| Definition | Pelobacter propionicus DSM 2379 chromosome, complete genome. |
|---|---|
| Accession | NC_008609 |
| Length | 4,008,000 |
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The map label for this gene is kefB [H]
Identifier: 118579222
GI number: 118579222
Start: 832320
End: 834317
Strand: Reverse
Name: kefB [H]
Synonym: Ppro_0784
Alternate gene names: 118579222
Gene position: 834317-832320 (Counterclockwise)
Preceding gene: 118579223
Following gene: 118579221
Centisome position: 20.82
GC content: 62.96
Gene sequence:
>1998_bases GTGCCTTACGAGACCCTGCAAGACATCGAGATTCTCTTCGGCCTGGCACTGATAACGGTGATCCTCTTCCGTCGCCTGAT GTTCCCCTCCATCGTCGGCTTCATGGCCACCGGCATCCTGGCCGGCCCCCACGCCCTGGGATTCATCAAAAACAGCCACC AGGTGGAACAGATGGCCGAAATCGGCGTGGTGCTGCTCCTGTTCACCATCGGCATCGAGCTTTCCCTGAAGGAACTGATG CGCATCAGGCATCTGGTGCTTTTGGGCGGCGGGCTGCAGGTTCTGGTCACCATCCTGGTAGTGGCAGGCGTGGCCATGCT TGGCGGCTTCCCGGCCAACCAGTCGGTCTTCTTCGGGTTTCTGGTGGCCCTCTCCAGCACCGCCATCCTGATGAAGCTCT TGATCGACAGCGGCCAGGCGGACACGCCCCACGGCAAAATGGCCATGGGCATCCTGATCTTCCAGGACCTGTGCATCGTA CCGCTGATGCTGCTGACCCCGCTCCTGGCGGGCGGAGGCGACGGAGCACGGGAGATCGTGCTGATCGGCGCCAAGGCTGC AGCCGTCGTGGTCATGGCCCATTACGGCGCCCGTTTCCTGGTGCCGTGGATATTCAAACAGGTGGTAAGGACCAGAAGCA GGGAACTGTTCATCCTGACCATCATCTTCATCGGACTGGGCACGGCCTGGCTGACCGCCCTGGCCGGCCTCTCCCTGGCG CTGGGGGCGTTCATCGCCGGCCTGGCCATCTCGGAATCGGAATACAGCCACCAGGCGTTGGGCGACATCATCCCCTTCCG CGAGGCCTTCATGAGCCTCTTCTTTATCTCGGTGGGCATGCTGCTTGACCCTGCCATCCTGCTGAAGCATCCACTGCTGA TCGCCTCGCTGGTGGCAGCCATCCTGCTTATCAAGACCCTAGTCACCAGCGGGGCTGGCATGGCCCTGGGAGTTTCCACC CGCATCACCGTTATCACGGCGCTCTCCCTGGCCCAGATCGGCGAGTTCTCCTTCGTGCTCTCCCAGAGCGGCGTCAATCT GGGAATCCTCACCCCGGACATGTACCAGATATTCCTAGCCGCCTCCATCGCCACCATGGGACTGACACCGGCCTGCCTCG GATTCGCCCCAGCTGTGGCGGAGCGCATCAGCACCCTGCTCCCCCGCCGCTGGAGCCGTGGCCGGGGCGTCCTTGCCAGC CACGACCGACCGGTAGCCATGAGCGATCACGTCATCATCGTCGGCTACGGCGTCAACGGCAGAAACCTTTCCCGGGTGCT GAAGAGCCAGAAGATCCAGCACCTGGTCATTGAGACAAACCCTTTCACGGTCAGGAGCGAGGCCAGGAAGGGACACAAGA TCCACTTCGGTGACGCATCAAAACCAGAGGTGCTTGAGCATGCCCATGTGGACAGGGCCCGCGTCCTGGTGGTGGCTATC TCCGATGCCGCGGCCAGCAGGAGGGTCGCCGGTATGGCCCGGCAGATGAACCCGGCGCTGCACATCATCGTCAGGACCCG CTATGTCCTGGAGGTAGAACCGCTGTTCAAGCTGGGGGTCAACGAGGTCGTGCCGGAAGAGTTCGAGACATCGGTGGAAA TTTTTTCCCGGGTACTGAGGAACTATCTCGTCCCCCAACATGACGTCGACCGCTGCATCGCCGAGGTGCGCAGCGACGGC TACGACATGCTGCGTTCCTTAAGCAGACGCCACAGCCACGCCATGGGCATCAGCGGCTATCTCTCCGGCGCCGAGATAGG AACCTTCCGCGTGCGGGAGGGGTCGCAACTGGAGGCCCGCAGCCTGCGCGAGGGGACCATCAGGAACATGTCCGGGGCAA CGGTGCTGGTCATCAAGCGGGGTGAGGAGGTCGTGCCCAACCCCGATCCGGTCTGGGAACTGCGCAGGGATGACCTGGTG CTGCTTTTAGGCAGTGCGGAGCAACTGGCGGCGGCGGGCCGACTGTTCGAGCCGACTCCGCACCTGCGGCAGGCCTAG
Upstream 100 bases:
>100_bases GCGTCCCACAAGGACGCCCCTTTCACGGCACAATCCATGATGCGACGCGGAGCAGTCGCCTGATTATTGTCCCAACACGG TGACAGGAGCACACTCTTTC
Downstream 100 bases:
>100_bases ACGGACAGGCTGCCCCCAGACGTGGGTGAGCGACATCGCCAACAACGCGCATGCCAGGCGACCGGGAGGCGTCTTCATGG ACCGAACACTACTAAATACG
Product: sodium/hydrogen exchanger
Products: NA
Alternate protein names: K(+)/H(+) antiporter; NEM-activatable K(+)/H(+) antiporter [H]
Number of amino acids: Translated: 665; Mature: 664
Protein sequence:
>665_residues MPYETLQDIEILFGLALITVILFRRLMFPSIVGFMATGILAGPHALGFIKNSHQVEQMAEIGVVLLLFTIGIELSLKELM RIRHLVLLGGGLQVLVTILVVAGVAMLGGFPANQSVFFGFLVALSSTAILMKLLIDSGQADTPHGKMAMGILIFQDLCIV PLMLLTPLLAGGGDGAREIVLIGAKAAAVVVMAHYGARFLVPWIFKQVVRTRSRELFILTIIFIGLGTAWLTALAGLSLA LGAFIAGLAISESEYSHQALGDIIPFREAFMSLFFISVGMLLDPAILLKHPLLIASLVAAILLIKTLVTSGAGMALGVST RITVITALSLAQIGEFSFVLSQSGVNLGILTPDMYQIFLAASIATMGLTPACLGFAPAVAERISTLLPRRWSRGRGVLAS HDRPVAMSDHVIIVGYGVNGRNLSRVLKSQKIQHLVIETNPFTVRSEARKGHKIHFGDASKPEVLEHAHVDRARVLVVAI SDAAASRRVAGMARQMNPALHIIVRTRYVLEVEPLFKLGVNEVVPEEFETSVEIFSRVLRNYLVPQHDVDRCIAEVRSDG YDMLRSLSRRHSHAMGISGYLSGAEIGTFRVREGSQLEARSLREGTIRNMSGATVLVIKRGEEVVPNPDPVWELRRDDLV LLLGSAEQLAAAGRLFEPTPHLRQA
Sequences:
>Translated_665_residues MPYETLQDIEILFGLALITVILFRRLMFPSIVGFMATGILAGPHALGFIKNSHQVEQMAEIGVVLLLFTIGIELSLKELM RIRHLVLLGGGLQVLVTILVVAGVAMLGGFPANQSVFFGFLVALSSTAILMKLLIDSGQADTPHGKMAMGILIFQDLCIV PLMLLTPLLAGGGDGAREIVLIGAKAAAVVVMAHYGARFLVPWIFKQVVRTRSRELFILTIIFIGLGTAWLTALAGLSLA LGAFIAGLAISESEYSHQALGDIIPFREAFMSLFFISVGMLLDPAILLKHPLLIASLVAAILLIKTLVTSGAGMALGVST RITVITALSLAQIGEFSFVLSQSGVNLGILTPDMYQIFLAASIATMGLTPACLGFAPAVAERISTLLPRRWSRGRGVLAS HDRPVAMSDHVIIVGYGVNGRNLSRVLKSQKIQHLVIETNPFTVRSEARKGHKIHFGDASKPEVLEHAHVDRARVLVVAI SDAAASRRVAGMARQMNPALHIIVRTRYVLEVEPLFKLGVNEVVPEEFETSVEIFSRVLRNYLVPQHDVDRCIAEVRSDG YDMLRSLSRRHSHAMGISGYLSGAEIGTFRVREGSQLEARSLREGTIRNMSGATVLVIKRGEEVVPNPDPVWELRRDDLV LLLGSAEQLAAAGRLFEPTPHLRQA >Mature_664_residues PYETLQDIEILFGLALITVILFRRLMFPSIVGFMATGILAGPHALGFIKNSHQVEQMAEIGVVLLLFTIGIELSLKELMR IRHLVLLGGGLQVLVTILVVAGVAMLGGFPANQSVFFGFLVALSSTAILMKLLIDSGQADTPHGKMAMGILIFQDLCIVP LMLLTPLLAGGGDGAREIVLIGAKAAAVVVMAHYGARFLVPWIFKQVVRTRSRELFILTIIFIGLGTAWLTALAGLSLAL GAFIAGLAISESEYSHQALGDIIPFREAFMSLFFISVGMLLDPAILLKHPLLIASLVAAILLIKTLVTSGAGMALGVSTR ITVITALSLAQIGEFSFVLSQSGVNLGILTPDMYQIFLAASIATMGLTPACLGFAPAVAERISTLLPRRWSRGRGVLASH DRPVAMSDHVIIVGYGVNGRNLSRVLKSQKIQHLVIETNPFTVRSEARKGHKIHFGDASKPEVLEHAHVDRARVLVVAIS DAAASRRVAGMARQMNPALHIIVRTRYVLEVEPLFKLGVNEVVPEEFETSVEIFSRVLRNYLVPQHDVDRCIAEVRSDGY DMLRSLSRRHSHAMGISGYLSGAEIGTFRVREGSQLEARSLREGTIRNMSGATVLVIKRGEEVVPNPDPVWELRRDDLVL LLGSAEQLAAAGRLFEPTPHLRQA
Specific function: Transport system that facilitates potassium-efflux, possibly by potassium-proton antiport [H]
COG id: COG0475
COG function: function code P; Kef-type K+ transport systems, membrane components
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 RCK N-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI157388921, Length=358, Percent_Identity=28.2122905027933, Blast_Score=107, Evalue=4e-23, Organism=Escherichia coli, GI1786685, Length=527, Percent_Identity=33.7760910815939, Blast_Score=253, Evalue=2e-68, Organism=Escherichia coli, GI1789749, Length=565, Percent_Identity=30.7964601769912, Blast_Score=235, Evalue=5e-63, Organism=Escherichia coli, GI1786232, Length=535, Percent_Identity=31.0280373831776, Blast_Score=213, Evalue=3e-56,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006153 - InterPro: IPR020884 - InterPro: IPR004771 - InterPro: IPR016040 - InterPro: IPR003148 [H]
Pfam domain/function: PF00999 Na_H_Exchanger; PF02254 TrkA_N [H]
EC number: NA
Molecular weight: Translated: 72067; Mature: 71936
Theoretical pI: Translated: 9.47; Mature: 9.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPYETLQDIEILFGLALITVILFRRLMFPSIVGFMATGILAGPHALGFIKNSHQVEQMAE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHH IGVVLLLFTIGIELSLKELMRIRHLVLLGGGLQVLVTILVVAGVAMLGGFPANQSVFFGF HHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHH LVALSSTAILMKLLIDSGQADTPHGKMAMGILIFQDLCIVPLMLLTPLLAGGGDGAREIV HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEE LIGAKAAAVVVMAHYGARFLVPWIFKQVVRTRSRELFILTIIFIGLGTAWLTALAGLSLA EEECHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH LGAFIAGLAISESEYSHQALGDIIPFREAFMSLFFISVGMLLDPAILLKHPLLIASLVAA HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH ILLIKTLVTSGAGMALGVSTRITVITALSLAQIGEFSFVLSQSGVNLGILTPDMYQIFLA HHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHCCHHEEEECCCCEEEEECHHHHHHHHH ASIATMGLTPACLGFAPAVAERISTLLPRRWSRGRGVLASHDRPVAMSDHVIIVGYGVNG HHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHCCCCCEEECCCCCEEECCCEEEEEECCCC RNLSRVLKSQKIQHLVIETNPFTVRSEARKGHKIHFGDASKPEVLEHAHVDRARVLVVAI HHHHHHHHHHCCCEEEEECCCCEEEHHCCCCCEEECCCCCCCHHHHHHCCCCEEEEEEEE SDAAASRRVAGMARQMNPALHIIVRTRYVLEVEPLFKLGVNEVVPEEFETSVEIFSRVLR CCHHHHHHHHHHHHHCCCCEEEEEEEEEEEEECHHHHCCCHHCCCHHHHHHHHHHHHHHH NYLVPQHDVDRCIAEVRSDGYDMLRSLSRRHSHAMGISGYLSGAEIGTFRVREGSQLEAR HHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHCCCCCCEEEEEECCCCCHHHH SLREGTIRNMSGATVLVIKRGEEVVPNPDPVWELRRDDLVLLLGSAEQLAAAGRLFEPTP HHHHCCCCCCCCCEEEEEECCCCCCCCCCCCHHCCCCCEEEEECCHHHHHHCCCCCCCCC HLRQA HHCCC >Mature Secondary Structure PYETLQDIEILFGLALITVILFRRLMFPSIVGFMATGILAGPHALGFIKNSHQVEQMAE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHH IGVVLLLFTIGIELSLKELMRIRHLVLLGGGLQVLVTILVVAGVAMLGGFPANQSVFFGF HHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHH LVALSSTAILMKLLIDSGQADTPHGKMAMGILIFQDLCIVPLMLLTPLLAGGGDGAREIV HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEE LIGAKAAAVVVMAHYGARFLVPWIFKQVVRTRSRELFILTIIFIGLGTAWLTALAGLSLA EEECHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH LGAFIAGLAISESEYSHQALGDIIPFREAFMSLFFISVGMLLDPAILLKHPLLIASLVAA HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH ILLIKTLVTSGAGMALGVSTRITVITALSLAQIGEFSFVLSQSGVNLGILTPDMYQIFLA HHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHCCHHEEEECCCCEEEEECHHHHHHHHH ASIATMGLTPACLGFAPAVAERISTLLPRRWSRGRGVLASHDRPVAMSDHVIIVGYGVNG HHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHCCCCCEEECCCCCEEECCCEEEEEECCCC RNLSRVLKSQKIQHLVIETNPFTVRSEARKGHKIHFGDASKPEVLEHAHVDRARVLVVAI HHHHHHHHHHCCCEEEEECCCCEEEHHCCCCCEEECCCCCCCHHHHHHCCCCEEEEEEEE SDAAASRRVAGMARQMNPALHIIVRTRYVLEVEPLFKLGVNEVVPEEFETSVEIFSRVLR CCHHHHHHHHHHHHHCCCCEEEEEEEEEEEEECHHHHCCCHHCCCHHHHHHHHHHHHHHH NYLVPQHDVDRCIAEVRSDGYDMLRSLSRRHSHAMGISGYLSGAEIGTFRVREGSQLEAR HHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHCCCCCCEEEEEECCCCCHHHH SLREGTIRNMSGATVLVIKRGEEVVPNPDPVWELRRDDLVLLLGSAEQLAAAGRLFEPTP HHHHCCCCCCCCCEEEEEECCCCCCCCCCCCHHCCCCCEEEEECCHHHHHHCCCCCCCCC HLRQA HHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA