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The map label for this gene is ytqA [H]

Identifier: 118579048

GI number: 118579048

Start: 644801

End: 645796

Strand: Direct

Name: ytqA [H]

Synonym: Ppro_0609

Alternate gene names: 118579048

Gene position: 644801-645796 (Clockwise)

Preceding gene: 118579047

Following gene: 118579050

Centisome position: 16.09

GC content: 62.95

Gene sequence:

>996_bases
ATGTTTCGGAAACGACAAAGCCGGCTAAATGCCGGCTTTGTCGTTTCCCGCGTTGCGTGCTACAATCACCCCACCATGTC
AAACCCCAAACGCTACAACCCTTTTTCCGCCGAGCTGAAGCGCGTCTTCGGCTGCAAGGTGCAGCGCATCTCCCTGGATG
CCGGTTTTTCCTGTCCCAATCGCGATGGCACCCTTGACCATGCCGGCTGTATCTTCTGCGGCGGACAGGGGTCCGGCTCC
CACGGTATCCTCCGCGATCTTGGTATCGTCGCCCAGCTGGAGGACGGCAAGGAGGTCATGCGCCGCAAGTACCGGGCCTC
CAAGTTCCTGGCCTATTTCCAGGCCTACTCCAATACCTATGCTCCCGTGGAGCGGCTGGGCCTGCTGTTCGGCCAAGCCC
TGCTGACGCCGGACGTTGTCGGCATGATCGTGGCCACGCGGCCGGACTGCCTCCCGCCGGATGTCCTTGATTACCTCTGG
AAACTCTCACAGCAGACCTATTTCTGGCTGGAGCTGGGGTTGCAGTCAATCCACGACACAAGCCTGGCCTATATCAATCG
CCGCCACGATTACGCCTGTTTTCTGCGGGCGGTGGAAGAGTGCCGCTCCCGCAGCCTGCGGGTCTGCGCCCATGTCATCC
TGGGACTGCCGGGCGAGAGCCGCGACGACATGCTGGCCATGGCCGGCGAACTGAACCGGCTCGGCCTGGCCGGCGTCAAG
CTGCATCTGCTGCATGTCATGAAGGGGACGCGGCTGGCGGAGATGCATGCCCGAGGGGAGGTGCCTCTGATGGATAGGGA
TGAGTACGTGGGGCTGGTGTGCGATTTTCTGGAACTGCTCGATCCGGCCATCCTGATCCACCGCCTGACCGGTGACGGCG
GGCGCGACAACCTGGTGGCGCCGCTCTGGTCGCTGAAGAAGTTCGAGGTGCTCAACCTGATCGACGCCGAGCTGGAACGG
CGCGGGAGTTGTCAGGGGAGCCGCCGCGCTGGCTGA

Upstream 100 bases:

>100_bases
GAGGATGTGGCTGCCATCCTGAACGGCACCTACGCCGACCACATGAACTTCGAGTACGCCTTCTCCCGGCCGGATTTCGT
GCGCACATAGCCGGGGCGGA

Downstream 100 bases:

>100_bases
GGCGGGGTGGGGACGCCGGGTGTGGCTGTCCGCCGTTCGCTCCGGATCCCTGATCCTTTGGCTCCACGGCTCATTGCGCT
GCAGCCGGAAAATCGCCCTC

Product: putative radical SAM protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 331; Mature: 331

Protein sequence:

>331_residues
MFRKRQSRLNAGFVVSRVACYNHPTMSNPKRYNPFSAELKRVFGCKVQRISLDAGFSCPNRDGTLDHAGCIFCGGQGSGS
HGILRDLGIVAQLEDGKEVMRRKYRASKFLAYFQAYSNTYAPVERLGLLFGQALLTPDVVGMIVATRPDCLPPDVLDYLW
KLSQQTYFWLELGLQSIHDTSLAYINRRHDYACFLRAVEECRSRSLRVCAHVILGLPGESRDDMLAMAGELNRLGLAGVK
LHLLHVMKGTRLAEMHARGEVPLMDRDEYVGLVCDFLELLDPAILIHRLTGDGGRDNLVAPLWSLKKFEVLNLIDAELER
RGSCQGSRRAG

Sequences:

>Translated_331_residues
MFRKRQSRLNAGFVVSRVACYNHPTMSNPKRYNPFSAELKRVFGCKVQRISLDAGFSCPNRDGTLDHAGCIFCGGQGSGS
HGILRDLGIVAQLEDGKEVMRRKYRASKFLAYFQAYSNTYAPVERLGLLFGQALLTPDVVGMIVATRPDCLPPDVLDYLW
KLSQQTYFWLELGLQSIHDTSLAYINRRHDYACFLRAVEECRSRSLRVCAHVILGLPGESRDDMLAMAGELNRLGLAGVK
LHLLHVMKGTRLAEMHARGEVPLMDRDEYVGLVCDFLELLDPAILIHRLTGDGGRDNLVAPLWSLKKFEVLNLIDAELER
RGSCQGSRRAG
>Mature_331_residues
MFRKRQSRLNAGFVVSRVACYNHPTMSNPKRYNPFSAELKRVFGCKVQRISLDAGFSCPNRDGTLDHAGCIFCGGQGSGS
HGILRDLGIVAQLEDGKEVMRRKYRASKFLAYFQAYSNTYAPVERLGLLFGQALLTPDVVGMIVATRPDCLPPDVLDYLW
KLSQQTYFWLELGLQSIHDTSLAYINRRHDYACFLRAVEECRSRSLRVCAHVILGLPGESRDDMLAMAGELNRLGLAGVK
LHLLHVMKGTRLAEMHARGEVPLMDRDEYVGLVCDFLELLDPAILIHRLTGDGGRDNLVAPLWSLKKFEVLNLIDAELER
RGSCQGSRRAG

Specific function: Unknown

COG id: COG1242

COG function: function code R; Predicted Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the radical SAM superfamily [H]

Homologues:

Organism=Escherichia coli, GI2367204, Length=303, Percent_Identity=38.2838283828383, Blast_Score=217, Evalue=7e-58,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR005911
- InterPro:   IPR006638
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 37088; Mature: 37088

Theoretical pI: Translated: 8.60; Mature: 8.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRKRQSRLNAGFVVSRVACYNHPTMSNPKRYNPFSAELKRVFGCKVQRISLDAGFSCPN
CCCCHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCEEEEEEECCCCCCCC
RDGTLDHAGCIFCGGQGSGSHGILRDLGIVAQLEDGKEVMRRKYRASKFLAYFQAYSNTY
CCCCCCCCCEEEECCCCCCCCCHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHCCCC
APVERLGLLFGQALLTPDVVGMIVATRPDCLPPDVLDYLWKLSQQTYFWLELGLQSIHDT
CHHHHHHHHHHHHHHCHHHHHHEEECCCCCCCHHHHHHHHHHCCCEEEHHHHHHHHHHHH
SLAYINRRHDYACFLRAVEECRSRSLRVCAHVILGLPGESRDDMLAMAGELNRLGLAGVK
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCHHHCCHHHHH
LHLLHVMKGTRLAEMHARGEVPLMDRDEYVGLVCDFLELLDPAILIHRLTGDGGRDNLVA
HHHHHHHCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCCHH
PLWSLKKFEVLNLIDAELERRGSCQGSRRAG
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MFRKRQSRLNAGFVVSRVACYNHPTMSNPKRYNPFSAELKRVFGCKVQRISLDAGFSCPN
CCCCHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCEEEEEEECCCCCCCC
RDGTLDHAGCIFCGGQGSGSHGILRDLGIVAQLEDGKEVMRRKYRASKFLAYFQAYSNTY
CCCCCCCCCEEEECCCCCCCCCHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHCCCC
APVERLGLLFGQALLTPDVVGMIVATRPDCLPPDVLDYLWKLSQQTYFWLELGLQSIHDT
CHHHHHHHHHHHHHHCHHHHHHEEECCCCCCCHHHHHHHHHHCCCEEEHHHHHHHHHHHH
SLAYINRRHDYACFLRAVEECRSRSLRVCAHVILGLPGESRDDMLAMAGELNRLGLAGVK
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCHHHCCHHHHH
LHLLHVMKGTRLAEMHARGEVPLMDRDEYVGLVCDFLELLDPAILIHRLTGDGGRDNLVA
HHHHHHHCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCCHH
PLWSLKKFEVLNLIDAELERRGSCQGSRRAG
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]