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The map label for this gene is dsbD [C]

Identifier: 118579291

GI number: 118579291

Start: 899202

End: 899888

Strand: Reverse

Name: dsbD [C]

Synonym: Ppro_0854

Alternate gene names: 118579291

Gene position: 899888-899202 (Counterclockwise)

Preceding gene: 118579292

Following gene: 118579288

Centisome position: 22.45

GC content: 65.07

Gene sequence:

>687_bases
ATGAGCCTGCTGGACAACGTGGAGCAGATCATCAGCCTTTACCCACTGCTGGCTTTCGTCGCGGTCTTTTGTGCCGGGGT
GCTGTCGTCGGCCTCCCCCTGCGTGCTGGCCACCATTCCGCTGGTGGTCGGATTCGTGGGAGGTTACAGCGATGGCGACC
GTGGCAAGGCATTCCGCTACTCGCTGGCCTTCATCCTGGGGCTGTCGCTCACCTTCACCGCCTTCGGCGCTGCGGCGGGT
CTCTTGGGCACCATGTTCGGGGCACTGGGCGGCCCCTGGCACCTGGTCGCCGGCGTCATCGCCCTGGCCATGGGAGGACA
GATGATGGGGCTGTACGAGATCCGCCTGCCGGTCAGGCGCGACTACAAGCCCAAACAGGGTGGCCTGGCCGGAGCATTTC
TGCTGGGGCTGTTCTTCGGGGTGGTCTCGTCCCCTTGCGCCACGCCGGTGCTGGTGCTGCTGCTGACCCTGGTTGCCGGC
AAAGGGCAGGTGCTGTACGGCACGGCCCTACTGTTCTGCTACGCCATCGGCCACTGCCTGCTGATGCTGTTCGCCGGCAC
CTTCACCGGATTCGTGGAGGGGTTCGCCAAGGCCCGCGGCGTTGTCAACTTCTCGTCATGGTCCAAACGAATCAGCGGCG
GCGTGATTGCGCTGGCGGGTGGCTGGTTTGTGTGGCAGGGGATGTAA

Upstream 100 bases:

>100_bases
CCCAGATCTTCTTCAACGCCGCAGGCAAAGAGGTCAAGCGCCACATGGGCTTCATGGACAAGGCCGACATACTGAAGGAA
CTGAAGGCACTGGGTTTGAA

Downstream 100 bases:

>100_bases
TCCCCGTTTCACATCATAGATGCTATCAGGGCGGCAAGAAAGCAGGCAACGGAGGCCCTCAACCGATCAGGACCATCCCC
GCCATCATCCCCATGGGGAC

Product: cytochrome c biogenesis protein, transmembrane region

Products: DsbDoxidized; DsbGreduced [C]

Alternate protein names: NA

Number of amino acids: Translated: 228; Mature: 227

Protein sequence:

>228_residues
MSLLDNVEQIISLYPLLAFVAVFCAGVLSSASPCVLATIPLVVGFVGGYSDGDRGKAFRYSLAFILGLSLTFTAFGAAAG
LLGTMFGALGGPWHLVAGVIALAMGGQMMGLYEIRLPVRRDYKPKQGGLAGAFLLGLFFGVVSSPCATPVLVLLLTLVAG
KGQVLYGTALLFCYAIGHCLLMLFAGTFTGFVEGFAKARGVVNFSSWSKRISGGVIALAGGWFVWQGM

Sequences:

>Translated_228_residues
MSLLDNVEQIISLYPLLAFVAVFCAGVLSSASPCVLATIPLVVGFVGGYSDGDRGKAFRYSLAFILGLSLTFTAFGAAAG
LLGTMFGALGGPWHLVAGVIALAMGGQMMGLYEIRLPVRRDYKPKQGGLAGAFLLGLFFGVVSSPCATPVLVLLLTLVAG
KGQVLYGTALLFCYAIGHCLLMLFAGTFTGFVEGFAKARGVVNFSSWSKRISGGVIALAGGWFVWQGM
>Mature_227_residues
SLLDNVEQIISLYPLLAFVAVFCAGVLSSASPCVLATIPLVVGFVGGYSDGDRGKAFRYSLAFILGLSLTFTAFGAAAGL
LGTMFGALGGPWHLVAGVIALAMGGQMMGLYEIRLPVRRDYKPKQGGLAGAFLLGLFFGVVSSPCATPVLVLLLTLVAGK
GQVLYGTALLFCYAIGHCLLMLFAGTFTGFVEGFAKARGVVNFSSWSKRISGGVIALAGGWFVWQGM

Specific function: Could be involved in cytochrome c synthesis [H]

COG id: COG0785

COG function: function code O; Cytochrome c biogenesis protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DsbD family [H]

Homologues:

Organism=Escherichia coli, GI1790578, Length=193, Percent_Identity=31.0880829015544, Blast_Score=63, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003834 [H]

Pfam domain/function: PF02683 DsbD [H]

EC number: 1.8.1.8 [C]

Molecular weight: Translated: 23753; Mature: 23621

Theoretical pI: Translated: 9.23; Mature: 9.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLLDNVEQIISLYPLLAFVAVFCAGVLSSASPCVLATIPLVVGFVGGYSDGDRGKAFRY
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHH
SLAFILGLSLTFTAFGAAAGLLGTMFGALGGPWHLVAGVIALAMGGQMMGLYEIRLPVRR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHEEECCCCC
DYKPKQGGLAGAFLLGLFFGVVSSPCATPVLVLLLTLVAGKGQVLYGTALLFCYAIGHCL
CCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
LMLFAGTFTGFVEGFAKARGVVNFSSWSKRISGGVIALAGGWFVWQGM
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCEEEEECCEEEECCC
>Mature Secondary Structure 
SLLDNVEQIISLYPLLAFVAVFCAGVLSSASPCVLATIPLVVGFVGGYSDGDRGKAFRY
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHH
SLAFILGLSLTFTAFGAAAGLLGTMFGALGGPWHLVAGVIALAMGGQMMGLYEIRLPVRR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHEEECCCCC
DYKPKQGGLAGAFLLGLFFGVVSSPCATPVLVLLLTLVAGKGQVLYGTALLFCYAIGHCL
CCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
LMLFAGTFTGFVEGFAKARGVVNFSSWSKRISGGVIALAGGWFVWQGM
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCEEEEECCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DsbGoxidized; DsbDreduced/thiol:disulfide reductase [C]

Specific reaction: DsbDreduced/thiol:disulfide reductase + DsbCoxidized = DsbDoxidized + DsbCreduced DsbGoxidized + DsbDreduced/thiol:disulfide reductase = DsbGreduced + DsbDoxidized [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]