| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
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The map label for this gene is 118579430
Identifier: 118579430
GI number: 118579430
Start: 1039399
End: 1039932
Strand: Direct
Name: 118579430
Synonym: Ppro_0995
Alternate gene names: NA
Gene position: 1039399-1039932 (Clockwise)
Preceding gene: 118579429
Following gene: 118579431
Centisome position: 25.93
GC content: 45.13
Gene sequence:
>534_bases ATGCTGATTGGGATCGCGTCAGTTGGTTTTTTCGCTCAGGGTTGTAAAAAAGACGAGCCGAATCCGGAGCCTGTTTCTTC GGTTAAGTCCGAATCTGACAAGATACCAAAAGTTGAGAAGCCGGTACAGCAACAACTCAGTTCTCCTGTGAAACTGAGTC CGCTTGCCTCTAATCAGTTCGACTTCAGTTCGAAAAAGGATCCATTCAAACCACATCTTGTTGCCAAAAAACCTCCTGTG CCTGTTTTTGCAAGGTCGAAGCGCGTTAGCGCACTCGCTTTACCAATTCACCGTTTTGATGTCAATAACTATAAAGTAAT AGGGATAATTACCGGGATCAGAGAGAATCAGGCCATGGTAACGGACCCCAATGGTAAGGGATATGTAATAAAGGTCGGGA TGACGATAGGTAAAAACGAGGGGCGCATTACGTCCATATCCCAGAGTGGCGTAACTGTTCTGGAGCAATTCCAGGATGAT AATGGCAGAGTACGCAAGGAATATATTAAAATCAACCTGCCCAGGAAACAGTAA
Upstream 100 bases:
>100_bases ATGACAAAGGTTAATTGCCTTGCAACAACCTTCCGATTCCTTGACAAGAAAGAGATTGCTAATGACAAGAAACCTGTCAA ACAATAAATATCTGATAGGG
Downstream 100 bases:
>100_bases GGAGCTCCGCATGATGTGGATGAGAAGACAATCAATTCTTTTGGCGCTTTCATTGGCAGTTGTTTCTGGCTTTTCGAGCC TTATGCCGAATTCCGCCGAA
Product: putative type IV pilus assembly protein PilP
Products: NA
Alternate protein names: Pilus Assembly Protein PilP-Like; Fimbrial Assembly Protein; Type IV Pilus Assembly Lipoprotein PilP; Lipoprotein
Number of amino acids: Translated: 177; Mature: 177
Protein sequence:
>177_residues MLIGIASVGFFAQGCKKDEPNPEPVSSVKSESDKIPKVEKPVQQQLSSPVKLSPLASNQFDFSSKKDPFKPHLVAKKPPV PVFARSKRVSALALPIHRFDVNNYKVIGIITGIRENQAMVTDPNGKGYVIKVGMTIGKNEGRITSISQSGVTVLEQFQDD NGRVRKEYIKINLPRKQ
Sequences:
>Translated_177_residues MLIGIASVGFFAQGCKKDEPNPEPVSSVKSESDKIPKVEKPVQQQLSSPVKLSPLASNQFDFSSKKDPFKPHLVAKKPPV PVFARSKRVSALALPIHRFDVNNYKVIGIITGIRENQAMVTDPNGKGYVIKVGMTIGKNEGRITSISQSGVTVLEQFQDD NGRVRKEYIKINLPRKQ >Mature_177_residues MLIGIASVGFFAQGCKKDEPNPEPVSSVKSESDKIPKVEKPVQQQLSSPVKLSPLASNQFDFSSKKDPFKPHLVAKKPPV PVFARSKRVSALALPIHRFDVNNYKVIGIITGIRENQAMVTDPNGKGYVIKVGMTIGKNEGRITSISQSGVTVLEQFQDD NGRVRKEYIKINLPRKQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19527; Mature: 19527
Theoretical pI: Translated: 10.59; Mature: 10.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLIGIASVGFFAQGCKKDEPNPEPVSSVKSESDKIPKVEKPVQQQLSSPVKLSPLASNQF CEEEEECHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHCCCEEECCCCCCCC DFSSKKDPFKPHLVAKKPPVPVFARSKRVSALALPIHRFDVNNYKVIGIITGIRENQAMV CCCCCCCCCCCCEECCCCCCCEEECCCCCEEEEEEEEEECCCCEEEEEEEECCCCCCEEE TDPNGKGYVIKVGMTIGKNEGRITSISQSGVTVLEQFQDDNGRVRKEYIKINLPRKQ ECCCCCEEEEEEEEEECCCCCEEEEECCCCHHHHHHHCCCCCCEEEEEEEEECCCCC >Mature Secondary Structure MLIGIASVGFFAQGCKKDEPNPEPVSSVKSESDKIPKVEKPVQQQLSSPVKLSPLASNQF CEEEEECHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHCCCEEECCCCCCCC DFSSKKDPFKPHLVAKKPPVPVFARSKRVSALALPIHRFDVNNYKVIGIITGIRENQAMV CCCCCCCCCCCCEECCCCCCCEEECCCCCEEEEEEEEEECCCCEEEEEEEECCCCCCEEE TDPNGKGYVIKVGMTIGKNEGRITSISQSGVTVLEQFQDDNGRVRKEYIKINLPRKQ ECCCCCEEEEEEEEEECCCCCEEEEECCCCHHHHHHHCCCCCCEEEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA