| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
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The map label for this gene is 118579265
Identifier: 118579265
GI number: 118579265
Start: 876147
End: 876599
Strand: Direct
Name: 118579265
Synonym: Ppro_0828
Alternate gene names: NA
Gene position: 876147-876599 (Clockwise)
Preceding gene: 118579264
Following gene: 118579266
Centisome position: 21.86
GC content: 58.06
Gene sequence:
>453_bases ATGAAAAGAGAATTCGTATTTGTTGTTGCAGGGATTGCGCTGAGCTGCTCGCTGTCATGGGGCCAGGAAACGACGTGGCG CAAGGACGTGAAACCGCTGTTCGATGCCAGGTGCGCCGCGTGTCACTCCGATGTCTCCGCTCCCGAACACGATGCGTTCA AGGAGAAGAAGCAGAGGTGGCTGGCAAACGGGCAGGGAATGCGGATGAACAGCTACAGCCATCTGATTTACTACACTGCC TGGCCCGGCACCGGCGCCCTGATGCGCAGACTCGATGACGGCAGGAACCTGAAGGGAGGGAAAGCCGGGAACATGTATCA GTTCCTGGGGGCGACGGAGGCGGAACGCCAGAAGAACCTCGCCGTTTTCAAGGCATGGGTCGGAACATGGGTCGTGAAGC GGTGGCCTGACGTTACCAAGGACGAGTTGAACGGCATCAGGGTGAAATACTGA
Upstream 100 bases:
>100_bases GGGTCATGGACTACCGGAGGGCGTATGGCGATGACTGAGAAAATCCCGAACGGGCAACGGAGTACCGACCATCTTCATTC AACACAAGGAGGCTGAACCG
Downstream 100 bases:
>100_bases TTGTGAACATCAAAAAACTAATCATACATGATCGGAAGCCGGTCATCGGTCCGGACGACCTGAGACGCAGATTTCCTCTT TCAGGAGAAGACGTCGCGCG
Product: cytochrome c family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 150; Mature: 150
Protein sequence:
>150_residues MKREFVFVVAGIALSCSLSWGQETTWRKDVKPLFDARCAACHSDVSAPEHDAFKEKKQRWLANGQGMRMNSYSHLIYYTA WPGTGALMRRLDDGRNLKGGKAGNMYQFLGATEAERQKNLAVFKAWVGTWVVKRWPDVTKDELNGIRVKY
Sequences:
>Translated_150_residues MKREFVFVVAGIALSCSLSWGQETTWRKDVKPLFDARCAACHSDVSAPEHDAFKEKKQRWLANGQGMRMNSYSHLIYYTA WPGTGALMRRLDDGRNLKGGKAGNMYQFLGATEAERQKNLAVFKAWVGTWVVKRWPDVTKDELNGIRVKY >Mature_150_residues MKREFVFVVAGIALSCSLSWGQETTWRKDVKPLFDARCAACHSDVSAPEHDAFKEKKQRWLANGQGMRMNSYSHLIYYTA WPGTGALMRRLDDGRNLKGGKAGNMYQFLGATEAERQKNLAVFKAWVGTWVVKRWPDVTKDELNGIRVKY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17120; Mature: 17120
Theoretical pI: Translated: 10.15; Mature: 10.15
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKREFVFVVAGIALSCSLSWGQETTWRKDVKPLFDARCAACHSDVSAPEHDAFKEKKQRW CCCEEEEEEEEEEHEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH LANGQGMRMNSYSHLIYYTAWPGTGALMRRLDDGRNLKGGKAGNMYQFLGATEAERQKNL HCCCCCCEECCCCEEEEEEECCCHHHHHHHHCCCCCCCCCCCCCCHHHHCCCHHHHHHHH AVFKAWVGTWVVKRWPDVTKDELNGIRVKY HHHHHHHHHHHHHCCCCCCCHHCCCEEECC >Mature Secondary Structure MKREFVFVVAGIALSCSLSWGQETTWRKDVKPLFDARCAACHSDVSAPEHDAFKEKKQRW CCCEEEEEEEEEEHEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH LANGQGMRMNSYSHLIYYTAWPGTGALMRRLDDGRNLKGGKAGNMYQFLGATEAERQKNL HCCCCCCEECCCCEEEEEEECCCHHHHHHHHCCCCCCCCCCCCCCHHHHCCCHHHHHHHH AVFKAWVGTWVVKRWPDVTKDELNGIRVKY HHHHHHHHHHHHHCCCCCCCHHCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA