTCAGCACAAAGCGCAACTATCCGTGCCCTGACGGCTGTGTCCGTCAAGAACAATGCTATCGT
ACTCGCCATTGATGGCGGTGTTGGTGAGTTTACAGCGTTCCGGCTGAGTAAGCCTGATCGTTTCGCGATAGATCTCCATG
GCGTGAAGAGTGTTCTGGCGTCGAGATTGTTTTCCGTAAATGCTTTTGGCGTTTCATCAGTTCGTTTGGGACTTTACCCT
GACAAGGTGCGTGTCGTGCTTGATGCGGTCGATGGTGCTTTGCCCAAGGTGGTTGCGGAGAAAACAAACGAGGGCATACG
CGTGGCGCCGATGGATACCTCTTCAGTATCCGTAGCCACCCGGGGGGACGGTGCGACCGCCTCAACCGCGAACAATGGGC
CAGCACCTGCCTCCCGGGCCGATGATATGAAACCAGCCGCTACTCTGTCCGTGCCACGTGTCGACATGATTGATTTTCAG
GTTGTAAATGGTATTTCCCGTGTTGCCGTGAAAGTGGTCGGTAATGCCGTTGCGGAGCCGCCTGAAAAGAGTCCTGGCTT
TGTGACGCTGACCATCAAGAATACGAGTCTACCCAAGAGCTTGCAACGCTCCTTGGAAGCAAAGGGCTTTTGGTCTCCGG
TTTTGCGCGTTACCCCGCTTCTTGTGACTACCCGTAAGGGAACAGACACGAAAATCCGCATTGCCATGCGGAAAACGGTG
CCGTATGAGTATCGTCGTGAAGGTGACATGCTTTTCATTGATTTCAAGAACCCGGAAGGCATGATTGCTGAGAAACCGGC
AGTACCTTATCTGGTTGCGAAAAGTGGCGAGGAGCCTCCTGGCAGCGATGCCGCGCTTAGGTCCGAGCTTGCCTCTTCCC
CGGACCCTTCACGCAAGCCATTAGGATCCGCAAAGGAGTACTGGGGGAGAAAGGTCACTCTCGAGTTTGCTGATGCTGAG
GTGCGTAAAATATTCCAGTTGTTATCCGAAGTGAGTAACAAGAATTTCGTGCTGGGAGACGATGTGACTGGAACCATAAG
CATCAAACTGGTCAATGTGCCCTGGGATCAGGCTCTGGATATCATTCTTGATGCAAAAGACCTTGAAACGCGTGAAATAG
GGAATGTCTTGACAATCAAAAAACGAGGTGCGTTTAAGGAACAGTTGGTAAAGCAAACCACGTATACGGAGTACTTTTCC
GTTAACTACAGTGATGCAAAATCGATCAAGCCGCAATTAGAAGCGTTGCTTGATCCTGTTCTGTTAAAGGAAAAGTTGGC
TACCATCACTGCTGATGACCGTACTAACACGATTATTGTCACTTCCGTGCAGTCGGATATAGACAGAATTAGGGCACATC
TGGTGAAGATGGATATTCCGGAAAAGCAGGTCATGATCGAAGCGCGCATAGTGGAGGCCACATCCACCTTTACCCGCAGT
CTGGGGGTGAACTGGGGAGTTCACTACACCGATGCTTCCGGGTCGCTGCTGGGGATTACCCAGCTGGATACCGGCTTCGG
CGGCATAACAACCGCTCCGCCTACCAGCGGTACCGGAGATTCAGCAGGTGGAAATATGGGCATTTCCTTCGGTGCCCTGG
GGAATGGTGTCCAGCTTGATATGCGGCTAAGCGCCGCAGCCACCGCTGGTTTGATCAAGATCATCTCCTGCCCAAAGGTT
GCTACGCTTAATAATAAGAAAGCCAAGATCGCTCAAGGGCAGCAGATTCCCTATACTGCATCTGATGGTGATAATGTGGA
GACAAAGTTTGTCGAAGCTGCCCTGTCGCTCGAGGTTACGCCGCACATCAACGCCAACGGCACCATCAGCATGAACATTG
TAGCAAAGAATGATTCTATGGGGGACGCCGTGGGTAGTTCTACTGCGCCTGCCATCAATACCAAAGAGGCAACGACTGAG
ATGCTGCTGCGTGACGGAGAGACAACCGTTATTGGCGGCATATTCGTGGACACTGACAATGATTCGGATGCTGGCGTTCC
CTTCCTTATGGATATTCCGGCTATCGGTAAGTTCTTTAAGACGAACAGCAAAACAAAAACCAAGACTGAACTGCTGGTTT
TTATTACACCGCGTATCATGGCGACGACTCTGTAA

Upstream 100 bases:

>100_bases
CTGCCCAGGAAACAGTAAGGAGCTCCGCATGATGTGGATGAGAAGACAATCAATTCTTTTGGCGCTTTCATTGGCAGTTG
TTTCTGGCTTTTCGAGCCTT

Downstream 100 bases:

>100_bases
ACAAGGGGAACTACCTTATTTGGTTGAGCCGTGATCTTTCGAAAGAGTATGTAACAACAACCTCCGTGGAATGGTGCTCC
CGGAGGTTGTTGTCTTTGAA

Product: type IV pilus secretin PilQ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 864; Mature: 863

Protein sequence:

>864_residues
MPNSAESAQDMSQVTHKTLAAIESITVLGEGSAAELVIKLSAPTTYTSYRTTSPLRLVIDLSQSGQGAIMAPVVLNSGNF
KAVTVSSYDTDAGVLTRLDVELVKDADAVLSVSKEKPTEIRVSFPSLSSPITETPVSAAVTDNSVVTGNSSPQPQETTAA
IPEPVPSAQSATIRALTAVSVKNNAIVLAIDGGVGEFTAFRLSKPDRFAIDLHGVKSVLASRLFSVNAFGVSSVRLGLYP
DKVRVVLDAVDGALPKVVAEKTNEGIRVAPMDTSSVSVATRGDGATASTANNGPAPASRADDMKPAATLSVPRVDMIDFQ
VVNGISRVAVKVVGNAVAEPPEKSPGFVTLTIKNTSLPKSLQRSLEAKGFWSPVLRVTPLLVTTRKGTDTKIRIAMRKTV
PYEYRREGDMLFIDFKNPEGMIAEKPAVPYLVAKSGEEPPGSDAALRSELASSPDPSRKPLGSAKEYWGRKVTLEFADAE
VRKIFQLLSEVSNKNFVLGDDVTGTISIKLVNVPWDQALDIILDAKDLETREIGNVLTIKKRGAFKEQLVKQTTYTEYFS
VNYSDAKSIKPQLEALLDPVLLKEKLATITADDRTNTIIVTSVQSDIDRIRAHLVKMDIPEKQVMIEARIVEATSTFTRS
LGVNWGVHYTDASGSLLGITQLDTGFGGITTAPPTSGTGDSAGGNMGISFGALGNGVQLDMRLSAAATAGLIKIISCPKV
ATLNNKKAKIAQGQQIPYTASDGDNVETKFVEAALSLEVTPHINANGTISMNIVAKNDSMGDAVGSSTAPAINTKEATTE
MLLRDGETTVIGGIFVDTDNDSDAGVPFLMDIPAIGKFFKTNSKTKTKTELLVFITPRIMATTL

Sequences:

>Translated_864_residues
MPNSAESAQDMSQVTHKTLAAIESITVLGEGSAAELVIKLSAPTTYTSYRTTSPLRLVIDLSQSGQGAIMAPVVLNSGNF
KAVTVSSYDTDAGVLTRLDVELVKDADAVLSVSKEKPTEIRVSFPSLSSPITETPVSAAVTDNSVVTGNSSPQPQETTAA
IPEPVPSAQSATIRALTAVSVKNNAIVLAIDGGVGEFTAFRLSKPDRFAIDLHGVKSVLASRLFSVNAFGVSSVRLGLYP
DKVRVVLDAVDGALPKVVAEKTNEGIRVAPMDTSSVSVATRGDGATASTANNGPAPASRADDMKPAATLSVPRVDMIDFQ
VVNGISRVAVKVVGNAVAEPPEKSPGFVTLTIKNTSLPKSLQRSLEAKGFWSPVLRVTPLLVTTRKGTDTKIRIAMRKTV
PYEYRREGDMLFIDFKNPEGMIAEKPAVPYLVAKSGEEPPGSDAALRSELASSPDPSRKPLGSAKEYWGRKVTLEFADAE
VRKIFQLLSEVSNKNFVLGDDVTGTISIKLVNVPWDQALDIILDAKDLETREIGNVLTIKKRGAFKEQLVKQTTYTEYFS
VNYSDAKSIKPQLEALLDPVLLKEKLATITADDRTNTIIVTSVQSDIDRIRAHLVKMDIPEKQVMIEARIVEATSTFTRS
LGVNWGVHYTDASGSLLGITQLDTGFGGITTAPPTSGTGDSAGGNMGISFGALGNGVQLDMRLSAAATAGLIKIISCPKV
ATLNNKKAKIAQGQQIPYTASDGDNVETKFVEAALSLEVTPHINANGTISMNIVAKNDSMGDAVGSSTAPAINTKEATTE
MLLRDGETTVIGGIFVDTDNDSDAGVPFLMDIPAIGKFFKTNSKTKTKTELLVFITPRIMATTL
>Mature_863_residues
PNSAESAQDMSQVTHKTLAAIESITVLGEGSAAELVIKLSAPTTYTSYRTTSPLRLVIDLSQSGQGAIMAPVVLNSGNFK
AVTVSSYDTDAGVLTRLDVELVKDADAVLSVSKEKPTEIRVSFPSLSSPITETPVSAAVTDNSVVTGNSSPQPQETTAAI
PEPVPSAQSATIRALTAVSVKNNAIVLAIDGGVGEFTAFRLSKPDRFAIDLHGVKSVLASRLFSVNAFGVSSVRLGLYPD
KVRVVLDAVDGALPKVVAEKTNEGIRVAPMDTSSVSVATRGDGATASTANNGPAPASRADDMKPAATLSVPRVDMIDFQV
VNGISRVAVKVVGNAVAEPPEKSPGFVTLTIKNTSLPKSLQRSLEAKGFWSPVLRVTPLLVTTRKGTDTKIRIAMRKTVP
YEYRREGDMLFIDFKNPEGMIAEKPAVPYLVAKSGEEPPGSDAALRSELASSPDPSRKPLGSAKEYWGRKVTLEFADAEV
RKIFQLLSEVSNKNFVLGDDVTGTISIKLVNVPWDQALDIILDAKDLETREIGNVLTIKKRGAFKEQLVKQTTYTEYFSV
NYSDAKSIKPQLEALLDPVLLKEKLATITADDRTNTIIVTSVQSDIDRIRAHLVKMDIPEKQVMIEARIVEATSTFTRSL
GVNWGVHYTDASGSLLGITQLDTGFGGITTAPPTSGTGDSAGGNMGISFGALGNGVQLDMRLSAAATAGLIKIISCPKVA
TLNNKKAKIAQGQQIPYTASDGDNVETKFVEAALSLEVTPHINANGTISMNIVAKNDSMGDAVGSSTAPAINTKEATTEM
LLRDGETTVIGGIFVDTDNDSDAGVPFLMDIPAIGKFFKTNSKTKTKTELLVFITPRIMATTL

Specific function: Essential for the formation of pili. Involved in the biogenesis of type 4 fimbriae probably by serving as a "porthole" allowing passage of the fimbrae through the outer membrane [H]

COG id: COG4796

COG function: function code U; Type II secretory pathway, component HofQ

Gene ontology:

Cell location: Cell outer membrane (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP D family [H]

Homologues:

Organism=Escherichia coli, GI1789793, Length=408, Percent_Identity=29.656862745098, Blast_Score=184, Evalue=2e-47,
Organism=Escherichia coli, GI87082242, Length=423, Percent_Identity=28.3687943262411, Blast_Score=121, Evalue=2e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001775
- InterPro:   IPR005644
- InterPro:   IPR013355
- InterPro:   IPR011662
- InterPro:   IPR004846
- InterPro:   IPR004845 [H]

Pfam domain/function: PF00263 Secretin; PF03958 Secretin_N; PF07660 STN [H]

EC number: NA

Molecular weight: Translated: 91702; Mature: 91571

Theoretical pI: Translated: 5.74; Mature: 5.74

Prosite motif: PS00430 TONB_DEPENDENT_REC_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPNSAESAQDMSQVTHKTLAAIESITVLGEGSAAELVIKLSAPTTYTSYRTTSPLRLVID
CCCCHHHHHHHHHHHHHHHHHHHEEEEEECCCCEEEEEEEECCCEECCCCCCCCEEEEEE
LSQSGQGAIMAPVVLNSGNFKAVTVSSYDTDAGVLTRLDVELVKDADAVLSVSKEKPTEI
ECCCCCCEEEEEEEECCCCEEEEEEECCCCCCCEEEEECHHHHHCCHHHEEECCCCCCEE
RVSFPSLSSPITETPVSAAVTDNSVVTGNSSPQPQETTAAIPEPVPSAQSATIRALTAVS
EEECCCCCCCCCCCCCEEEEECCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEE
VKNNAIVLAIDGGVGEFTAFRLSKPDRFAIDLHGVKSVLASRLFSVNAFGVSSVRLGLYP
ECCCEEEEEEECCCCCEEEEEECCCCEEEEEHHHHHHHHHHHHHEEEECCCCEEEEECCC
DKVRVVLDAVDGALPKVVAEKTNEGIRVAPMDTSSVSVATRGDGATASTANNGPAPASRA
CHHEEEEEHHCCHHHHHHHHHCCCCEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCC
DDMKPAATLSVPRVDMIDFQVVNGISRVAVKVVGNAVAEPPEKSPGFVTLTIKNTSLPKS
CCCCCCEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCHH
LQRSLEAKGFWSPVLRVTPLLVTTRKGTDTKIRIAMRKTVPYEYRREGDMLFIDFKNPEG
HHHHHCCCCCCCCHHHHCEEEEEECCCCCCEEEEEEEECCCHHHCCCCCEEEEEECCCCC
MIAEKPAVPYLVAKSGEEPPGSDAALRSELASSPDPSRKPLGSAKEYWGRKVTLEFADAE
CEECCCCCCEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHCCCEEEEEECCHH
VRKIFQLLSEVSNKNFVLGDDVTGTISIKLVNVPWDQALDIILDAKDLETREIGNVLTIK
HHHHHHHHHHHCCCCEEEECCCCEEEEEEEEECCHHHHEEEEEECCCCCHHHCCCEEEEE
KRGAFKEQLVKQTTYTEYFSVNYSDAKSIKPQLEALLDPVLLKEKLATITADDRTNTIIV
CCCCHHHHHHHHHCCEEEEEEECCCHHHCCHHHHHHHHHHHHHHHHHEEEECCCCCEEEE
TSVQSDIDRIRAHLVKMDIPEKQVMIEARIVEATSTFTRSLGVNWGVHYTDASGSLLGIT
EECHHHHHHHHHHHHCCCCCCHHEEEEEEEEHHHHHHHHHCCCCCCEEEECCCCCEEEEE
QLDTGFGGITTAPPTSGTGDSAGGNMGISFGALGNGVQLDMRLSAAATAGLIKIISCPKV
EECCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCEEEEEEEHHHHHHCEEEEECCCCE
ATLNNKKAKIAQGQQIPYTASDGDNVETKFVEAALSLEVTPHINANGTISMNIVAKNDSM
EECCCCCCCCCCCCCCCEECCCCCCCHHHEEEEEEEEEECCCCCCCCEEEEEEEECCCCC
GDAVGSSTAPAINTKEATTEMLLRDGETTVIGGIFVDTDNDSDAGVPFLMDIPAIGKFFK
CCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCCCEEEECCHHHHHHH
TNSKTKTKTELLVFITPRIMATTL
CCCCCCCEEEEEEEEECCEEEECC
>Mature Secondary Structure 
PNSAESAQDMSQVTHKTLAAIESITVLGEGSAAELVIKLSAPTTYTSYRTTSPLRLVID
CCCHHHHHHHHHHHHHHHHHHHEEEEEECCCCEEEEEEEECCCEECCCCCCCCEEEEEE
LSQSGQGAIMAPVVLNSGNFKAVTVSSYDTDAGVLTRLDVELVKDADAVLSVSKEKPTEI
ECCCCCCEEEEEEEECCCCEEEEEEECCCCCCCEEEEECHHHHHCCHHHEEECCCCCCEE
RVSFPSLSSPITETPVSAAVTDNSVVTGNSSPQPQETTAAIPEPVPSAQSATIRALTAVS
EEECCCCCCCCCCCCCEEEEECCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEE
VKNNAIVLAIDGGVGEFTAFRLSKPDRFAIDLHGVKSVLASRLFSVNAFGVSSVRLGLYP
ECCCEEEEEEECCCCCEEEEEECCCCEEEEEHHHHHHHHHHHHHEEEECCCCEEEEECCC
DKVRVVLDAVDGALPKVVAEKTNEGIRVAPMDTSSVSVATRGDGATASTANNGPAPASRA
CHHEEEEEHHCCHHHHHHHHHCCCCEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCC
DDMKPAATLSVPRVDMIDFQVVNGISRVAVKVVGNAVAEPPEKSPGFVTLTIKNTSLPKS
CCCCCCEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCHH
LQRSLEAKGFWSPVLRVTPLLVTTRKGTDTKIRIAMRKTVPYEYRREGDMLFIDFKNPEG
HHHHHCCCCCCCCHHHHCEEEEEECCCCCCEEEEEEEECCCHHHCCCCCEEEEEECCCCC
MIAEKPAVPYLVAKSGEEPPGSDAALRSELASSPDPSRKPLGSAKEYWGRKVTLEFADAE
CEECCCCCCEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHCCCEEEEEECCHH
VRKIFQLLSEVSNKNFVLGDDVTGTISIKLVNVPWDQALDIILDAKDLETREIGNVLTIK
HHHHHHHHHHHCCCCEEEECCCCEEEEEEEEECCHHHHEEEEEECCCCCHHHCCCEEEEE
KRGAFKEQLVKQTTYTEYFSVNYSDAKSIKPQLEALLDPVLLKEKLATITADDRTNTIIV
CCCCHHHHHHHHHCCEEEEEEECCCHHHCCHHHHHHHHHHHHHHHHHEEEECCCCCEEEE
TSVQSDIDRIRAHLVKMDIPEKQVMIEARIVEATSTFTRSLGVNWGVHYTDASGSLLGIT
EECHHHHHHHHHHHHCCCCCCHHEEEEEEEEHHHHHHHHHCCCCCCEEEECCCCCEEEEE
QLDTGFGGITTAPPTSGTGDSAGGNMGISFGALGNGVQLDMRLSAAATAGLIKIISCPKV
EECCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCEEEEEEEHHHHHHCEEEEECCCCE
ATLNNKKAKIAQGQQIPYTASDGDNVETKFVEAALSLEVTPHINANGTISMNIVAKNDSM
EECCCCCCCCCCCCCCCEECCCCCCCHHHEEEEEEEEEECCCCCCCCEEEEEEEECCCCC
GDAVGSSTAPAINTKEATTEMLLRDGETTVIGGIFVDTDNDSDAGVPFLMDIPAIGKFFK
CCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCCCEEEECCHHHHHHH
TNSKTKTKTELLVFITPRIMATTL
CCCCCCCEEEEEEEEECCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7901733; 10984043 [H]