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The map label for this gene is nrnA [H]

Identifier: 118579401

GI number: 118579401

Start: 1008264

End: 1009223

Strand: Direct

Name: nrnA [H]

Synonym: Ppro_0965

Alternate gene names: 118579401

Gene position: 1008264-1009223 (Clockwise)

Preceding gene: 118579400

Following gene: 118579402

Centisome position: 25.16

GC content: 61.04

Gene sequence:

>960_bases
ATGACCGAGACGATTCAGAACATAGTTGACGAGATCCGTGCCAACGGCTCGTTTCTCCTGACCACCCACGAGAGCCCGGA
TGGCGATGCGGTCGGCTCTTCCCTTGCCCTGGCCTCCTTCCTGCGCCGCATCGGCAAGCAGGTCTGCGTGCACTTCCGCG
ATCCGGTTCCCGAGTTGTTCGCCTTCCTCCCCGGAAGCGATACCGTTAACCCGCATATTCCGGAACAGGATTTCAACGTC
TCCTTTGTGCTGGACGTGGGTGAATTCCGACGGGCGGGCGACGAGTTTTGCTCCTTCAGGAGGGGGGGCACGCTGATCAA
CCTGGACCACCACCTCTCCTGCGAGTGCTTCGGCAGCCATAATTTGATCGATTCTGGCGCCGCCGCCACCGGTATCCTGG
TCTACCGCATCATCACCGCCTTTGGGTATGCCATGGACAGGGACACCGCCCTCTGTCTGTACACTGCCATCATCAGCGAT
ACCGGCTCGTTCCGCTATTCCAATGCCAACCGCGAGGCGTTCACGGTTGCTGGCGAGATGATCGAACAGGGCGTGAACGC
CTGGAGCGTGGCTGAACGTCTCTACGAGAGCCAGCCGCAGAAACGCCTGGAACTGCTGACCAGGGCACTGGCCACCCTAG
AGGTGATCTGTGGTGGCAGGGCTGCGTCACTGACCGTAACCAGCGACATGTATGACGCCACCGGAGCAAATGCCGAGCTG
ACCGATGGGTTTGTCAACTATCCCCGCTCAATCAGGGGGGTGGAGGTGGCGATCTTCTTCAGGCAGCTGGATGAGTGTAC
CTGCAAGGTAGGCTTCCGTTCCAAGGGGGCCGTCAACGTGGCCGGATTCGCCGCTGCCCTGGGTGGTGGCGGACACCACA
ACGCCGCCGGCTGCACGGTCTCCGGCGGTCTGGAAGAGATCAAGTCCCGCGTCTACGACATTGTGAACGCCTCCCTGTGA

Upstream 100 bases:

>100_bases
CTGACTATCCGGCATATACCGGAGCTGATCTTCAAGTACGATGAATCCCAGGAGTACGGTAACCGGATTGATTCCATCCT
CAGGGAGATCGCTACTGAGC

Downstream 100 bases:

>100_bases
TTAGCGGCTTCTTCGTTATCGATAAACCTGCCGGCATCAGCTCCCACGACGTGGTCAGCCGTGTGCGCAGAATCCTGGGT
ACACGCAGGGTGGGGCACAC

Product: phosphoesterase domain-containing protein

Products: NA

Alternate protein names: 3'(2'),5'-bisphosphate nucleotidase; 3'-phosphoadenosine 5'-phosphate phosphatase; PAP phosphatase; nanoRNAse [H]

Number of amino acids: Translated: 319; Mature: 318

Protein sequence:

>319_residues
MTETIQNIVDEIRANGSFLLTTHESPDGDAVGSSLALASFLRRIGKQVCVHFRDPVPELFAFLPGSDTVNPHIPEQDFNV
SFVLDVGEFRRAGDEFCSFRRGGTLINLDHHLSCECFGSHNLIDSGAAATGILVYRIITAFGYAMDRDTALCLYTAIISD
TGSFRYSNANREAFTVAGEMIEQGVNAWSVAERLYESQPQKRLELLTRALATLEVICGGRAASLTVTSDMYDATGANAEL
TDGFVNYPRSIRGVEVAIFFRQLDECTCKVGFRSKGAVNVAGFAAALGGGGHHNAAGCTVSGGLEEIKSRVYDIVNASL

Sequences:

>Translated_319_residues
MTETIQNIVDEIRANGSFLLTTHESPDGDAVGSSLALASFLRRIGKQVCVHFRDPVPELFAFLPGSDTVNPHIPEQDFNV
SFVLDVGEFRRAGDEFCSFRRGGTLINLDHHLSCECFGSHNLIDSGAAATGILVYRIITAFGYAMDRDTALCLYTAIISD
TGSFRYSNANREAFTVAGEMIEQGVNAWSVAERLYESQPQKRLELLTRALATLEVICGGRAASLTVTSDMYDATGANAEL
TDGFVNYPRSIRGVEVAIFFRQLDECTCKVGFRSKGAVNVAGFAAALGGGGHHNAAGCTVSGGLEEIKSRVYDIVNASL
>Mature_318_residues
TETIQNIVDEIRANGSFLLTTHESPDGDAVGSSLALASFLRRIGKQVCVHFRDPVPELFAFLPGSDTVNPHIPEQDFNVS
FVLDVGEFRRAGDEFCSFRRGGTLINLDHHLSCECFGSHNLIDSGAAATGILVYRIITAFGYAMDRDTALCLYTAIISDT
GSFRYSNANREAFTVAGEMIEQGVNAWSVAERLYESQPQKRLELLTRALATLEVICGGRAASLTVTSDMYDATGANAELT
DGFVNYPRSIRGVEVAIFFRQLDECTCKVGFRSKGAVNVAGFAAALGGGGHHNAAGCTVSGGLEEIKSRVYDIVNASL

Specific function: Bifunctional enzyme which has both oligoribonuclease and pAp-phosphatase activities. Degrades RNA oligonucleotides with a length of 5 nucleotides and shorter. Converts 3'(2')- phosphoadenosine 5'-phosphate (PAP) to AMP [H]

COG id: COG0618

COG function: function code R; Exopolyphosphatase-related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003156
- InterPro:   IPR001667 [H]

Pfam domain/function: PF01368 DHH; PF02272 DHHA1 [H]

EC number: =3.1.3.7 [H]

Molecular weight: Translated: 34384; Mature: 34253

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTETIQNIVDEIRANGSFLLTTHESPDGDAVGSSLALASFLRRIGKQVCVHFRDPVPELF
CCHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
AFLPGSDTVNPHIPEQDFNVSFVLDVGEFRRAGDEFCSFRRGGTLINLDHHLSCECFGSH
HCCCCCCCCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHCCCCEEEECCCCEEEEECCC
NLIDSGAAATGILVYRIITAFGYAMDRDTALCLYTAIISDTGSFRYSNANREAFTVAGEM
CCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEECCCCCHHHHHHHHH
IEQGVNAWSVAERLYESQPQKRLELLTRALATLEVICGGRAASLTVTSDMYDATGANAEL
HHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCC
TDGFVNYPRSIRGVEVAIFFRQLDECTCKVGFRSKGAVNVAGFAAALGGGGHHNAAGCTV
CCHHHCCCCCCCHHHHHHHHHHHHHHHEECCCCCCCCEEHHHHHHHHCCCCCCCCCCCEE
SGGLEEIKSRVYDIVNASL
CCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TETIQNIVDEIRANGSFLLTTHESPDGDAVGSSLALASFLRRIGKQVCVHFRDPVPELF
CHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
AFLPGSDTVNPHIPEQDFNVSFVLDVGEFRRAGDEFCSFRRGGTLINLDHHLSCECFGSH
HCCCCCCCCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHCCCCEEEECCCCEEEEECCC
NLIDSGAAATGILVYRIITAFGYAMDRDTALCLYTAIISDTGSFRYSNANREAFTVAGEM
CCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEECCCCCHHHHHHHHH
IEQGVNAWSVAERLYESQPQKRLELLTRALATLEVICGGRAASLTVTSDMYDATGANAEL
HHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCC
TDGFVNYPRSIRGVEVAIFFRQLDECTCKVGFRSKGAVNVAGFAAALGGGGHHNAAGCTV
CCHHHCCCCCCCHHHHHHHHHHHHHHHEECCCCCCCCEEHHHHHHHHCCCCCCCCCCCEE
SGGLEEIKSRVYDIVNASL
CCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]