Definition Pelobacter propionicus DSM 2379 chromosome, complete genome.
Accession NC_008609
Length 4,008,000

Click here to switch to the map view.

The map label for this gene is 118579367

Identifier: 118579367

GI number: 118579367

Start: 979994

End: 980584

Strand: Direct

Name: 118579367

Synonym: Ppro_0930

Alternate gene names: NA

Gene position: 979994-980584 (Clockwise)

Preceding gene: 118579366

Following gene: 118579368

Centisome position: 24.45

GC content: 60.58

Gene sequence:

>591_bases
ATGCTGGTGACCTGCAGGGCTCTGAAAACCGCCGGCTGGCTGGCAATGGCAAGCGCCTTTGCCTCCATTCCGCTGACATA
CGCCTCCTTCCGGCTGGATGGCGGCGCCGATCCGGTCACCAACGCTATCCAGATCGCTATTCAGTTGGTCGGGATGACGC
TGTTTGTTGCCATCACCCTGTTGCTCAGGAGGCTGCTCAACGCCAGGTTCGGATTCCATGACGCGGACAGGAGCATCGAC
CTGATGGTCATGGCGAATGTGGTGGCCTCCATTGCCTCTGTCGTGGCGCTCTGCTTCCCGCAGTGGAAGGAAATGTTGGG
GGGTGCATCCCTCGTGATCGTGGTCTTCCAGGGGATAGTGCAGGTTCGATTCGGCCTTCGGCTGCTCAGGCTGCAGGATG
ACCTGGACGGGATGCTGCGCCCCTTCTGCTATCTGAATGTGGCAACCGGTGTCTGCATCGCCTCGCTCGTGCTGATTGTC
GTCGGGGTAGTGGTGAGCGCCATAGCCGACCTGATGCTGGGGACGATATTCTTTCACCTAGCCAAACTGGAGCGGGAACC
GGATTCCCGCGGGACCGGCGCACAGCCATAG

Upstream 100 bases:

>100_bases
GGGGGGAATTGCTGCCGTTGATCCGATTGGCGGCTGCACCTGGCTCCCAATCCCCGCCCGTCCAGGGAGGGGAGCTGTAT
TACCTAACAGTTGAGGGGGG

Downstream 100 bases:

>100_bases
AGATTGGCACTGTTCGTTGCCCCAAGCCTGCGCAAGAAAGTGAATCCATAATGCCGAAAAAACGTGACGCAGCCCGCGCC
AACCTGGAAACCCTGTACCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 196; Mature: 196

Protein sequence:

>196_residues
MLVTCRALKTAGWLAMASAFASIPLTYASFRLDGGADPVTNAIQIAIQLVGMTLFVAITLLLRRLLNARFGFHDADRSID
LMVMANVVASIASVVALCFPQWKEMLGGASLVIVVFQGIVQVRFGLRLLRLQDDLDGMLRPFCYLNVATGVCIASLVLIV
VGVVVSAIADLMLGTIFFHLAKLEREPDSRGTGAQP

Sequences:

>Translated_196_residues
MLVTCRALKTAGWLAMASAFASIPLTYASFRLDGGADPVTNAIQIAIQLVGMTLFVAITLLLRRLLNARFGFHDADRSID
LMVMANVVASIASVVALCFPQWKEMLGGASLVIVVFQGIVQVRFGLRLLRLQDDLDGMLRPFCYLNVATGVCIASLVLIV
VGVVVSAIADLMLGTIFFHLAKLEREPDSRGTGAQP
>Mature_196_residues
MLVTCRALKTAGWLAMASAFASIPLTYASFRLDGGADPVTNAIQIAIQLVGMTLFVAITLLLRRLLNARFGFHDADRSID
LMVMANVVASIASVVALCFPQWKEMLGGASLVIVVFQGIVQVRFGLRLLRLQDDLDGMLRPFCYLNVATGVCIASLVLIV
VGVVVSAIADLMLGTIFFHLAKLEREPDSRGTGAQP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21082; Mature: 21082

Theoretical pI: Translated: 8.34; Mature: 8.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVTCRALKTAGWLAMASAFASIPLTYASFRLDGGADPVTNAIQIAIQLVGMTLFVAITL
CEEEHHHHHHHHHHHHHHHHHHCCHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH
LLRRLLNARFGFHDADRSIDLMVMANVVASIASVVALCFPQWKEMLGGASLVIVVFQGIV
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
QVRFGLRLLRLQDDLDGMLRPFCYLNVATGVCIASLVLIVVGVVVSAIADLMLGTIFFHL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AKLEREPDSRGTGAQP
HHHHCCCCCCCCCCCC
>Mature Secondary Structure
MLVTCRALKTAGWLAMASAFASIPLTYASFRLDGGADPVTNAIQIAIQLVGMTLFVAITL
CEEEHHHHHHHHHHHHHHHHHHCCHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH
LLRRLLNARFGFHDADRSIDLMVMANVVASIASVVALCFPQWKEMLGGASLVIVVFQGIV
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
QVRFGLRLLRLQDDLDGMLRPFCYLNVATGVCIASLVLIVVGVVVSAIADLMLGTIFFHL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AKLEREPDSRGTGAQP
HHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA