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The map label for this gene is rpfG [H]

Identifier: 118579234

GI number: 118579234

Start: 842992

End: 843783

Strand: Direct

Name: rpfG [H]

Synonym: Ppro_0796

Alternate gene names: 118579234

Gene position: 842992-843783 (Clockwise)

Preceding gene: 118579233

Following gene: 118579235

Centisome position: 21.03

GC content: 61.49

Gene sequence:

>792_bases
ATGTTGAATATGGTACGGGCGACAACGTCGCTTTTTGTTATGAAACGCAACCAAAAGAAGCGCATGCGGAACAGGGGGGA
AAGCCTCGACAGTTTCACGTCGCTGCATCATCTTGCCGAGGCGCTGGGCAATGCGGTCGATGCCCGTGATTCCCAGCTGT
ACCGCCATTCCCGGGATGTGGCCGAGGTTTCCTGCGTGCTGGCCCATGCCATGGGGTTTTCCCGGGAGGAGATAGATGTC
ATTCACATCGCCGGACACCTGCACGACATCGGCAAGATCGGTATTCCCGATGTCGTGCTGAAAAAAAAAGGCCCCCTGGA
CGCAGATGAGTGGCGCTGGATGAGGCTGCATCCCGGAATCGGGGCGGAGATCGTGCGGCCGGTGCCGGCCCTGAACGGTC
CGGGAGGGGTGGCCGACATAATCCTGCGTCACCACGAGCGGTTCGACGGCAAAGGCTACCCCGATGGCCTGGGGGACGAC
CAGATTCCCCGCGGCGCTCGCATCGTGGCGGTGGCCGACACCCTCTCGGCGCTCCTGCGCAACCGCTCCTACCGTGCGGG
ATGCTCCTTCGACCTGGCCTGTGCCGAAATCCGGCGCTGTTCCGGTTCCCAGTTTGATCCGGTGGTGGTGAAGGTTCTGG
AAAAAAACCGGAAAAAGGTTGCCGGATGTCTGGACGCCGCCGAGGAACTCGCCGTCTCGGCCTGCTCTCCCTACGAGCCT
CCTTCTCACGGGTTGTTTGTCCCCGGCGAGATGCTTCTTCAGGAGAGCGCCTCTCTCCCGCATGTGCTGTAA

Upstream 100 bases:

>100_bases
GCGCCTGTCTTCCTCCCGGCAGACCGTTGGAGCGACTGATCGTCGATGCCGATTGTGCCTTGTACCGCGCCAAGCAGGGG
GGGAGGAACAGGGTGTGCCT

Downstream 100 bases:

>100_bases
TTTCCCCTGCCTGTTCCTCTCCCGTTGCGGGAAGGAGCGGGCAGACAAAACGGAAGTGGCAGGGGAAAAACGGTCGTCGC
CGCGGAGACACCTATCAGAA

Product: metal dependent phosphohydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 263; Mature: 263

Protein sequence:

>263_residues
MLNMVRATTSLFVMKRNQKKRMRNRGESLDSFTSLHHLAEALGNAVDARDSQLYRHSRDVAEVSCVLAHAMGFSREEIDV
IHIAGHLHDIGKIGIPDVVLKKKGPLDADEWRWMRLHPGIGAEIVRPVPALNGPGGVADIILRHHERFDGKGYPDGLGDD
QIPRGARIVAVADTLSALLRNRSYRAGCSFDLACAEIRRCSGSQFDPVVVKVLEKNRKKVAGCLDAAEELAVSACSPYEP
PSHGLFVPGEMLLQESASLPHVL

Sequences:

>Translated_263_residues
MLNMVRATTSLFVMKRNQKKRMRNRGESLDSFTSLHHLAEALGNAVDARDSQLYRHSRDVAEVSCVLAHAMGFSREEIDV
IHIAGHLHDIGKIGIPDVVLKKKGPLDADEWRWMRLHPGIGAEIVRPVPALNGPGGVADIILRHHERFDGKGYPDGLGDD
QIPRGARIVAVADTLSALLRNRSYRAGCSFDLACAEIRRCSGSQFDPVVVKVLEKNRKKVAGCLDAAEELAVSACSPYEP
PSHGLFVPGEMLLQESASLPHVL
>Mature_263_residues
MLNMVRATTSLFVMKRNQKKRMRNRGESLDSFTSLHHLAEALGNAVDARDSQLYRHSRDVAEVSCVLAHAMGFSREEIDV
IHIAGHLHDIGKIGIPDVVLKKKGPLDADEWRWMRLHPGIGAEIVRPVPALNGPGGVADIILRHHERFDGKGYPDGLGDD
QIPRGARIVAVADTLSALLRNRSYRAGCSFDLACAEIRRCSGSQFDPVVVKVLEKNRKKVAGCLDAAEELAVSACSPYEP
PSHGLFVPGEMLLQESASLPHVL

Specific function: Positively regulates the synthesis of extracellular enzymes and extracellular polysaccharides. The cell-cell signaling system encoded by rpf genes is required for full virulence and is implicated in regulation of the formation and dispersal of biofilms [H

COG id: COG2206

COG function: function code T; HD-GYP domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR003607
- InterPro:   IPR001789 [H]

Pfam domain/function: PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 28820; Mature: 28820

Theoretical pI: Translated: 7.91; Mature: 7.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNMVRATTSLFVMKRNQKKRMRNRGESLDSFTSLHHLAEALGNAVDARDSQLYRHSRDV
CCCHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
AEVSCVLAHAMGFSREEIDVIHIAGHLHDIGKIGIPDVVLKKKGPLDADEWRWMRLHPGI
HHHHHHHHHHHCCCCCCEEEEEEEHHHHHHCCCCCCCEEECCCCCCCCCCCEEEEECCCC
GAEIVRPVPALNGPGGVADIILRHHERFDGKGYPDGLGDDQIPRGARIVAVADTLSALLR
CHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHH
NRSYRAGCSFDLACAEIRRCSGSQFDPVVVKVLEKNRKKVAGCLDAAEELAVSACSPYEP
CCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PSHGLFVPGEMLLQESASLPHVL
CCCCEECCHHHHHHHHCCCCCCC
>Mature Secondary Structure
MLNMVRATTSLFVMKRNQKKRMRNRGESLDSFTSLHHLAEALGNAVDARDSQLYRHSRDV
CCCHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
AEVSCVLAHAMGFSREEIDVIHIAGHLHDIGKIGIPDVVLKKKGPLDADEWRWMRLHPGI
HHHHHHHHHHHCCCCCCEEEEEEEHHHHHHCCCCCCCEEECCCCCCCCCCCEEEEECCCC
GAEIVRPVPALNGPGGVADIILRHHERFDGKGYPDGLGDDQIPRGARIVAVADTLSALLR
CHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHH
NRSYRAGCSFDLACAEIRRCSGSQFDPVVVKVLEKNRKKVAGCLDAAEELAVSACSPYEP
CCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PSHGLFVPGEMLLQESASLPHVL
CCCCEECCHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11123673 [H]