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The map label for this gene is ydiK [C]

Identifier: 118579221

GI number: 118579221

Start: 831182

End: 832243

Strand: Reverse

Name: ydiK [C]

Synonym: Ppro_0783

Alternate gene names: 118579221

Gene position: 832243-831182 (Counterclockwise)

Preceding gene: 118579222

Following gene: 118579220

Centisome position: 20.76

GC content: 60.55

Gene sequence:

>1062_bases
ATGGACCGAACACTACTAAATACGCTATTTGGTTACACTTTCACCCTGCTGATGTGCTACCTGCTCTTCACCATTCTGGC
GCCGTTTCTGACTACCATGGTCTGGGCCGGGACGATCGGAGCCATCAGCTATCCGCTCTACGACAAACTGCTGGCCCGCT
TCCGTTGCCGCGAAAACCTGGCAGCGGTTGCCATGACCACGCTGGTGGTGCTGGCGCTGATCATCCCCCTGGTGGGACTG
ATCTTCACCCTGGCGCGGGAAACGGCCCTGGCCTACCAGTACATTGAGGGTGTAACCAGCGGACAATCCGGCAGTTTCAT
GGAAAGCATCCTGCGCCACCCCCAGGTTTCCCCCCTGCTGGACAGGATCAGGCCGCTGACCGGCTCGTTCAACCTGGAAC
TGGACAGCATGCTCCTGCCGGCGCTCAAGCGCGGGCTGGCCTCCCTGCTGAACTACTCCACCGGAATCGTGAAGAACTTT
CTCGGCTTCCTGATCAAGCTGATGCTGATGCTGATCACCCTCTTCTTCATCTACCGGGACGGCAGGCATTTCCTGAGACG
TTTCTGGCCGGTGGTGGGAATCGACGAAAAGATGCGGGCGACCATTGCCACCACCATTACGCGGGTTCTGGACGCGGTAC
TGTACGGCTTTCTGCTGACCTGTCTGGTGCAGGGGACCCTGGGCGGCCTGGGCTTCTGGGTTGCCGGCCTCCCCTCCCCC
TTCCTGTTCGGCATCCTGATGACCGTCTGCGCGCCGATCCCGCTGATCGGCACCGCCATGATCTGGATGCCGGGCGCCAT
CTACCTGCTGACCCAGGGAAGGATACTGGCCGGCGTTCTGCTGATGGTCTGGAGCGCCGTGGCGGTGAGCGGCATCGACA
ACATCATCCGCCCCCTGTTCATCAGTGGCAGGGCCAAACTCCCCATCCCGGTCGTGATATTCGGGGTTTTGGGGGGGCTT
TTGGCCTTCGGACTGACCGGCGTGGTGGCGGGACCAGTGATCGTAGCGCTCTTCCTGGTGTTCTTCGAATCCTACGGCGA
AAAGGAAATGGCAGAGGAATAG

Upstream 100 bases:

>100_bases
ACTCCGCACCTGCGGCAGGCCTAGACGGACAGGCTGCCCCCAGACGTGGGTGAGCGACATCGCCAACAACGCGCATGCCA
GGCGACCGGGAGGCGTCTTC

Downstream 100 bases:

>100_bases
GCCGACATGGATCGTCCTGCACGCCCCCCCTGCCTCACGCAATTCAAAAGAAAATAGACAGTTACACGGAACTCCGTAGG
GGAAGGGATATGCAAACTAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 353; Mature: 353

Protein sequence:

>353_residues
MDRTLLNTLFGYTFTLLMCYLLFTILAPFLTTMVWAGTIGAISYPLYDKLLARFRCRENLAAVAMTTLVVLALIIPLVGL
IFTLARETALAYQYIEGVTSGQSGSFMESILRHPQVSPLLDRIRPLTGSFNLELDSMLLPALKRGLASLLNYSTGIVKNF
LGFLIKLMLMLITLFFIYRDGRHFLRRFWPVVGIDEKMRATIATTITRVLDAVLYGFLLTCLVQGTLGGLGFWVAGLPSP
FLFGILMTVCAPIPLIGTAMIWMPGAIYLLTQGRILAGVLLMVWSAVAVSGIDNIIRPLFISGRAKLPIPVVIFGVLGGL
LAFGLTGVVAGPVIVALFLVFFESYGEKEMAEE

Sequences:

>Translated_353_residues
MDRTLLNTLFGYTFTLLMCYLLFTILAPFLTTMVWAGTIGAISYPLYDKLLARFRCRENLAAVAMTTLVVLALIIPLVGL
IFTLARETALAYQYIEGVTSGQSGSFMESILRHPQVSPLLDRIRPLTGSFNLELDSMLLPALKRGLASLLNYSTGIVKNF
LGFLIKLMLMLITLFFIYRDGRHFLRRFWPVVGIDEKMRATIATTITRVLDAVLYGFLLTCLVQGTLGGLGFWVAGLPSP
FLFGILMTVCAPIPLIGTAMIWMPGAIYLLTQGRILAGVLLMVWSAVAVSGIDNIIRPLFISGRAKLPIPVVIFGVLGGL
LAFGLTGVVAGPVIVALFLVFFESYGEKEMAEE
>Mature_353_residues
MDRTLLNTLFGYTFTLLMCYLLFTILAPFLTTMVWAGTIGAISYPLYDKLLARFRCRENLAAVAMTTLVVLALIIPLVGL
IFTLARETALAYQYIEGVTSGQSGSFMESILRHPQVSPLLDRIRPLTGSFNLELDSMLLPALKRGLASLLNYSTGIVKNF
LGFLIKLMLMLITLFFIYRDGRHFLRRFWPVVGIDEKMRATIATTITRVLDAVLYGFLLTCLVQGTLGGLGFWVAGLPSP
FLFGILMTVCAPIPLIGTAMIWMPGAIYLLTQGRILAGVLLMVWSAVAVSGIDNIIRPLFISGRAKLPIPVVIFGVLGGL
LAFGLTGVVAGPVIVALFLVFFESYGEKEMAEE

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI1787979, Length=356, Percent_Identity=28.6516853932584, Blast_Score=110, Evalue=1e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 38721; Mature: 38721

Theoretical pI: Translated: 9.30; Mature: 9.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCC
>Mature Secondary Structure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HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]